BLASTX nr result

ID: Rauwolfia21_contig00056106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00056106
         (276 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302060.1| hypothetical protein POPTR_0002s04250g [Popu...    70   2e-10
gb|EOX94522.1| C2H2 and C2HC zinc fingers superfamily protein, p...    65   9e-09
ref|XP_002306831.1| hypothetical protein POPTR_0005s24290g [Popu...    63   4e-08

>ref|XP_002302060.1| hypothetical protein POPTR_0002s04250g [Populus trichocarpa]
           gi|222843786|gb|EEE81333.1| hypothetical protein
           POPTR_0002s04250g [Populus trichocarpa]
          Length = 184

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   GHMNIHRKDRARNKPNTIN--TNKHEENYTGPRFYQQIPSCSSHLLAPHEAVQIEYRTYF 175
           GHMNIHRKDRA+++P+++   ++K +E+Y   + Y  I S   H   PHE V I Y+T+F
Sbjct: 50  GHMNIHRKDRAKSRPSSVPSLSSKVDEDYASFQGYPPIQSYPPHYPTPHE-VHINYQTFF 108

Query: 176 PASAS-GVRPSFA-NHRSILYDHSQHRFNPFGVD 271
           PAS + G+   +A  H    Y  S H   PFG D
Sbjct: 109 PASTTWGIGSPYAQQHNGDFYVQSPHHLYPFGDD 142


>gb|EOX94522.1| C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma
           cacao]
          Length = 182

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = +2

Query: 2   GHMNIHRKDRARNKPNTIN--TNKHEEN--YTGPRFYQQIPSCSSHLLAPHEAVQIEYRT 169
           GHMNIHRKDRA+++P+++   + K +EN  Y     Y   P  S    +    V + Y+ 
Sbjct: 49  GHMNIHRKDRAKSRPSSVPIVSGKADENLNYASLMSYSYPPIQSQPHYSMVPEVHVSYQA 108

Query: 170 YFPASASGVRPSFANHRSILY-DHSQHRFNPFGVD 271
           +FPA   G RP   +H   LY D+SQH  NPFG D
Sbjct: 109 FFPAPGWGFRPPHTHHSDELYVDNSQH-LNPFGED 142


>ref|XP_002306831.1| hypothetical protein POPTR_0005s24290g [Populus trichocarpa]
           gi|222856280|gb|EEE93827.1| hypothetical protein
           POPTR_0005s24290g [Populus trichocarpa]
          Length = 185

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   GHMNIHRKDRARNKPNTIN--TNKHEENYTGPRFYQQIPSCSSHLLAPHEAVQIEYRTYF 175
           GHMNIHRKDRA+++P+++   ++K +E++   R Y  + S  +H   PHE V   Y+T+F
Sbjct: 50  GHMNIHRKDRAKSRPSSVPSFSSKVDEDFPSFRGYPPLQSYPAHYPTPHE-VHTNYQTFF 108

Query: 176 PASAS-GVRPSFA-NHRSILYDHSQHRFNPFGVD 271
           P S++ G+   +A  H    Y  +     PFG D
Sbjct: 109 PLSSTWGIGSPYAQQHNGDFYAQTPQHLYPFGED 142


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