BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00056539
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...    69   8e-10
ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citr...    65   1e-08
gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theo...    64   2e-08
ref|XP_006855329.1| hypothetical protein AMTR_s00057p00087430 [A...    58   1e-06
ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004491978.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...    57   3e-06
ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Sela...    57   3e-06
ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Sela...    57   3e-06
emb|CBI36364.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Popu...    56   4e-06
gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protei...    56   4e-06
ref|XP_004303223.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
emb|CBI16904.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002529622.1| pentatricopeptide repeat-containing protein,...    56   4e-06
ref|XP_002331286.1| predicted protein [Populus trichocarpa]            56   4e-06

>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 702

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGS-KPDVYTNNHLLSMYLKLNHLDYAQKVFD 267
           M+F  LIR C   KS+ NGK++HA+L+  GS K D++TNNHLL+MYLKLN  D AQ++FD
Sbjct: 1   MSFIQLIRGCTSSKSLFNGKSLHAQLLKLGSLKADIFTNNHLLTMYLKLNQFDDAQQLFD 60

Query: 268 RM 273
           RM
Sbjct: 61  RM 62


>ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Solanum tuberosum]
          Length = 702

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSK-PDVYTNNHLLSMYLKLNHLDYAQKVFD 267
           M+F  L+R C   KS+ NGK++HA+L+  GS+  D++TNNHLL+MYLKLN LD AQ++FD
Sbjct: 1   MSFIQLLRGCTSSKSLFNGKSLHAQLLKLGSQNADIFTNNHLLTMYLKLNQLDDAQQLFD 60

Query: 268 RM 273
           RM
Sbjct: 61  RM 62


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 30/59 (50%), Positives = 44/59 (74%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ +I+ C D  S++ GK  HA++IVSG  PDVY +N L+ MYL+ +HL+YA KVF++M
Sbjct: 46  FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104


>ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citrus clementina]
           gi|567888250|ref|XP_006436647.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
           gi|568878438|ref|XP_006492198.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|557538842|gb|ESR49886.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
           gi|557538843|gb|ESR49887.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
          Length = 697

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           M+F+ L+R   D K I  G+T+HAK+I SG  P+V T NHLL MY+K + ++ AQK+FD 
Sbjct: 1   MSFSRLLRLFGDSKCILKGRTLHAKMITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDE 60

Query: 271 M 273
           M
Sbjct: 61  M 61


>gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 671

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/60 (51%), Positives = 42/60 (70%)
 Frame = +1

Query: 94  NFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           +F+ L R   D +SI+NG  +HAK+I S    D+YTNNHLL+MY+K N +  A+KVFD M
Sbjct: 3   SFSRLFRLLGDTRSIRNGIALHAKIITSQISRDIYTNNHLLAMYVKFNRIVDARKVFDGM 62


>ref|XP_006855329.1| hypothetical protein AMTR_s00057p00087430 [Amborella trichopoda]
           gi|548859095|gb|ERN16796.1| hypothetical protein
           AMTR_s00057p00087430 [Amborella trichopoda]
          Length = 734

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           M  +SLIR+    +S+  GK +HA LI SG   +VY NNHL+SMY++   L+ A  VFD+
Sbjct: 1   MLLSSLIRTLGHAQSLSKGKMLHANLITSGFPANVYINNHLMSMYVRCGCLNDAHSVFDQ 60

Query: 271 M 273
           M
Sbjct: 61  M 61


>ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/61 (40%), Positives = 40/61 (65%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           + F+ +++ C + K++  GK VH ++IV+G  P +Y  N LL  Y K + ++YA KVFDR
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 271 M 273
           M
Sbjct: 67  M 67


>ref|XP_004491978.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cicer arietinum]
          Length = 880

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/61 (39%), Positives = 40/61 (65%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           + F+ + + C + KS+  GK  HA++IV+G  P +Y +N LL  Y K ++++YA  VFD+
Sbjct: 34  LTFSHIFQKCSNLKSLNPGKQAHAQMIVTGFVPTIYVSNCLLQFYCKCSNMNYAFNVFDK 93

