BLASTX nr result
ID: Rauwolfia21_contig00057551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00057551
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 65 9e-18
emb|CAN74213.1| hypothetical protein VITISV_000550 [Vitis vinifera] 66 5e-17
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 62 1e-16
emb|CAN78061.1| hypothetical protein VITISV_003933 [Vitis vinifera] 61 3e-16
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 59 8e-16
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 61 1e-15
emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera] 61 1e-15
emb|CAN64689.1| hypothetical protein VITISV_030189 [Vitis vinifera] 61 1e-15
emb|CAN71691.1| hypothetical protein VITISV_039294 [Vitis vinifera] 60 2e-15
emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera] 59 4e-15
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 58 6e-15
ref|XP_004288697.1| PREDICTED: uncharacterized protein LOC101308... 58 7e-15
ref|XP_004301938.1| PREDICTED: uncharacterized protein LOC101304... 61 7e-15
emb|CAN68953.1| hypothetical protein VITISV_016199 [Vitis vinifera] 59 9e-15
emb|CAN61279.1| hypothetical protein VITISV_005751 [Vitis vinifera] 57 1e-14
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 59 2e-14
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 59 2e-14
emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera] 61 2e-14
ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292... 59 2e-14
emb|CAN71212.1| hypothetical protein VITISV_041614 [Vitis vinifera] 57 4e-14
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 65.5 bits (158), Expect(2) = 9e-18
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGENK 240
G +++GIYV Y+S SII YLE +TGD+FK RFADC+FDE V+ GE+K
Sbjct: 145 GPQRRLGIYVGYESPSIIKYLEPMTGDLFKVRFADCHFDESVYPTLGGEHK 195
Score = 50.1 bits (118), Expect(2) = 9e-18
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +2
Query: 2 FGFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
FG E NISHLR+F CAVYV I Q TKMG QRRL
Sbjct: 116 FGQEPNISHLRVFGCAVYVPIAPPQRTKMGPQRRL 150
>emb|CAN74213.1| hypothetical protein VITISV_000550 [Vitis vinifera]
Length = 193
Score = 65.9 bits (159), Expect(2) = 5e-17
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGEN 237
GF +++GIYV +DS SII YLE L GDVF RFADC+F+E VF GEN
Sbjct: 138 GFQRRLGIYVGFDSPSIIRYLEPLIGDVFTARFADCHFNESVFPSLGGEN 187
Score = 47.4 bits (111), Expect(2) = 5e-17
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 110 GKQPNISHLRIFGCAVYVPIAPTQCTKMGFQRRL 143
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 61.6 bits (148), Expect(2) = 1e-16
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++GIYV YDS +II Y+E LTGD+F RFADC+FDE VF
Sbjct: 743 GPQRRLGIYVGYDSPTIIRYIEPLTGDLFTARFADCHFDETVF 785
Score = 50.1 bits (118), Expect(2) = 1e-16
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G+E N+SHLRIF CAVYV I Q TKMG QRRL
Sbjct: 715 GYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRL 748
>emb|CAN78061.1| hypothetical protein VITISV_003933 [Vitis vinifera]
Length = 259
Score = 60.8 bits (146), Expect(2) = 3e-16
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTGDVF RFADC+F+E VF
Sbjct: 174 GPQRRLGVYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVF 216
Score = 49.7 bits (117), Expect(2) = 3e-16
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV IT Q TKMG QRRL
Sbjct: 146 GKQPNISHLRIFGCAVYVPITPTQRTKMGPQRRL 179
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 58.9 bits (141), Expect(2) = 8e-16
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV YDS +II Y+E L GD+F RFADC+FDE VF
Sbjct: 686 GPQRRLGVYVGYDSPTIIRYIEPLIGDLFTARFADCHFDETVF 728
Score = 50.1 bits (118), Expect(2) = 8e-16
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G+E N+SHLRIF CAVYV I Q TKMG QRRL
Sbjct: 658 GYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRL 691
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 60.8 bits (146), Expect(2) = 1e-15
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTGDVF RFADC+F+E VF
Sbjct: 713 GPQRRLGVYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVF 755
Score = 47.8 bits (112), Expect(2) = 1e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 685 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 718
>emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera]
Length = 361
Score = 60.8 bits (146), Expect(2) = 1e-15
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTGDVF RFADC+F+E VF
Sbjct: 239 GPQRRLGVYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVF 281
Score = 47.8 bits (112), Expect(2) = 1e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 211 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 244
>emb|CAN64689.1| hypothetical protein VITISV_030189 [Vitis vinifera]
Length = 292
Score = 60.8 bits (146), Expect(2) = 1e-15
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTGDVF RFADC+F+E VF
Sbjct: 238 GPQRRLGVYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVF 280
Score = 47.8 bits (112), Expect(2) = 1e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 210 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 243
>emb|CAN71691.1| hypothetical protein VITISV_039294 [Vitis vinifera]
Length = 337
Score = 60.1 bits (144), Expect(2) = 2e-15
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTG+VF RFADC+F+E VF
Sbjct: 215 GPQRRLGVYVGFDSPSIIXYLEPLTGBVFTARFADCHFNESVF 257
