BLASTX nr result
ID: Rauwolfia21_contig00055669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00055669
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citr... 119 3e-25
gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theo... 113 2e-23
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g... 89 8e-16
gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japo... 89 8e-16
ref|XP_004306267.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Popu... 84 1e-14
gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indi... 83 3e-14
ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group] g... 83 4e-14
gb|EAY72952.1| hypothetical protein OsI_00823 [Oryza sativa Indi... 83 4e-14
ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ... 82 6e-14
ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group] g... 81 1e-13
gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japo... 81 1e-13
gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indi... 81 1e-13
ref|XP_002320797.2| hypothetical protein POPTR_0014s02950g [Popu... 81 2e-13
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar... 80 2e-13
ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum lycopersicum]
Length = 702
Score = 130 bits (326), Expect = 2e-28
Identities = 56/89 (62%), Positives = 74/89 (83%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
E+ VG+Q+H I+K GF++F+FVCNA+LDFY KS FEESLK+F EM +QD+VSWN+++A
Sbjct: 320 EVRVGKQIHCRIVKMGFDSFSFVCNALLDFYSKSDLFEESLKLFQEMKEQDVVSWNTLIA 379
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
GCV S YEEA+ FLR+ML GF+P+LYT
Sbjct: 380 GCVSSSRYEEALRFLREMLLEGFEPSLYT 408
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
+ +G Q+H LI+K FV +++FY K G E + + FDE D ++ +W +++ G
Sbjct: 220 LQLGMQIHGLIVKLSLGMDQFVVTGLINFYAKCGRLELARQAFDEADGPELHAWTAIIGG 279
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPN 259
CV G EAIE +L +G P+
Sbjct: 280 CVQLGSGREAIELFCKLLSSGLKPS 304
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +2
Query: 14 GRQMHSLIIKWG-FNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
G+ +H+ ++K G A F N +L Y+K F+++ ++FD M +++I+SW ++++
Sbjct: 19 GKSLHAQLLKLGSLKADIFTNNHLLTMYLKLNQFDDAQQLFDRMPERNIISWTTLISTYT 78
Query: 191 GSGHYEEAIEFLRDM-LYNGFDPNLYT 268
G YE+A+ R M L +GF PN YT
Sbjct: 79 QLGMYEKALGCFRSMNLEDGFGPNGYT 105
>ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum tuberosum]
Length = 702
Score = 129 bits (325), Expect = 3e-28
Identities = 56/89 (62%), Positives = 75/89 (84%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
E+ VG+Q+HS I+K GF++F+FVCNA+LDFY KS FE+SLK+F EM + D+VSWN+++A
Sbjct: 320 ELRVGKQIHSRIVKQGFDSFSFVCNALLDFYSKSELFEKSLKLFQEMKEHDVVSWNTLIA 379
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
GCV SG YEEA+ FLR+ML GF+P+LYT
Sbjct: 380 GCVSSGRYEEALRFLREMLLEGFEPSLYT 408
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
+ +G Q+H LI+K FV +++FY K G E + + FDE D+ ++ +W +++ G
Sbjct: 220 LQLGMQIHGLIVKSSLGMDQFVVTGLINFYAKCGRLELARQAFDEADEPELHAWTAIIGG 279
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPN 259
CV G EAIE +L +G P+
Sbjct: 280 CVQLGSGREAIELFCKLLSSGLKPS 304
>ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citrus clementina]
gi|567888250|ref|XP_006436647.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
gi|568878438|ref|XP_006492198.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like [Citrus sinensis]
gi|557538842|gb|ESR49886.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
gi|557538843|gb|ESR49887.1| hypothetical protein
CICLE_v10030857mg [Citrus clementina]
Length = 697
Score = 119 bits (299), Expect = 3e-25
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GRQ+HSLIIK GF++FTFV N +LDFY K EESLK FDEMD+ D+VSWN+++AG +
Sbjct: 322 GRQLHSLIIKMGFSSFTFVANTVLDFYSKCELLEESLKTFDEMDEHDVVSWNALIAGHLA 381
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
S HY EAIE L+DML+ G PNLYT
Sbjct: 382 SCHYGEAIELLKDMLFEGHCPNLYT 406
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q H I+K GF++ + +A++D Y K G ++ K+FD + +++VSWN+ML G
Sbjct: 423 GKQTHCCIVKPGFDSNVVIGSALVDMYAKCGRLNDARKVFDHLSSKNLVSWNTMLVGYAQ 482
Query: 194 SGHYEEAIEFLRDMLYNGFDPN 259
G EA+E M N PN
Sbjct: 483 HGLGREALEIYSMMQENKIKPN 504
