BLASTX nr result

ID: Rauwolfia21_contig00056827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00056827
         (391 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363976.1| PREDICTED: uncharacterized protein LOC102596...    55   3e-08
ref|XP_004235296.1| PREDICTED: uncharacterized protein LOC101251...    52   3e-07
ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp....    59   9e-07
ref|NP_190452.1| polynucleotide adenylyltransferase domain and R...    57   3e-06
ref|XP_004297502.1| PREDICTED: uncharacterized protein LOC101314...    53   3e-06

>ref|XP_006363976.1| PREDICTED: uncharacterized protein LOC102596961 [Solanum tuberosum]
          Length = 507

 Score = 55.5 bits (132), Expect(2) = 3e-08
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +1

Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387
           V ++C+AAI+A +E D          +G + +EWK+  SK+LGIS+S I+RPTRVVLN
Sbjct: 24  VFMSCSAAIEAIEEID----------SGNEPAEWKRFNSKELGISSSMIARPTRVVLN 71



 Score = 27.7 bits (60), Expect(2) = 3e-08
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 116 MAISTALGFCCRPHVFLRSPLR 181
           MAIST   F CRPH  L   +R
Sbjct: 1   MAISTGFAFSCRPHFPLSQSMR 22


>ref|XP_004235296.1| PREDICTED: uncharacterized protein LOC101251959 [Solanum
           lycopersicum]
          Length = 507

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 27/58 (46%), Positives = 40/58 (68%)
 Frame = +1

Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387
           V ++ +AAI+A +E D          +G++ +EWK+  SK+LGIS+S I+RPTRVVLN
Sbjct: 24  VFMSFSAAIEAIEEID----------SGKEPAEWKRFNSKELGISSSMIARPTRVVLN 71



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 116 MAISTALGFCCRPHVFLRSPLR 181
           MAIST   F CRPH  L   +R
Sbjct: 1   MAISTGFAFSCRPHFPLSQSMR 22


>ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321766|gb|EFH52187.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/53 (56%), Positives = 38/53 (71%)
 Frame = +1

Query: 229 AAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387
           AAAI+  D+ D   + +G S    KA EWKKL SKDLGI++S IS+PTR+VLN
Sbjct: 33  AAAIETVDDKDSDHLEKG-SDRTSKAPEWKKLNSKDLGITSSMISKPTRLVLN 84


>ref|NP_190452.1| polynucleotide adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|7576221|emb|CAB87911.1| putative protein [Arabidopsis
           thaliana] gi|332644940|gb|AEE78461.1| polynucleotide
           adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 881

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 214 VRLNC-AAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387
           V+LN  AAA++  D+ D     +  S    KA EWKKL SKDLGI+ S IS+PTR+VLN
Sbjct: 27  VQLNTVAAAMETVDDKDSDHHHDKGSNKTSKAPEWKKLNSKDLGITTSMISKPTRIVLN 85


>ref|XP_004297502.1| PREDICTED: uncharacterized protein LOC101314744 [Fragaria vesca
           subsp. vesca]
          Length = 515

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +1

Query: 214 VRLNCAAAIQAFDEADGSKISEGISGNGRKASEWKKLKSKDLGISNSRISRPTRVVLN 387
           V+LN  +A++A DE +G   S+  +    KA +WKKL SK+LGIS+S I +P R VLN
Sbjct: 30  VQLNLVSAMEAIDEQEGC--SKDNNSRDGKALQWKKLNSKELGISSSMIDKPIRKVLN 85



 Score = 23.9 bits (50), Expect(2) = 3e-06
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 116 MAISTALGFCCRPHVFLRSP 175
           MAIS+ L F CRP   LR+P
Sbjct: 1   MAISS-LSFACRPSFSLRTP 19


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