BLASTX nr result
ID: Rauwolfia21_contig00056827
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00056827 (391 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363976.1| PREDICTED: uncharacterized protein LOC102596... 55 3e-08 ref|XP_004235296.1| PREDICTED: uncharacterized protein LOC101251... 52 3e-07 ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp.... 59 9e-07 ref|NP_190452.1| polynucleotide adenylyltransferase domain and R... 57 3e-06 ref|XP_004297502.1| PREDICTED: uncharacterized protein LOC101314... 53 3e-06 >ref|XP_006363976.1| PREDICTED: uncharacterized protein LOC102596961 [Solanum tuberosum] Length = 507 Score = 55.5 bits (132), Expect(2) = 3e-08 Identities = 28/58 (48%), Positives = 40/58 (68%) Frame = +1 Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387 V ++C+AAI+A +E D +G + +EWK+ SK+LGIS+S I+RPTRVVLN Sbjct: 24 VFMSCSAAIEAIEEID----------SGNEPAEWKRFNSKELGISSSMIARPTRVVLN 71 Score = 27.7 bits (60), Expect(2) = 3e-08 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 116 MAISTALGFCCRPHVFLRSPLR 181 MAIST F CRPH L +R Sbjct: 1 MAISTGFAFSCRPHFPLSQSMR 22 >ref|XP_004235296.1| PREDICTED: uncharacterized protein LOC101251959 [Solanum lycopersicum] Length = 507 Score = 52.0 bits (123), Expect(2) = 3e-07 Identities = 27/58 (46%), Positives = 40/58 (68%) Frame = +1 Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387 V ++ +AAI+A +E D +G++ +EWK+ SK+LGIS+S I+RPTRVVLN Sbjct: 24 VFMSFSAAIEAIEEID----------SGKEPAEWKRFNSKELGISSSMIARPTRVVLN 71 Score = 27.7 bits (60), Expect(2) = 3e-07 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 116 MAISTALGFCCRPHVFLRSPLR 181 MAIST F CRPH L +R Sbjct: 1 MAISTGFAFSCRPHFPLSQSMR 22 >ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297321766|gb|EFH52187.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 610 Score = 58.5 bits (140), Expect = 9e-07 Identities = 30/53 (56%), Positives = 38/53 (71%) Frame = +1 Query: 229 AAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387 AAAI+ D+ D + +G S KA EWKKL SKDLGI++S IS+PTR+VLN Sbjct: 33 AAAIETVDDKDSDHLEKG-SDRTSKAPEWKKLNSKDLGITSSMISKPTRLVLN 84 >ref|NP_190452.1| polynucleotide adenylyltransferase domain and RNA recognition motif-containing protein [Arabidopsis thaliana] gi|7576221|emb|CAB87911.1| putative protein [Arabidopsis thaliana] gi|332644940|gb|AEE78461.1| polynucleotide adenylyltransferase domain and RNA recognition motif-containing protein [Arabidopsis thaliana] Length = 881 Score = 57.0 bits (136), Expect = 3e-06 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%) Frame = +1 Query: 214 VRLNC-AAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387 V+LN AAA++ D+ D + S KA EWKKL SKDLGI+ S IS+PTR+VLN Sbjct: 27 VQLNTVAAAMETVDDKDSDHHHDKGSNKTSKAPEWKKLNSKDLGITTSMISKPTRIVLN 85 >ref|XP_004297502.1| PREDICTED: uncharacterized protein LOC101314744 [Fragaria vesca subsp. vesca] Length = 515 Score = 52.8 bits (125), Expect(2) = 3e-06 Identities = 28/58 (48%), Positives = 39/58 (67%) Frame = +1 Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387 V+LN +A++A DE +G S+ + KA +WKKL SK+LGIS+S I +P R VLN Sbjct: 30 VQLNLVSAMEAIDEQEGC--SKDNNSRDGKALQWKKLNSKELGISSSMIDKPIRKVLN 85 Score = 23.9 bits (50), Expect(2) = 3e-06 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 116 MAISTALGFCCRPHVFLRSP 175 MAIS+ L F CRP LR+P Sbjct: 1 MAISS-LSFACRPSFSLRTP 19