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GR +H+ +I GF+ N +L Y+K ++ K+FDEM +++++SW+++++G
Sbjct: 19 GRTLHAKMITSGFHPNVITYNHLLLMYVKFSRINDAQKLFDEMPERNVISWSALISGFSQ 78
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
G E A+ + R M+ +PN YT
Sbjct: 79 IGMPEVALNYFRLMVCCVLEPNYYT 103
>gb|EOY19053.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 671
Score = 113 bits (283), Expect = 2e-23
Identities = 50/88 (56%), Positives = 69/88 (78%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I VG+Q HSLI K G+ +F +V NA+LDFY K G +E+L+ F++MD D+VSWNS+++G
Sbjct: 320 IEVGKQFHSLIAKMGYVSFIYVGNAVLDFYSKCGLLQEALRTFEDMDGHDMVSWNSLISG 379
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
VGSG YE+AIE L++ML+ G+ PNLYT
Sbjct: 380 HVGSGQYEDAIELLKEMLFQGYKPNLYT 407
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q H IIK F++ V +A++D Y K G + K+FD + +++VSWN+ML G
Sbjct: 424 GKQTHCCIIKPAFDSNVVVGSALIDMYAKCGVLNAARKVFDYLTSKNLVSWNTMLVGYAQ 483
Query: 194 SGHYEEAIEFLRDMLYNGFDPN 259
G EA+E M + PN
Sbjct: 484 HGFAREALEIYCMMQRDDVKPN 505
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
++ VG Q+H L++K G FV ++ FY K G + ++F E++Q ++ +W S++
Sbjct: 218 DLKVGMQIHGLVVKCGLEFDKFVETGLISFYTKCGELILAGQVFLEVNQSNVAAWTSLIG 277
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPN 259
G V G EEAI+ + +G P+
Sbjct: 278 GYVQQGRREEAIDLFLKLHSSGIRPS 303
>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|215768699|dbj|BAH00928.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
Japonica Group]
Length = 877
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/88 (42%), Positives = 60/88 (68%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H+++++ G++ F NA++D YMK G + + IF++M D+VSWN++++G
Sbjct: 218 IEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG 277
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
CV +GH AIE L M Y+G PN++T
Sbjct: 278 CVLNGHDHRAIELLLQMKYSGLVPNVFT 305
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH + A+E M+ G +PN T
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHIT 608
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 17 RQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGS 196
RQ+H+L +K GF V N ++D Y K C ++ ++F+E DI++ SM+
Sbjct: 424 RQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQC 483
Query: 197 GHYEEAIEFLRDMLYNGFDPN 259
H E AI+ +ML G +P+
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPD 504
>gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/88 (42%), Positives = 60/88 (68%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H+++++ G++ F NA++D YMK G + + IF++M D+VSWN++++G
Sbjct: 218 IEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG 277
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
CV +GH AIE L M Y+G PN++T
Sbjct: 278 CVLNGHDHRAIELLLQMKYSGLVPNVFT 305
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH + A+E M+ G +PN T
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHIT 608
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 17 RQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGS 196
RQ+H+L +K GF V N ++D Y K C ++ ++F+E DI++ SM+
Sbjct: 424 RQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQC 483
Query: 197 GHYEEAIEFLRDMLYNGFDPN 259
H E AI+ +ML G +P+
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPD 504
>ref|XP_004306267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 814
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GR +HSLI GFN V A++DFY K G E+++K+FDEM ++D+V WN+++ GCVG
Sbjct: 29 GRSIHSLIRNSGFNTDVRVGTALVDFYCKCGLIEDAVKVFDEMRERDLVVWNALIHGCVG 88
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
G +EE +E R+M G PN T
Sbjct: 89 CGCFEEGVELFREMQGEGLKPNSRT 113
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
+ + Q+H + +K G+ + FV NA+L+ Y + GCFE S +F+ + +D+ WNSMLA
Sbjct: 231 VELAGQIHQMAVKCGYISDIFVVNALLNMYSECGCFELSRALFETVSNRDVAMWNSMLAA 290
Query: 185 CVGSGHYEEAIEFLRDMLYNG 247
G Y+EA+ M G
Sbjct: 291 YSEYGLYDEAVSLFSRMRREG 311
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTF---VCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSM 175
+P+G+ +H+ + F+ F F + NA + Y +SG + + +IF + ++I+SWN++
Sbjct: 534 LPLGQCLHAYATRRHFS-FDFDLSLANAFISMYARSGSMQYAKRIFKSLPTRNIISWNAL 592
