BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00055204
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat...   160   2e-37
emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]   158   7e-37
ref|XP_006440307.1| hypothetical protein CICLE_v10019350mg [Citr...   139   3e-31
ref|XP_006477182.1| PREDICTED: putative pentatricopeptide repeat...   137   2e-30
ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat...   128   7e-28
ref|XP_004147255.1| PREDICTED: putative pentatricopeptide repeat...   128   7e-28
gb|EOY24327.1| Pentatricopeptide repeat superfamily protein, put...   122   4e-26
ref|XP_004301195.1| PREDICTED: putative pentatricopeptide repeat...   121   1e-25
ref|XP_004511691.1| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat...   113   3e-23
gb|ESW29290.1| hypothetical protein PHAVU_002G058100g, partial [...   102   4e-20
ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago ...   102   4e-20
gb|ABD65008.1| PPR repeat containing protein [Brassica oleracea]      102   8e-20
ref|XP_002863342.1| pentatricopeptide repeat-containing protein ...    99   6e-19
ref|NP_199557.1| pentatricopeptide repeat-containing protein [Ar...    97   3e-18
ref|XP_006282278.1| hypothetical protein CARUB_v10028562mg [Caps...    97   3e-18
gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus pe...    94   3e-17
ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi...    93   5e-17
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe...    93   5e-17
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]      92   1e-16

>ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Vitis vinifera]
           gi|297744381|emb|CBI37355.3| unnamed protein product
           [Vitis vinifera]
          Length = 601

 Score =  160 bits (405), Expect = 2e-37
 Identities = 87/171 (50%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = +1

Query: 34  LRRSFCFKLKKHLPVGNQKKSIHLLWMPISTNTKIS--RPNDFIPWTDIISGSALQQGGV 207
           ++RSF   ++K L   NQ   + L     +   +IS  +  +   W+++    AL QGG 
Sbjct: 1   MQRSFSELVQKCLQNQNQSHQLILRHSHANHVHRISPQKEGESEAWSNLTW--ALTQGGN 58

Query: 208 ISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLT 387
            +E+ALS+AS ++NSG+KPN Y L+HL RA TN     FGQQLHS+IL+ G  SN FV T
Sbjct: 59  RTEIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVST 118

Query: 388 ALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
           AL NFY+  E + +AHN+FVEIPEPS+VSWNSLISGY H+G+FR AL LFL
Sbjct: 119 ALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFL 169



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/153 (24%), Positives = 70/153 (45%)
 Frame = +1

Query: 79  GNQKKSIHLLWMPISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGS 258
           GN + +I +L    S N+          W  II+G   +    +S  AL   S+M +   
Sbjct: 291 GNIEDAIQILSSMPSPNSS--------SWNSIITGYVNRD---LSWEALDFFSKMQSKDI 339

Query: 259 KPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHN 438
           + + +    +       +   +G  +H   +K G + +  V +AL + Y     +  A  
Sbjct: 340 EMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEM 399

Query: 439 IFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
           +F  +P  +LV+WN++ISG+ H+G F + + LF
Sbjct: 400 LFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLF 432


>emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
          Length = 625

 Score =  158 bits (400), Expect = 7e-37
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = +1

Query: 187 ALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHN 366
           AL QGG  +E+ALS+AS ++NSG+KPN Y L+HL RA TN     FGQQLHS+IL+ G  
Sbjct: 76  ALTQGGNRTEIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFG 135

Query: 367 SNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
           SN FV TAL NFY+  E + +AHN+FVEIPEPS+VSWNSLISGY H+G+FR AL LFL
Sbjct: 136 SNVFVSTALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFL 193



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/153 (24%), Positives = 70/153 (45%)
 Frame = +1

Query: 79  GNQKKSIHLLWMPISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGS 258
           GN + +I +L    S N+          W  II+G   +    +S  AL   S+M +   
Sbjct: 315 GNXEDAIQILSSMPSPNSS--------SWNSIITGYVNRD---LSWEALDFFSKMQSKDI 363

Query: 259 KPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHN 438
           + + +    +       +   +G  +H   +K G + +  V +AL + Y     +  A  
Sbjct: 364 EMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEM 423

Query: 439 IFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
           +F  +P  +LV+WN++ISG+ H+G F + + LF
Sbjct: 424 LFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLF 456


>ref|XP_006440307.1| hypothetical protein CICLE_v10019350mg [Citrus clementina]
           gi|557542569|gb|ESR53547.1| hypothetical protein
           CICLE_v10019350mg [Citrus clementina]
          Length = 611