Score = 47.8 bits (112), Expect(2) = 2e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 187 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 220
>emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera]
Length = 333
Score = 58.9 bits (141), Expect(2) = 4e-15
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LTGD F RFADC+F+E VF
Sbjct: 238 GPQRRLGVYVGFDSPSIIRYLEPLTGDXFTARFADCHFNESVF 280
Score = 47.8 bits (112), Expect(2) = 4e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 210 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 243
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 58.2 bits (139), Expect(2) = 6e-15
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE LT DVF RFADC+F+E VF
Sbjct: 715 GPQRRLGVYVGFDSPSIIRYLEPLTDDVFTARFADCHFNESVF 757
Score = 47.8 bits (112), Expect(2) = 6e-15
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 687 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 720
>ref|XP_004288697.1| PREDICTED: uncharacterized protein LOC101308809 [Fragaria vesca
subsp. vesca]
Length = 572
Score = 58.2 bits (139), Expect(2) = 7e-15
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGE 234
G +++GIYV Y+S +II YLE LT D+F RF DC+FDE +F EG+
Sbjct: 297 GPQRRLGIYVGYESPTIIRYLEPLTSDLFTARFTDCHFDETLFPSLEGD 345
Score = 47.8 bits (112), Expect(2) = 7e-15
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G+E +ISHLRIF C+VYV IT Q +KMG QRRL
Sbjct: 269 GYEPDISHLRIFGCSVYVPITPPQRSKMGPQRRL 302
>ref|XP_004301938.1| PREDICTED: uncharacterized protein LOC101304199 [Fragaria vesca
subsp. vesca]
Length = 569
Score = 60.8 bits (146), Expect(2) = 7e-15
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGE 234
G +++GIYV Y+S +II YLE LTGD+F RFADC+FDE +F G+
Sbjct: 420 GPQRRLGIYVGYESPTIIRYLEPLTGDLFTARFADCHFDETLFLSLRGD 468
Score = 45.1 bits (105), Expect(2) = 7e-15
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G+E +ISHLRIF C+VYV IT +KMG QRRL
Sbjct: 392 GYEPDISHLRIFGCSVYVPITPPLRSKMGPQRRL 425
>emb|CAN68953.1| hypothetical protein VITISV_016199 [Vitis vinifera]
Length = 952
Score = 58.9 bits (141), Expect(2) = 9e-15
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGEN 237
G +++ IYV +DS II YLE LT DVF TRFADC+F+E VF GEN
Sbjct: 456 GSQRRLEIYVGFDSPFIIRYLEPLTDDVFTTRFADCHFNESVFPSLGGEN 505
Score = 46.6 bits (109), Expect(2) = 9e-15
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRLE 109
G + NISHL +F C VYV I Q TKMGSQRRLE
Sbjct: 428 GKQPNISHLLVFGCTVYVPIALTQRTKMGSQRRLE 462
>emb|CAN61279.1| hypothetical protein VITISV_005751 [Vitis vinifera]
Length = 181
Score = 57.0 bits (136), Expect(2) = 1e-14
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGE 234
G +++GIYV +DS SII YLE LTG+VF FADC+F+E VF GE
Sbjct: 128 GPQRRLGIYVGFDSPSIIRYLEPLTGNVFTACFADCHFNESVFSLLGGE 176
Score = 47.8 bits (112), Expect(2) = 1e-14
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG QRRL
Sbjct: 100 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRL 133
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 58.5 bits (140), Expect(2) = 2e-14
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G+YV +DS SII YLE L GDVF RFADC+F+E VF
Sbjct: 616 GPQRRLGVYVGFDSPSIIXYLEPLXGDVFTARFADCHFNESVF 658
Score = 45.8 bits (107), Expect(2) = 2e-14
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NI HLRIF CAVYV I Q TKMG QRRL
Sbjct: 588 GKQPNIXHLRIFGCAVYVPIAPTQXTKMGPQRRL 621
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 58.9 bits (141), Expect(2) = 2e-14
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++G YV +DS SII YLE LTGDVF RFADC+F+E VF
Sbjct: 382 GPXRRLGXYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVF 424
Score = 45.4 bits (106), Expect(2) = 2e-14
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHLRIF CAVYV I Q TKMG RRL
Sbjct: 354 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPXRRL 387
>emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera]
Length = 1140
Score = 61.2 bits (147), Expect(2) = 2e-14
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +1
Query: 91 FSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGE 234
F +++ IYV +DS SII YLE LTGDVF RFADC+F+E VF GE
Sbjct: 580 FQRRLRIYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLRGE 627
Score = 43.1 bits (100), Expect(2) = 2e-14
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G + NISHL+IF CAVYV I Q TKM QRRL
Sbjct: 551 GKQPNISHLQIFGCAVYVPIAPTQRTKMDFQRRL 584
>ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292366 [Fragaria vesca
subsp. vesca]
Length = 611
Score = 59.3 bits (142), Expect(2) = 2e-14
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVF 216
G +++GIYV Y+S +II YLE LTGD+F RF DC+FDE +F
Sbjct: 67 GHQRRLGIYVGYESPTIIRYLEPLTGDLFTARFVDCHFDETLF 109
Score = 45.1 bits (105), Expect(2) = 2e-14
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRL 106
G+E +ISHLRIF C+VYV IT +KMG QRRL
Sbjct: 39 GYEPDISHLRIFGCSVYVPITPPLRSKMGHQRRL 72
>emb|CAN71212.1| hypothetical protein VITISV_041614 [Vitis vinifera]
Length = 347
Score = 56.6 bits (135), Expect(2) = 4e-14
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +1
Query: 88 GFSKKIGIYVRYDSSSIISYLESLTGDVFKTRFADCYFDEYVFCK*EGE 234
G +++G YV +DS II YLE LTGDVF RFADC+F+ VF GE
Sbjct: 238 GPQRRLGFYVGFDSPXIIRYLEPLTGDVFTARFADCHFNXSVFPSLXGE 286
Score = 46.6 bits (109), Expect(2) = 4e-14
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2
Query: 5 GFESNISHLRIFRCAVYVSITHNQ*TKMGSQRRLEY 112
G + NISHLRIF C VYV I Q TKMG QRRL +
Sbjct: 210 GKQPNISHLRIFGCVVYVXIAPTQRTKMGPQRRLGF 245