BLASTX nr result

ID: Rauwolfia21_contig00055440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00055440
         (214 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [V...    59   7e-07
ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein C...    57   2e-06
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C...    57   3e-06
gb|ESW05901.1| hypothetical protein PHAVU_010G002100g [Phaseolus...    57   3e-06
ref|XP_004246325.1| PREDICTED: chlorophyll a-b binding protein C...    55   1e-05

>gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
          Length = 290

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/68 (50%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  ASTSAFFGTRLLEHNPLMGVDAAAVGVGRIQTRFNFGXXXXXXXXXXXXXTS-DRPLWFP 190
           A+TS+F GTRLL+         A  G GRIQ RF FG              S DRPLW+P
Sbjct: 9   AATSSFMGTRLLD---------AHSGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYP 59

Query: 191 GAKAPEWL 214
           GAKAPEWL
Sbjct: 60  GAKAPEWL 67


>ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
           chloroplastic-like [Cucumis sativus]
           gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll
           a-b binding protein CP29.2, chloroplastic-like [Cucumis
           sativus]
          Length = 284

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/68 (48%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  ASTSAFFGTRLLEHNPLMGVDAAAVGVGRIQTRFNFGXXXXXXXXXXXXXT-SDRPLWFP 190
           A+TS+F GTRL E  P           GR+Q RF FG               SDRPLWFP
Sbjct: 5   AATSSFLGTRLAEIVP---------SSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFP 55

Query: 191 GAKAPEWL 214
           GAKAPEWL
Sbjct: 56  GAKAPEWL 63


>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
           chloroplastic-like [Glycine max]
          Length = 290

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = +2

Query: 14  ASTSAFFGTRLLEHNPLMGVDAAAVGVGRIQTRFNFGXXXXXXXXXXXXXT---SDRPLW 184
           A+TS+F GTRLLE         A  G GR+Q RF FG             +   SDRPLW
Sbjct: 7   AATSSFMGTRLLE---------AHSGAGRVQARFGFGKKKAAAPKKVSRGSGSSSDRPLW 57

Query: 185 FPGAKAPEWL 214
           +PGAKAPE+L
Sbjct: 58  YPGAKAPEYL 67


>gb|ESW05901.1| hypothetical protein PHAVU_010G002100g [Phaseolus vulgaris]
          Length = 289

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  ASTSAFFGTRLLEHNPLMGVDAAAVGVGRIQTRFNFGXXXXXXXXXXXXXT-SDRPLWFP 190
           A+TS+F GTRLLE         A  G GR+Q RF FG             + ++RPLW+P
Sbjct: 9   AATSSFMGTRLLE---------AHSGSGRVQARFGFGPKKKAAPKKVSKGSGTERPLWYP 59

Query: 191 GAKAPEWL 214
           GAK+PEWL
Sbjct: 60  GAKSPEWL 67


>ref|XP_004246325.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 285

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 36/67 (53%)
 Frame = +2

Query: 14  ASTSAFFGTRLLEHNPLMGVDAAAVGVGRIQTRFNFGXXXXXXXXXXXXXTSDRPLWFPG 193
           A+TS+F GTRL E +          G GR+Q RF FG               DRPLW+PG
Sbjct: 5   AATSSFIGTRLPEIHS---------GSGRVQARFGFGQKKAAPKKAAKKQIPDRPLWYPG 55

Query: 194 AKAPEWL 214
           AKAPE+L
Sbjct: 56  AKAPEYL 62


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