 Score =  139 bits (351), Expect = 3e-31
 Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 11/152 (7%)
 Frame = +1

Query: 118 ISTNTKISRPNDFI-----------PWTDIISGSALQQGGVISEVALSKASQMLNSGSKP 264
           IST+T   R +++I            WT++IS   L QGG+ +E+ + +ASQ+L+SG +P
Sbjct: 30  ISTSTTSLRIDNYIVDDFPQRTGLESWTNVIS--VLAQGGLNTELGVYEASQLLDSGYRP 87

Query: 265 NGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIF 444
           N YVL HL RA ++    ++ QQLH +ILK G  SN FV TAL  FY     + +AH +F
Sbjct: 88  NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 147

Query: 445 VEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
           VEIP+PS+VSWNSLISGYV SGK+RKALNLF+
Sbjct: 148 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFV 179


>ref|XP_006477182.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Citrus sinensis]
          Length = 609

 Score =  137 bits (345), Expect = 2e-30
 Identities = 71/126 (56%), Positives = 92/126 (73%)
 Frame = +1

Query: 163 WTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHS 342
           WT++IS   L QGG+ +E+ + +ASQ+L SG +PN YVL HL RA ++    ++ QQLH 
Sbjct: 54  WTNVIS--VLAQGGLNTELGVYEASQLLVSGYRPNEYVLFHLLRASSDLGWDTYCQQLHC 111

Query: 343 HILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRK 522
           +ILK G  SN FV TAL  FY     + +AH +FVEIP+PS+VSWNSLISGYV SGK+RK
Sbjct: 112 YILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRK 171

Query: 523 ALNLFL 540
           ALNLF+
Sbjct: 172 ALNLFV 177


>ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Cucumis sativus]
          Length = 639

 Score =  128 bits (322), Expect = 7e-28
 Identities = 65/119 (54%), Positives = 86/119 (72%)
 Frame = +1

Query: 184 SALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGH 363
           +AL  GG  +++AL++A + L     PNGY LV L RACT+++  S G QLHS+IL+ G 
Sbjct: 47  TALAGGGHTADLALAEAFRALKCN--PNGYALVQLVRACTSHALDSCGHQLHSYILRSGF 104

Query: 364 NSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
            SN FV TA+ NFY+  E  + AH +F E+P+PSLV+WNSLISGYVH G+FRKAL LF+
Sbjct: 105 ASNVFVGTAMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFI 163



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 56/106 (52%)
 Frame = +1

Query: 220 ALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTN 399
           ALS  ++M +   + + +    +       S   +G  +H  I K G +++  V +AL +
Sbjct: 321 ALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIS 380

Query: 400 FYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
            Y     +N A  IF  +P+ +LVSWN++ISG  H+GK  + ++LF
Sbjct: 381 MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLF 426


>ref|XP_004147255.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Cucumis sativus]
          Length = 582

 Score =  128 bits (322), Expect = 7e-28
 Identities = 65/119 (54%), Positives = 86/119 (72%)
 Frame = +1

Query: 184 SALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGH 363
           +AL  GG  +++AL++A + L     PNGY LV L RACT+++  S G QLHS+IL+ G 
Sbjct: 47  TALAGGGHTADLALAEAFRALKCN--PNGYALVQLVRACTSHALDSCGHQLHSYILRSGF 104

Query: 364 NSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
            SN FV TA+ NFY+  E  + AH +F E+P+PSLV+WNSLISGYVH G+FRKAL LF+
Sbjct: 105 ASNVFVGTAMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFI 163



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 56/106 (52%)
 Frame = +1

Query: 220 ALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTN 399
           ALS  ++M +   + + +    +       S   +G  +H  I K G +++  V +AL +
Sbjct: 321 ALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIS 380

Query: 400 FYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
            Y     +N A  IF  +P+ +LVSWN++ISG  H+GK  + ++LF
Sbjct: 381 MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLF 426


>gb|EOY24327.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 604

 Score =  122 bits (307), Expect = 4e-26
 Identities = 66/130 (50%), Positives = 85/130 (65%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQ 330
           +F  W  +IS   L +GG   ++ L KA+++L SG KP  Y LVHL R  T+    S+ Q
Sbjct: 47  NFETWLTLIS--TLAEGGADMDLTLHKAAKLLRSGIKPYDYSLVHLVRVSTDLDYDSYCQ 104

