BLASTX nr result

ID: Rauwolfia21_contig00055563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00055563
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345456.1| PREDICTED: telomerase reverse transcriptase-...    64   3e-08
ref|XP_004229622.1| PREDICTED: telomerase reverse transcriptase-...    62   8e-08
ref|XP_006345457.1| PREDICTED: telomerase reverse transcriptase-...    61   2e-07
gb|AFJ00032.1| telomerase reverse transcriptase, partial [Nicoti...    57   3e-06
gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicoti...    57   3e-06
gb|AEB33869.1| telomerase reverse transcriptase, partial [Nicoti...    55   7e-06

>ref|XP_006345456.1| PREDICTED: telomerase reverse transcriptase-like isoform X1
           [Solanum tuberosum]
          Length = 988

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/58 (53%), Positives = 40/58 (68%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHCVIPSLGQDTYVGSGVVTEGGKFGKNLDGNE 106
           YH+IIK LKSLIRKA  CQHLRLL++HC  PSL QDT   +  + +G K   ++  N+
Sbjct: 185 YHSIIKLLKSLIRKAHQCQHLRLLEEHCSAPSLDQDTKNIAATILKGNKSEASIFPND 242


>ref|XP_004229622.1| PREDICTED: telomerase reverse transcriptase-like [Solanum
           lycopersicum]
          Length = 1215

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHCVIPSLGQDTYVGSGVVTEGGKFGKNLDGNEYA 100
           YH+IIK LKSLIRKA  CQHLRLL+KHC  PS+ QD    +  + +  K   ++  N+  
Sbjct: 412 YHSIIKLLKSLIRKAHHCQHLRLLEKHCSAPSVDQDAKNIAATILKANKSEASVPANDCP 471

Query: 99  GVPVA-CDLPLEKCH-SSDSRS 40
              +A  D   + C+ +S+S+S
Sbjct: 472 ENGIAHSDFKSDSCNTTSESQS 493


>ref|XP_006345457.1| PREDICTED: telomerase reverse transcriptase-like isoform X2
           [Solanum tuberosum]
          Length = 819

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHCVIPSLGQDT 169
           YH+IIK LKSLIRKA  CQHLRLL++HC  PSL QDT
Sbjct: 403 YHSIIKLLKSLIRKAHQCQHLRLLEEHCSAPSLDQDT 439


>gb|AFJ00032.1| telomerase reverse transcriptase, partial [Nicotiana
           tomentosiformis]
          Length = 511

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHCVIPSLGQDT 169
           YH+IIK LK+LIRKA  CQH+RLL+KHC  PSL Q T
Sbjct: 239 YHSIIKLLKTLIRKAHHCQHVRLLEKHCSTPSLDQCT 275


>gb|AEA72244.1| telomerase reverse transcriptase, partial [Nicotiana
           tomentosiformis]
          Length = 668

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHCVIPSLGQDT 169
           YH+IIK LK+LIRKA  CQH+RLL+KHC  PSL Q T
Sbjct: 241 YHSIIKLLKTLIRKAHHCQHVRLLEKHCSTPSLDQCT 277


>gb|AEB33869.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 537

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
 Frame = -3

Query: 279 YHAIIKQLKSLIRKARGCQHLRLLDKHC-VIPSLGQDT 169
           YH+IIK LK+LIRKA  CQH+RLL+KHC   PSL QDT
Sbjct: 264 YHSIIKLLKTLIRKAHHCQHVRLLEKHCSSTPSLDQDT 301


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