BLASTX nr result

ID: Rauwolfia21_contig00056148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00056148
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus tr...    43   9e-06

>ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus trichocarpa]
           gi|134093271|ref|YP_001109572.1| hypothetical protein
           Poptr_cp095 [Populus trichocarpa]
           gi|133712108|gb|ABO36751.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712133|gb|ABO36776.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 61

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -2

Query: 171 WSISIDWACHIGPSWTSKCF*FELSGECLRYIKKMNNQT 55
           WSISID +CHIGPS TS CF      + L  + + N Q+
Sbjct: 10  WSISIDRSCHIGPSQTSNCFDLNYPEDALSILYQKNGQS 48



 Score = 32.3 bits (72), Expect(2) = 9e-06
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -1

Query: 82  IYQKDEQSNLFLDLIKA*RGE 20
           +YQK+ QSNLFLD I+A RGE
Sbjct: 41  LYQKNGQSNLFLDSIEAKRGE 61


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