BLASTX nr result

ID: Rauwolfia21_contig00057465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00057465
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381587.1| AP2 domain-containing transcription factor f...    57   2e-06
ref|XP_002326298.1| AP2/ERF domain-containing transcription fact...    57   2e-06

>ref|XP_006381587.1| AP2 domain-containing transcription factor family protein [Populus
           trichocarpa] gi|550336294|gb|ERP59384.1| AP2
           domain-containing transcription factor family protein
           [Populus trichocarpa]
          Length = 209

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 411 ELRADSPCPSV-SDGAVHVENDMSEIPLDTAFLDNLSIMG-----TENNVAXXXXXXXXX 250
           E RA+SPCPSV SDG V +E    E+  D  FLD L   G     TE  +          
Sbjct: 121 ESRAESPCPSVVSDGTVQMEG--GELMWDGPFLDMLMNTGSCNHSTEYGIFQGFDDLYSD 178

Query: 249 XXFASPLPNIDYGEENYEGFSSSQGSFLWNF 157
               S +PN+DYGEE        QGSFLWNF
Sbjct: 179 FFPPSLIPNLDYGEETNLDGVLEQGSFLWNF 209


>ref|XP_002326298.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372128|gb|ABQ62995.1| RAP2-like
           protein [Populus trichocarpa]
          Length = 209

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 411 ELRADSPCPSV-SDGAVHVENDMSEIPLDTAFLDNLSIMG-----TENNVAXXXXXXXXX 250
           E RA+SPCPSV SDG V +E    E+  D  FLD L   G     TE  +          
Sbjct: 121 ESRAESPCPSVVSDGTVQMEG--GELMWDGPFLDMLMNTGSCNHSTEYGIFQGFDDLYND 178

Query: 249 XXFASPLPNIDYGEENYEGFSSSQGSFLWNF 157
               S +PN+DYGEE        QGSFLWNF
Sbjct: 179 FFPPSLIPNLDYGEETNLDGVLEQGSFLWNF 209


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