Query: 331 QLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSG 510
           QLH +ILK G  SN FV  AL  FY   +L  +A  +FVEIP+PS++SWN+LISGYV  G
Sbjct: 105 QLHCYILKSGFVSNVFVSNALMRFYRRIDLPCQAGKLFVEIPQPSVISWNTLISGYVQFG 164

Query: 511 KFRKALNLFL 540
           +FRKAL LFL
Sbjct: 165 QFRKALGLFL 174



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/125 (25%), Positives = 63/125 (50%)
 Frame = +1

Query: 163 WTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHS 342
           WT I++G   +     +  AL   S+M ++  + + +    +       S  ++G  +H 
Sbjct: 316 WTSIMTGYVNRNR---AREALQFFSKMHSNEVELDEFSFSIILSGIAGLSALTWGMLIHC 372

Query: 343 HILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRK 522
             +K G +++  V +AL + Y     +    ++F  +P+ +LV+WN++ISGY H+G   K
Sbjct: 373 CTIKCGLDTSVVVGSALIDMYSKCGRVKNTESMFQSLPKKNLVTWNAMISGYAHNGDSTK 432

Query: 523 ALNLF 537
            + LF
Sbjct: 433 VIQLF 437


>ref|XP_004301195.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/100 (58%), Positives = 73/100 (73%)
 Frame = +1

Query: 241 MLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFEL 420
           ML+SG++PNGY+LV + RA  N      G QLH++IL+ G  SN FV TAL NFYV    
Sbjct: 1   MLSSGTRPNGYLLVQMVRASANLGWDFCGLQLHTYILRSGFRSNVFVSTALINFYVRISS 60

Query: 421 INEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
           ++ AH +F EIP+PS+VSWNSLISGY HSG + KAL+LFL
Sbjct: 61  LSNAHKVFDEIPQPSVVSWNSLISGYAHSGNYSKALSLFL 100



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 38/125 (30%), Positives = 58/125 (46%)
 Frame = +1

Query: 157 IPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQL 336
           + W  +ISG A    G  S+ ALS   Q+  SG   + Y L     AC        G+ +
Sbjct: 77  VSWNSLISGYA--HSGNYSK-ALSLFLQLERSGVSADSYSLTAALGACGQLRFLQLGKSV 133

Query: 337 HSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKF 516
           HS  +K G   +  VL  L + Y    L+ EA+ +F  + E   +SWNS+I+    +G  
Sbjct: 134 HSKTVKLGLQDSTVVLNCLIDMYGKCGLLQEANLVFNNMIERDTISWNSVIAASARNGSL 193

Query: 517 RKALN 531
            +A +
Sbjct: 194 EQAFS 198


>ref|XP_004511691.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Cicer arietinum]
          Length = 525

 Score =  119 bits (299), Expect = 3e-25
 Identities = 56/95 (58%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = +1

Query: 259 KPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFG-HNSNAFVLTALTNFYVNFELINEAH 435
           KPN + LVHL R  T  SC  FGQQLHS+ L+ G H SN +V T+L  FYV    +  AH
Sbjct: 2   KPNAFALVHLIRTATELSCRKFGQQLHSYALRSGYHYSNIYVSTSLIKFYVTIHFLTHAH 61

Query: 436 NIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLFL 540
           N+FVEIP+P++VSWN+LISGYV +GKF+KAL+LF+
Sbjct: 62  NLFVEIPQPNVVSWNTLISGYVQAGKFQKALSLFI 96



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 44/76 (57%)
 Frame = +1

Query: 310 SCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLI 489
           S  ++G  +H   +K+G +S   V TAL + Y      N A +IF  +P  +L+SWN+++
Sbjct: 285 SALTWGMTIHCCTVKYGVDSCVVVGTALIDMYSKCGRANNAESIFNVLPNRNLISWNAML 344

Query: 490 SGYVHSGKFRKALNLF 537
           SGY  +G F +  +LF
Sbjct: 345 SGYARNGDFAQVSSLF 360


>ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Glycine max]
          Length = 585

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/160 (38%), Positives = 101/160 (63%)
 Frame = +1

Query: 58  LKKHLPVGNQKKSIHLLWMPISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKAS 237
           +++ L + N+ +  H   + ++  + ++  N      +++  SA  Q G  +E+AL +AS
Sbjct: 1   MRRFLFLYNEARKFHKPHIHLAFPSPLAYSNIGDSHFNLVDVSA--QSGTNAELALFEAS 58