Query: 176 LAGCVGSGHYEEAIEFLRDMLYNGFDPN 259
+ G GH +AI + ML +GF PN
Sbjct: 593 ITGYSMHGHGYDAILMFQQMLEDGFQPN 620
>ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Populus trichocarpa]
gi|550340337|gb|EEE85631.2| hypothetical protein
POPTR_0004s04740g [Populus trichocarpa]
Length = 858
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/85 (42%), Positives = 59/85 (69%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GR++H +IK G+++ F NA++D Y K G E++ +FDE+ + DIVSWN+++AGCV
Sbjct: 202 GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL 261
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
++ A+E LR+M +G PN++T
Sbjct: 262 HEYHHRALELLREMNKSGMCPNMFT 286
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/89 (30%), Positives = 55/89 (61%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
++ +G+Q+H +++ GF++ FV N+++ Y K G F ++ +FD + + +VSWN++ +
Sbjct: 97 DLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFS 156
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
V S + EA+ DM+ +G PN ++
Sbjct: 157 CYVHSDMHGEAVSLFHDMVLSGIRPNEFS 185
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H I+K+GF + F N++++ Y K G E++ F + + IVSW++M+ G
Sbjct: 505 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 564
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
G+ +EA++ + ML G PN T
Sbjct: 565 HGYGKEALQLFKQMLKVGVPPNHIT 589
>gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
Length = 641
Score = 83.2 bits (204), Expect = 3e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H ++++ G++ F NA++D Y+K G + + IF++M D+VSWN++++G
Sbjct: 218 IEAGRQVHGMVVRMGYDKDVFTANALVDMYVKMGRVDIASLIFEKMPDSDVVSWNALISG 277
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
CV +GH AIE L M +G PN++T
Sbjct: 278 CVLNGHDHRAIELLLQMKSSGLVPNVFT 305
>ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat
protein -like [Oryza sativa Japonica Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa
Japonica Group]
Length = 658
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G +H ++K+GF A VCNA++ FY KS E++L +FDEM Q+DI+SWNS++ GC
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 194 SGHYEEAIEFLRDMLYNG 247
+G Y++A+E M G
Sbjct: 63 NGLYDKAVELFVRMWLEG 80
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/82 (31%), Positives = 46/82 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GR+MH+ ++ G+ FV NA++D Y+K G + ++FD + ++++SW M+AG
Sbjct: 305 GREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGM 364
Query: 194 SGHYEEAIEFLRDMLYNGFDPN 259
G +AI M +G P+
Sbjct: 365 HGRGRDAIALFEQMKGSGIQPD 386
>gb|EAY72952.1| hypothetical protein OsI_00823 [Oryza sativa Indica Group]
Length = 658
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G +H ++K+GF A VCNA++ FY KS E++L +FDEM Q+DI+SWNS++ GC
Sbjct: 427 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 486
Query: 194 SGHYEEAIEFLRDMLYNG 247
+G Y++A+E M G
Sbjct: 487 NGLYDKAVELFVRMWLEG 504
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G +H + K G V NA++ Y + G + SL++FD M +D++SWNS+++GC
Sbjct: 215 GEVVHGYLEKLGLGVQCAVGNALIALYSRCGHVDGSLQVFDGMPHRDVISWNSVISGCFS 274
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
+G + ++IE M G + N T
Sbjct: 275 NGWHGKSIELFAKMWSEGLEINPVT 299
>ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Oryza brachyantha]
Length = 877
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H ++++ G++ F NA++D Y+K G + + IF++M D+VSWN++++G
Sbjct: 218 IEAGRQVHGMVVRTGYDKDVFTANALVDMYVKVGRVDIASVIFEKMPDSDVVSWNALISG 277
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
CV +GH AIE L M +G PN++T
Sbjct: 278 CVLNGHDHRAIELLLQMKSSGLVPNVFT 305
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 524 GKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH ++A+E M+ G DPN T
Sbjct: 584 HGHGKKALELFHRMVDEGIDPNHIT 608
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/86 (27%), Positives = 48/86 (55%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
+GRQ+H +IK ++ ++ ++D Y K +++ K+FD M +D+V WN++++GC
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKHQFLDDARKVFDWMSHRDLVLWNALISGCS 380
Query: 191 GSGHYEEAIEFLRDMLYNGFDPNLYT 268
+ EA+ +++ G N T
Sbjct: 381 HGERHGEALSLFCELIKEGIGVNRTT 406
