BLASTX nr result
ID: Rauwolfia21_contig00055504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00055504
(261 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 167 1e-39
ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613... 167 2e-39
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 165 7e-39
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 164 1e-38
emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group] 162 3e-38
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 162 3e-38
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759... 162 4e-38
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 162 6e-38
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 161 7e-38
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 161 7e-38
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 161 7e-38
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 161 1e-37
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 161 1e-37
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 161 1e-37
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi... 161 1e-37
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 161 1e-37
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 159 3e-37
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 159 3e-37
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 159 5e-37
gb|AAK14317.1|AF325187_1 putative POL3-like reverse transcriptas... 159 5e-37
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 167 bits (424), Expect = 1e-39
Identities = 75/86 (87%), Positives = 85/86 (98%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
++QV++LME+G++RESMSPCAVPVLLVPKKDG+WRMCVDCRAINNITVKYRHPIPRLDDM
Sbjct: 927 EKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDM 986
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS +FSK+DLKSGYHQIRMKE
Sbjct: 987 LDELHGSSIFSKVDLKSGYHQIRMKE 1012
>ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613249 [Citrus sinensis]
Length = 559
Score = 167 bits (422), Expect = 2e-39
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L+ KGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAIN ITVKYRHPIPRLDDM
Sbjct: 367 QRQVEELLAKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDM 426
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS VFSKIDLKSGYHQIR++E
Sbjct: 427 LDELHGSCVFSKIDLKSGYHQIRIRE 452
>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 165 bits (417), Expect = 7e-39
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L+ KG+VRESMSPCAV VLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM
Sbjct: 621 QRQVEELLTKGHVRESMSPCAVLVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 680
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS VF+KIDLKSGYHQIRMKE
Sbjct: 681 LDELHGSCVFTKIDLKSGYHQIRMKE 706
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 164 bits (415), Expect = 1e-38
Identities = 76/86 (88%), Positives = 81/86 (94%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L+ KGY RESMSPCAVPVLLVPKKDGTWRMCVDCRAIN ITVKYRHP+PRLDDM
Sbjct: 654 QRQVEELLAKGYARESMSPCAVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPMPRLDDM 713
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS VFSKIDLKSGYHQIR++E
Sbjct: 714 LDELHGSCVFSKIDLKSGYHQIRIRE 739
Score = 115 bits (287), Expect = 8e-24
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -3
Query: 175 KKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSYVFSKIDLKSGYHQIRMKE 2
++DGTWRMCVDCRAIN ITVKYRHP+PRLDDMLDELHGS VFSKIDLKSGYHQIR++E
Sbjct: 463 RQDGTWRMCVDCRAINKITVKYRHPMPRLDDMLDELHGSCVFSKIDLKSGYHQIRIRE 520
>emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group]
Length = 1021
Score = 162 bits (411), Expect = 3e-38
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 541 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 600
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQIRMK
Sbjct: 601 LDELSGSLVFSKIDLRSGYHQIRMK 625
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 162 bits (411), Expect = 3e-38
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 541 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 600
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQIRMK
Sbjct: 601 LDELSGSLVFSKIDLRSGYHQIRMK 625
>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
Length = 696
Score = 162 bits (410), Expect = 4e-38
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 370 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 429
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQ+RMK
Sbjct: 430 LDELSGSIVFSKIDLRSGYHQVRMK 454
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 162 bits (409), Expect = 6e-38
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPV+LVPKKDGTWRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 738 QRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDM 797
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL G+ VFSK+DL+SGYHQIRMK
Sbjct: 798 LDELSGAIVFSKVDLRSGYHQIRMK 822
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 161 bits (408), Expect = 7e-38
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPC+VPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 822
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQIRMK
Sbjct: 823 LDELSGSLVFSKIDLRSGYHQIRMK 847
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 161 bits (408), Expect = 7e-38
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L+ KG+VRESM PCA+ VLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM
Sbjct: 215 QRQVEELLTKGHVRESMRPCAILVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 274
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS VF KIDLKSGYHQIRMKE
Sbjct: 275 LDELHGSCVFIKIDLKSGYHQIRMKE 300
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 161 bits (408), Expect = 7e-38
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPC+VPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 822
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQIRMK
Sbjct: 823 LDELSGSLVFSKIDLRSGYHQIRMK 847
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 161 bits (407), Expect = 1e-37
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 1068 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 1127
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSK+DL+SGYHQIRMK
Sbjct: 1128 LDELSGSIVFSKVDLRSGYHQIRMK 1152
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 161 bits (407), Expect = 1e-37
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 735 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 794
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSK+DL+SGYHQIRMK
Sbjct: 795 LDELSGSIVFSKVDLRSGYHQIRMK 819
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 161 bits (407), Expect = 1e-37
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPC++PVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 822
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL+SGYHQIRMK
Sbjct: 823 LDELSGSLVFSKIDLRSGYHQIRMK 847
>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
Japonica Group]
Length = 1134
Score = 161 bits (407), Expect = 1e-37
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 918 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 977
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSK+DL+SGYHQIRMK
Sbjct: 978 LDELSGSIVFSKVDLRSGYHQIRMK 1002
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 161 bits (407), Expect = 1e-37
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 1077 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 1136
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSK+DL+SGYHQIRMK
Sbjct: 1137 LDELSGSIVFSKVDLRSGYHQIRMK 1161
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 159 bits (403), Expect = 3e-37
Identities = 72/85 (84%), Positives = 81/85 (95%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPC+VPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 76 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 135
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VF KIDL+SGYHQIRMK
Sbjct: 136 LDELSGSLVFCKIDLRSGYHQIRMK 160
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 159 bits (403), Expect = 3e-37
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV +L++KGYVRES+SPC+VPVLLVPKKDG+WRMCVDCRAINNIT++YRHPIPRLDDM
Sbjct: 659 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDM 718
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS VFSKIDL SGYHQIRMK
Sbjct: 719 LDELSGSLVFSKIDLCSGYHQIRMK 743
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 159 bits (401), Expect = 5e-37
Identities = 72/85 (84%), Positives = 81/85 (95%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
QRQV L++KGYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAINNITV+YRHPIPRLDDM
Sbjct: 738 QRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDM 797
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMK 5
LDEL GS +FSKIDL+SG+HQIRMK
Sbjct: 798 LDELSGSMIFSKIDLRSGFHQIRMK 822
>gb|AAK14317.1|AF325187_1 putative POL3-like reverse transcriptase [Phaseolus coccineus]
Length = 343
Score = 159 bits (401), Expect = 5e-37
Identities = 72/86 (83%), Positives = 81/86 (94%)
Frame = -3
Query: 259 QRQVSDLMEKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDM 80
+ QV DL+EKG+V++S+SPCAVPVLLVPKKDG WRMC DCRAINNIT+KYRHPIPRLDDM
Sbjct: 61 ESQVQDLLEKGWVQKSLSPCAVPVLLVPKKDGKWRMCCDCRAINNITIKYRHPIPRLDDM 120
Query: 79 LDELHGSYVFSKIDLKSGYHQIRMKE 2
LDELHGS +FSKIDLKSGYHQIR+KE
Sbjct: 121 LDELHGSTLFSKIDLKSGYHQIRIKE 146