Query: 238 QMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFE 417
           +    G KPN + LV+L    +N +C SFGQQLHS++++ G+ S+  V T+L   YV   
Sbjct: 59  RR---GIKPNSFALVNLLGLASNLNCPSFGQQLHSYVIRSGYFSHIHVSTSLIKLYVRTH 115

Query: 418 LINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
             ++AH +FVEI EPS+V+WN+LISGYVH+G+FR AL+ F
Sbjct: 116 SFSDAHKLFVEIAEPSVVTWNTLISGYVHTGQFRNALSFF 155


>gb|ESW29290.1| hypothetical protein PHAVU_002G058100g, partial [Phaseolus
           vulgaris]
          Length = 370

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/109 (46%), Positives = 74/109 (67%)
 Frame = +1

Query: 211 SEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHSHILKFGHNSNAFVLTA 390
           +E+AL +AS    SG KPN + LV+L    T   C SFG+QLHS++ + G+ S+  V T+
Sbjct: 9   AELALFEAS----SGIKPNSFALVNLIGLATELKCSSFGKQLHSYVSRSGYFSHIHVSTS 64

Query: 391 LTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
           L  FY      ++AH +F EI EP++V+WN++ISGYVH+G+FR AL+ F
Sbjct: 65  LIKFYSRMHSFSDAHALFDEISEPNVVTWNTMISGYVHAGQFRSALSFF 113


>ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
           gi|355512648|gb|AES94271.1| hypothetical protein
           MTR_5g012660 [Medicago truncatula]
          Length = 519

 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +1

Query: 265 NGYVLVHLTRACTNNSCFSFGQQLHSHILKFGH-NSNAFVLTALTNFYVNFELINEAHNI 441
           N   LV L R  T+     FGQQ+HS+ ++ G+ ++N +V T L  FYV   L   AHN+
Sbjct: 4   NALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNL 63

Query: 442 FVEIPEPSLVSWNSLISGYVHSGKFRKALNLF 537
           FVEIP+P++VSWN+LISGYVH+G+F+KAL+LF
Sbjct: 64  FVEIPQPNVVSWNTLISGYVHAGQFKKALSLF 95


>gb|ABD65008.1| PPR repeat containing protein [Brassica oleracea]
          Length = 583

 Score =  102 bits (253), Expect = 8e-20
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
 Frame = +1

Query: 121 STNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPN--GYVLVHLTR 294
           ST T+    +    WT ++S  AL + GVI   AL  A ++LN G KP+    V+VHL R
Sbjct: 15  STTTRSHVGSTASSWTTVVS--ALARSGVID--ALHAAVELLNDGDKPDDTSSVMVHLLR 70

Query: 295 ACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVS 474
              N+   S  +QLH +++K G+ S   +  +L  FY   + + +AH +F E+P+P ++S
Sbjct: 71  VSGNHGYVSLCRQLHGYVVKHGYVSETRLSNSLMRFYKTSDSLEDAHRLFDEMPDPDVIS 130

Query: 475 WNSLISGYVHSGKFRKALNLFL 540
           WNSL+SGYV SG+ ++ L LFL
Sbjct: 131 WNSLVSGYVQSGRLQEGLCLFL 152


>ref|XP_002863342.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309177|gb|EFH39601.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 576

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 52/126 (41%), Positives = 75/126 (59%)
 Frame = +1

Query: 163 WTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHS 342
           WT I+   AL + G I    L  A +++N G KP    LVHL R   N    S  +QLH 
Sbjct: 24  WTTIVP--ALARFGSIG--VLRAAVELINDGEKPGASPLVHLLRVSGNYGYVSLCRQLHG 79

Query: 343 HILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRK 522
           +++K G  SN  +  +L  FY   + + +AH +F E+P+P ++SWNSL+SGYV SG+F++
Sbjct: 80  YVVKHGFVSNTRLSNSLMRFYKTSDSLEDAHKLFDEMPDPDVISWNSLVSGYVQSGRFQE 139

Query: 523 ALNLFL 540
            L LFL
Sbjct: 140 GLCLFL 145



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 163 WTDIISGSA-LQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLH 339
           W  I++G    +Q G  +E      ++M +SG   + Y L  +  A    +   +G  +H
Sbjct: 288 WNTILTGYVNSEQSGEATEFF----TKMHSSGVGLDEYSLSIVLAAIAALAVVPWGSLIH 343