>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
++ +GRQ+H +++K GF +V NA++D Y K G +E+ K+ + M Q+D VSWNS++
Sbjct: 149 DLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIIT 208
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
CV +G EA++ L +ML + +PN+ T
Sbjct: 209 ACVANGVVYEALDLLENMLLSELEPNVVT 237
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/85 (29%), Positives = 48/85 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+++HS+ I G + +FV A+++ Y K + FDE+ ++D +WN++++G
Sbjct: 425 GKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYAR 484
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
+ E + M +GF+PN+YT
Sbjct: 485 CNQIGKIRELVERMKSDGFEPNVYT 509
>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Fragaria vesca subsp. vesca]
Length = 861
Score = 81.3 bits (199), Expect = 1e-13
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GR++H ++K G+++ F NA++D Y K+ C E+++ +F+E+ Q D+VSWN+++AGCV
Sbjct: 205 GRKLHGYVVKLGYDSDLFSANALVDMYAKAICLEDAVSVFEEIAQPDVVSWNAVIAGCVL 264
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
+ A++F R + +G PN++T
Sbjct: 265 HNCHGRALKFFRQLGGSGIRPNMFT 289
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H I+K+GF + F N++++ Y K G E++ + F E+ Q+ IVSW++M+ G
Sbjct: 508 GKQIHVHILKFGFLSDAFAGNSLVNMYAKCGSIEDAGRAFSEVPQRGIVSWSAMIGGLAQ 567
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH +EAI ML +G PN T
Sbjct: 568 HGHGKEAINMFNHMLGDGISPNHIT 592
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +2
Query: 2 EIPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLA 181
++ +G Q+H ++ GF + FV NA++ Y K G F ++ K+FD M ++++VSWN++ +
Sbjct: 100 DLRLGMQVHGVVYVTGFESDEFVANALVVMYSKCGEFGDTRKLFDVMQERNVVSWNALFS 159
Query: 182 GCVGSGHYEEAIEFLRDMLYNGFDPNLYT 268
V S EA++ +M+ +G P+ Y+
Sbjct: 160 CYVQSDFLLEAMDLFEEMVLSGVRPDEYS 188
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
V Q+H+L IK GF + +V N++LD Y K G E + +IF+E +D+V++ SM+
Sbjct: 406 VCEQVHALSIKTGFLSDRYVINSLLDAYGKCGQVENAGRIFEECKTEDLVAFTSMITAYA 465
Query: 191 GSGHYEEAIEFLRDMLYNGFDPNLY 265
EEA++ ML+ G +P+ +
Sbjct: 466 QYEQGEEALKLYVQMLHRGNEPDSF 490
>ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|47848643|dbj|BAD22491.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113630915|dbj|BAF24596.1|
Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 877
Score = 81.3 bits (199), Expect = 1e-13
Identities = 34/87 (39%), Positives = 57/87 (65%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H+++++ G+ F NA++D Y+K G + + IF++M D+VSWN++++G
Sbjct: 218 IDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG 277
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLY 265
CV +GH AIE L M +G PN++
Sbjct: 278 CVLNGHDHRAIELLLQMKSSGLVPNVF 304
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/86 (27%), Positives = 49/86 (56%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
+GRQ+H +IK ++ ++ ++D Y K+ ++++K+FD M +D++ WN++++GC
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 380
Query: 191 GSGHYEEAIEFLRDMLYNGFDPNLYT 268
G ++EA + G N T
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTT 406
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH + A+E M+ G +PN T
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHIT 608
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 17 RQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGS 196
RQ+H+L K GF V N ++D Y K C +++++F+E DI++ SM+
Sbjct: 424 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 483
Query: 197 GHYEEAIEFLRDMLYNGFDPN 259
H E AI+ +ML G +P+
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPD 504
>gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 81.3 bits (199), Expect = 1e-13
Identities = 34/87 (39%), Positives = 57/87 (65%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H+++++ G+ F NA++D Y+K G + + IF++M D+VSWN++++G
Sbjct: 125 IDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG 184
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLY 265
CV +GH AIE L M +G PN++
Sbjct: 185 CVLNGHDHRAIELLLQMKSSGLVPNVF 211
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/86 (27%), Positives = 49/86 (56%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
+GRQ+H +IK ++ ++ ++D Y K+ ++++K+FD M +D++ WN++++GC
