BLASTX nr result
ID: Rauwolfia21_contig00055348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00055348
(315 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe... 133 3e-29
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise... 132 6e-29
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi... 131 8e-29
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 130 2e-28
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 130 2e-28
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis] 130 2e-28
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p... 130 2e-28
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 126 3e-27
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 125 8e-27
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]... 121 1e-25
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps... 120 2e-25
gb|AFN53666.1| hypothetical protein [Linum usitatissimum] 118 7e-25
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 133 bits (335), Expect = 2e-29
Identities = 65/105 (61%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI+AS+LS FSS+ YA KVFD+I +PNL+SWN LIR+Y+S ++P +S+L FV M+ E
Sbjct: 70 ASKLIEASSLSHFSSLDYAHKVFDEIPQPNLFSWNALIRAYSSSQDPIQSILMFVNMICE 129
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKS-EFGSDLFV 314
E P+KFTYPFV KASA++ ALR G GLHGMV+K + G D+FV
Sbjct: 130 GREFPSKFTYPFVFKASAKMKALRFGRGLHGMVVKGRDVGLDIFV 174
>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 744
Score = 133 bits (335), Expect = 2e-29
Identities = 65/105 (61%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI+AS+LS FSS+ YA KVFD+I +PNL+SWN LIR+Y+S ++P +S+L FV ML E
Sbjct: 70 ASKLIEASSLSHFSSLDYAHKVFDEIPQPNLFSWNALIRAYSSSQDPIQSILMFVNMLCE 129
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKS-EFGSDLFV 314
E P+KFTYPFV KASA++ A+R G GLHGMV+K + G D+FV
Sbjct: 130 GREFPSKFTYPFVFKASAKMKAIRFGRGLHGMVVKGRDVGLDIFV 174
>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 133 bits (334), Expect = 3e-29
Identities = 61/104 (58%), Positives = 83/104 (79%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI ASALS FSS+ YA++VFDQI +PN+Y+WN LIR+YAS +P++S+L F+ ML
Sbjct: 65 ASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILVFLDMLDH 124
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
E P+K+TYPF IKA++EL AL+VG G HGM +K+ GSD+++
Sbjct: 125 CSECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASLGSDIYI 168
>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
Length = 726
Score = 132 bits (331), Expect = 6e-29
Identities = 62/104 (59%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI SALS+FSS+ YAQKVFDQ+ RPNL+SWN+L+R+YAS P SL F+++L+
Sbjct: 45 ASKLISLSALSDFSSLAYAQKVFDQMPRPNLFSWNILVRAYASASRPLHSLSLFIRLLHH 104
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+ P+KFTYPF IKA A+LS LR+G G+HGM +K SD+FV
Sbjct: 105 SPDPPDKFTYPFAIKACADLSDLRLGRGIHGMAVKGNHASDVFV 148
>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1049
Score = 131 bits (330), Expect = 8e-29
Identities = 60/104 (57%), Positives = 85/104 (81%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI A+ALS FSS+ YA++VFD+I PNL++WN LIR+YAS +P +S+ F+QML E
Sbjct: 121 ASKLITAAALSPFSSLDYARQVFDEIPEPNLFTWNALIRAYASSPDPVESIRIFLQMLDE 180
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+E PNKFT+PF++KA++EL A ++G G HGMV+K+E GSD+++
Sbjct: 181 CNECPNKFTFPFLLKAASELRASKIGRGFHGMVVKAELGSDVYI 224
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 130 bits (327), Expect = 2e-28
Identities = 59/104 (56%), Positives = 82/104 (78%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL +ALS FSS+ YA+KVF++IS+PNLY+WN LIR++AS EP SLL F++MLY+
Sbjct: 66 ASKLFSVAALSSFSSLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYD 125
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+ PNKFT+PFVIKA+A +++L + +HGM +K+ GSDLF+
Sbjct: 126 SPDFPNKFTFPFVIKAAAGVASLPFSQAIHGMAIKASLGSDLFI 169
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 130 bits (327), Expect = 2e-28
Identities = 61/104 (58%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
A+KL A ALS SS+ YA KVFDQI RPNLY+WN LIR++AS +P + LL F+QML+E
Sbjct: 65 ATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHE 124
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PN +T+PFVIKA+ E+S+L G+ +HGMV+K+ FGSDLF+
Sbjct: 125 SQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFI 168
>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
Length = 739
Score = 130 bits (326), Expect = 2e-28
Identities = 60/104 (57%), Positives = 81/104 (77%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKLI A+S FSS+ YA +VFDQI +PNLY+WN +IR+YAS +P +S++ F++ML +
Sbjct: 66 ASKLITVCAMSSFSSLDYAHQVFDQIPKPNLYTWNTIIRAYASSSDPIQSIVVFLRMLDQ 125
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
E PNK+TYPFV+KA++EL A RVG G HGMV+KS SD+F+
Sbjct: 126 CCESPNKYTYPFVLKAASELKASRVGRGFHGMVMKSSLASDVFI 169
>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 733
Score = 130 bits (326), Expect = 2e-28
Identities = 62/104 (59%), Positives = 82/104 (78%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL ASALS FSS+ YA+KVFDQI +PNLY+WN LIR YAS EP + +L F++M+ E
Sbjct: 60 ASKLFAASALSPFSSLDYARKVFDQIPKPNLYTWNTLIRVYASGPEPLQGILIFLRMVDE 119
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PNKFT+PFVIKA+AE+ ++ VG+ LHGMV+K+ G+D+F+
Sbjct: 120 SPYYPNKFTFPFVIKAAAEIVSVCVGQALHGMVIKASLGADVFI 163