Query: 271 M 273
           M
Sbjct: 94  M 94


>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +1

Query: 40  TP*PKNLLPVICATLGSMNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLS 219
           +P P ++     + +  + ++SLI+ CID  S Q GK++H ++I +G  PD Y    +L 
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM 114

Query: 220 MYLK---LNHLDYAQKVFDRM 273
           +Y +   L+ L YA+K+F+ M
Sbjct: 115 LYARSGCLDDLCYARKLFEEM 135


>ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
           gi|300158197|gb|EFJ24820.1| hypothetical protein
           SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           + FAS++ +C    +++ GK VHA++  +G KPD+   N L+S+Y K   +D A+KVFDR
Sbjct: 372 ITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDR 431

Query: 271 M 273
           M
Sbjct: 432 M 432


>ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
           gi|300148766|gb|EFJ15424.1| hypothetical protein
           SELMODRAFT_118230 [Selaginella moellendorffii]
          Length = 506

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 91  MNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDR 270
           + FAS++ +C    +++ GK VHA++  +G KPD+   N L+S+Y K   +D A+KVFDR
Sbjct: 162 ITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDR 221

Query: 271 M 273
           M
Sbjct: 222 M 222


>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +1

Query: 40  TP*PKNLLPVICATLGSMNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLS 219
           +P P ++     + +  + ++SLI+ CID  S Q GK++H ++I +G  PD Y    +L 
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM 114

Query: 220 MYLK---LNHLDYAQKVFDRM 273
           +Y +   L+ L YA+K+F+ M
Sbjct: 115 LYARSGCLDDLCYARKLFEEM 135


>ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Populus trichocarpa]
           gi|550340791|gb|ERP62042.1| hypothetical protein
           POPTR_0004s11010g [Populus trichocarpa]
          Length = 897

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 38/59 (64%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C  + S+  GK  HA++I  G +P  + +N L+ MY+K  +LDYA KVFD+M
Sbjct: 52  FSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110


>gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 860

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C ++ S+  GK  H ++I+SG  P ++  N L+ +Y+K  +L YA KVFDRM
Sbjct: 45  FSHIFQECSNQTSLNPGKQAHCQMIISGFIPTIFVANCLIQLYIKCGNLGYANKVFDRM 103


>ref|XP_004303223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Fragaria vesca subsp. vesca]
          Length = 857

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 37/59 (62%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C   +++  GK  HA++++SG  P V+ +N L+ MYLK   L YA KVFD M
Sbjct: 30  FSQIFQQCAHGRALHPGKQAHARMLISGFDPTVFVSNCLIQMYLKCRVLRYAAKVFDEM 88


>ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Solanum lycopersicum]
          Length = 858

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 39/59 (66%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C    + Q G+  HA++I+SG +P V+  N L+ MY+K ++L YA KVFD+M
Sbjct: 27  FSHIYQECAKHCTQQPGRQAHARMIISGFQPTVFVTNCLIQMYVKCSNLGYADKVFDKM 85


>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C D+K++  GK  HA++I++  KP V+  N L+ MY+K + L++A KVFD M
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103


>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C D+K++  GK  HA++I++  KP V+  N L+ MY+K + L++A KVFD M
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103


>ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530907|gb|EEF32767.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 752

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/65 (41%), Positives = 42/65 (64%)
 Frame = +1

Query: 79  TLGSMNFASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQK 258
           TL   ++  LI+  I  +    G+ VH+ L+ +GS+ D +  N++L++Y+K N LD AQK
Sbjct: 64  TLLFNDWPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQK 123

Query: 259 VFDRM 273
           VFDRM
Sbjct: 124 VFDRM 128


>ref|XP_002331286.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 38/59 (64%)
 Frame = +1

Query: 97  FASLIRSCIDKKSIQNGKTVHAKLIVSGSKPDVYTNNHLLSMYLKLNHLDYAQKVFDRM 273
           F+ + + C  + S+  GK  HA++I  G +P  + +N L+ MY+K  +LDYA KVFD+M
Sbjct: 52  FSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110