Sbjct: 228 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 287
Query: 191 GSGHYEEAIEFLRDMLYNGFDPNLYT 268
G ++EA + G N T
Sbjct: 288 HGGRHDEAFSIFYGLRKEGLGVNRTT 313
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 431 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 490
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH + A+E M+ G +PN T
Sbjct: 491 HGHGKRALELFGRMVDEGINPNHIT 515
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 17 RQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGS 196
RQ+H+L K GF V N ++D Y K C +++++F+E DI++ SM+
Sbjct: 331 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 390
Query: 197 GHYEEAIEFLRDMLYNGFDPN 259
H E AI+ +ML G +P+
Sbjct: 391 DHGEGAIKLFMEMLRKGLEPD 411
>gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indica Group]
Length = 503
Score = 81.3 bits (199), Expect = 1e-13
Identities = 34/87 (39%), Positives = 57/87 (65%)
Frame = +2
Query: 5 IPVGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAG 184
I GRQ+H+++++ G+ F NA++D Y+K G + + IF++M D+VSWN++++G
Sbjct: 94 IDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG 153
Query: 185 CVGSGHYEEAIEFLRDMLYNGFDPNLY 265
CV +GH AIE L M +G PN++
Sbjct: 154 CVLNGHDHRAIELLLQMKSSGLVPNVF 180
>ref|XP_002320797.2| hypothetical protein POPTR_0014s02950g [Populus trichocarpa]
gi|550323256|gb|EEE99112.2| hypothetical protein
POPTR_0014s02950g [Populus trichocarpa]
Length = 1224
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +2
Query: 20 QMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGSG 199
Q+H+ ++K GF+ F ++ A+LDFYMK GC + +FD M +DIVSWN+++ GC +G
Sbjct: 74 QIHTHLLKSGFDQFVYISTALLDFYMKLGCVHSARNLFDHMLDRDIVSWNALICGCSRNG 133
Query: 200 HYEEAIEFLRDMLYNGFDP 256
+ +A+E ML GF P
Sbjct: 134 YDVDALEIFVQMLREGFSP 152
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
+G +H +K G + V N ++ Y K E ++ +F EM ++ ++SWNS+++GCV
Sbjct: 271 IGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCV 330
Query: 191 GSGHYEEAIEFLRDMLYNGFDPNLYT 268
+G +A++F M G P+ T
Sbjct: 331 QAGRASDAMKFFCQMKMFGLSPDTIT 356
>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
thaliana] gi|7270464|emb|CAB80230.1| putative protein
[Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 804
Score = 80.5 bits (197), Expect = 2e-13
Identities = 33/85 (38%), Positives = 60/85 (70%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+++H+++IK GF + +VCN+++ YMK GC ++ K+F+EM ++DIVSWNSM++G +
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
G ++ ++ML GF P+ ++
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFS 233
>ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Setaria italica]
Length = 883
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/85 (38%), Positives = 55/85 (64%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
GRQ+H+++++ G++ F NA++D Y K G + + +F++M D+VSWN+ ++GCV
Sbjct: 225 GRQVHAMVVRMGYDEDVFTANALVDMYSKLGDIDTAAVVFEKMPAVDVVSWNAFISGCVI 284
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
GH A+E L M +G PN+YT
Sbjct: 285 HGHDHRALELLIQMKSSGLVPNVYT 309
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/81 (32%), Positives = 47/81 (58%)
Frame = +2
Query: 11 VGRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCV 190
+GRQ+H +IK + F+ ++D Y K G +++ K+F+ M Q++++ WN++++GC
Sbjct: 325 LGRQIHGFMIKADAVSDEFIGVGLVDMYAKDGFLDDARKVFNFMPQKNLILWNALISGCS 384
Query: 191 GSGHYEEAIEFLRDMLYNGFD 253
G EA+ R M G D
Sbjct: 385 HDGQCGEALSLFRRMRMEGLD 405
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +2
Query: 17 RQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVGS 196
RQ+H+L K G + + V N ++D Y K C +++++F+E DI+S SM+ S
Sbjct: 430 RQVHALAEKIGLLSDSHVINGLIDSYWKCDCLNDAVRVFEESCPDDIISSTSMITALSQS 489
Query: 197 GHYEEAIEFLRDMLYNGFDPNLY 265
H E+AI+ ML G +P+ +
Sbjct: 490 DHGEDAIKLFVQMLRKGLEPDSF 512
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +2
Query: 14 GRQMHSLIIKWGFNAFTFVCNAILDFYMKSGCFEESLKIFDEMDQQDIVSWNSMLAGCVG 193
G+Q+H+ +IK F + F NA++ Y K G E++ F + ++ +VSW++M+ G
Sbjct: 530 GKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPERGVVSWSAMIGGLAQ 589
Query: 194 SGHYEEAIEFLRDMLYNGFDPNLYT 268
G + ++E ML G PN T
Sbjct: 590 HGQGKRSLELFHRMLDEGVAPNHIT 614