>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 128 bits (321), Expect = 9e-28
Identities = 59/104 (56%), Positives = 81/104 (77%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL ASALS FS++ YA+ +FDQI +PNLY+WN LIR+YAS +P +S + F+ +L +
Sbjct: 60 ASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDK 119
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
++LPNKFT+PFVIKA++EL A RVG +HGM +K FG DL++
Sbjct: 120 CEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYI 163
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 126 bits (316), Expect = 3e-27
Identities = 59/104 (56%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
AS+LI A+ALS F S+ YAQ+VFDQI PNLY+WN LIR+YAS P +SLL F++ML++
Sbjct: 70 ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+ P+KFT+PF+IKA++EL L G+ HGMV+K GSD+F+
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFI 173
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 126 bits (316), Expect = 3e-27
Identities = 59/104 (56%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
AS+LI A+ALS F S+ YAQ+VFDQI PNLY+WN LIR+YAS P +SLL F++ML++
Sbjct: 70 ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+ P+KFT+PF+IKA++EL L G+ HGMV+K GSD+F+
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFI 173
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 126 bits (316), Expect = 3e-27
Identities = 59/104 (56%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
AS+LI A+ALS F S+ YAQ+VFDQI PNLY+WN LIR+YAS P +SLL F++ML++
Sbjct: 70 ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
+ P+KFT+PF+IKA++EL L G+ HGMV+K GSD+F+
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFI 173
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 125 bits (313), Expect = 8e-27
Identities = 57/104 (54%), Positives = 78/104 (75%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL AL FSS++YA+++FDQI +PNLY+WN LIR+Y+S EP +S + F+Q++Y
Sbjct: 74 ASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYN 133
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PN+FT+PFVIKA+A L RVG+ +HGMV+KS F DLF+
Sbjct: 134 SPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFI 177
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 125 bits (313), Expect = 8e-27
Identities = 57/104 (54%), Positives = 78/104 (75%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL AL FSS++YA+++FDQI +PNLY+WN LIR+Y+S EP +S + F+Q++Y
Sbjct: 65 ASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYN 124
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PN+FT+PFVIKA+A L RVG+ +HGMV+KS F DLF+
Sbjct: 125 SPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFI 168
>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein
[Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
editing factor OTP81 [Arabidopsis thaliana]
Length = 738
Score = 121 bits (303), Expect = 1e-25
Identities = 56/104 (53%), Positives = 81/104 (77%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL +ALS F+S++YA+KVFD+I +PN ++WN LIR+YAS +P S+ +F+ M+ E
Sbjct: 65 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PNK+T+PF+IKA+AE+S+L +G+ LHGM +KS GSD+FV
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168
>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
gi|482562457|gb|EOA26647.1| hypothetical protein
CARUB_v10022711mg [Capsella rubella]
Length = 739
Score = 120 bits (301), Expect = 2e-25
Identities = 55/104 (52%), Positives = 80/104 (76%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL +ALS F+S++YA+KVFD+I +PN ++WN LIR+YAS +P +S+ F+ M+ E
Sbjct: 66 ASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVRSIWIFLDMVSE 125
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PNK+T+PF++KA+AE+S+L +G+ LHGM +KS G DLFV
Sbjct: 126 SQCYPNKYTFPFLVKAAAEVSSLSLGQSLHGMAIKSAVGCDLFV 169
>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 118 bits (296), Expect = 7e-25
Identities = 55/104 (52%), Positives = 78/104 (75%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
AS+L A+A S FS++ YA+KVFDQI +PNLYSWN+LIR+ A+ +P +S+L F++ML++
Sbjct: 174 ASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHD 233
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
PNKFT+P +IKA AE VG+ +HGM +K+ FG D+FV
Sbjct: 234 SPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFV 277
>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Glycine max]
Length = 695
Score = 117 bits (293), Expect = 2e-24
Identities = 55/104 (52%), Positives = 74/104 (71%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL+ A A+S S + YA+ VF+QI +PNLY WN LIR YAS +P++S L F+ ML+
Sbjct: 22 ASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHS 81
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
E PNKFT+PF+ KA++ L L +G LHGMV+K+ SDLF+
Sbjct: 82 CSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFI 125
>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Glycine max]
Length = 780
Score = 117 bits (293), Expect = 2e-24
Identities = 55/104 (52%), Positives = 74/104 (71%)
Frame = +3
Query: 3 ASKLIQASALSEFSSIQYAQKVFDQISRPNLYSWNVLIRSYASRKEPSKSLLSFVQMLYE 182
ASKL+ A A+S S + YA+ VF+QI +PNLY WN LIR YAS +P++S L F+ ML+
Sbjct: 107 ASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHS 166
Query: 183 RDELPNKFTYPFVIKASAELSALRVGEGLHGMVLKSEFGSDLFV 314
E PNKFT+PF+ KA++ L L +G LHGMV+K+ SDLF+
Sbjct: 167 CSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFI 210