Query: 340 SHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFR 519
           +  LK G +S   V +AL + Y    ++  A  +F  +P  +L+ WN++ISGY  +G   
Sbjct: 344 ACALKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIMWNAMISGYARNGDSI 403

Query: 520 KALNLF 537
           +A+ LF
Sbjct: 404 EAIKLF 409


>ref|NP_199557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170446|sp|Q9FGL1.1|PP423_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g47460 gi|9758774|dbj|BAB09072.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332008139|gb|AED95522.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/126 (39%), Positives = 75/126 (59%)
 Frame = +1

Query: 163 WTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQLHS 342
           W+ I+   AL + G I    L  A +++N G KP+   LVHL R   N    S  +QLH 
Sbjct: 24  WSTIVP--ALARFGSIG--VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79

Query: 343 HILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKFRK 522
           ++ K G  SN  +  +L  FY   + + +AH +F E+P+P ++SWNSL+SGYV SG+F++
Sbjct: 80  YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139

Query: 523 ALNLFL 540
            + LFL
Sbjct: 140 GICLFL 145


>ref|XP_006282278.1| hypothetical protein CARUB_v10028562mg [Capsella rubella]
           gi|482550982|gb|EOA15176.1| hypothetical protein
           CARUB_v10028562mg [Capsella rubella]
          Length = 579

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 53/139 (38%), Positives = 76/139 (54%)
 Frame = +1

Query: 124 TNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACT 303
           T + +S       WT I+   A       S   L  A +++N G KP+   LVHL R   
Sbjct: 14  TRSHVSSTASSNSWTTIVPALARFD----SIGVLRAAVELINDGEKPDASPLVHLLRVSG 69

Query: 304 NNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNS 483
           N    S  QQLH +++K G  S+  V  +L   Y   + + +AH +F E+PEP ++SWNS
Sbjct: 70  NYGYVSLCQQLHGYVIKHGFVSDTRVSNSLMRSYKTSDSLEDAHKLFDEMPEPDVISWNS 129

Query: 484 LISGYVHSGKFRKALNLFL 540
           L+SGYV SG+F++ L LFL
Sbjct: 130 LVSGYVQSGRFQEGLCLFL 148


>gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus persica]
          Length = 858

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 50/129 (38%), Positives = 73/129 (56%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQ 330
           D + +T +I+  +  + G   E AL    QM   G+KP+ +V   L  AC N S +  G+
Sbjct: 450 DVVAFTSMITAYSQYEQG---EEALKLYLQMQQRGNKPDSFVCSSLLNACANLSAYEQGK 506

Query: 331 QLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSG 510
           Q+H HILKFG  S+AF   +L N Y     I++A   F E+P+  LVSW+++I G    G
Sbjct: 507 QIHVHILKFGFMSDAFAGNSLVNMYAKCGSIDDADRAFSEVPQRGLVSWSAMIGGLAQHG 566

Query: 511 KFRKALNLF 537
             ++ALNLF
Sbjct: 567 HGKRALNLF 575



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 44/140 (31%), Positives = 75/140 (53%)
 Frame = +1

Query: 118 ISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRA 297
           IS   KI++  D + W  +I+G  L +     + AL    QM  SG  PN + L    +A
Sbjct: 238 ISVFEKIAQ-RDIVSWNAVIAGCVLHE---YHDWALQFFGQMNGSGICPNMFTLSSALKA 293

Query: 298 CTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSW 477
           C        G+QLHS ++K    S++FV   L + Y   E+I+ A  +F  +P+  +++W
Sbjct: 294 CAGLGFEKLGRQLHSFLIKMDTESDSFVNVGLIDMYCKCEMIDHARVLFNMMPKKEMIAW 353

Query: 478 NSLISGYVHSGKFRKALNLF 537
           N++ISG+  +G+  +A++ F
Sbjct: 354 NAVISGHSQNGEDIEAVSQF 373



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/129 (34%), Positives = 67/129 (51%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQ 330
           D + W+ +ISG A  Q G+  E ALS   +M + G K N +    + +AC+       G+
Sbjct: 46  DLVSWSALISGYA--QNGLGKE-ALSAFREMHSLGVKCNEFTFPSVLKACSITRDLVVGK 102

Query: 331 QLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSG 510
           Q+H   L  G  S+ FV   L   Y       ++  +F  IPE ++VSWN+L S YV S 
Sbjct: 103 QVHGIALLTGFESDEFVANTLVVMYAKCGEFGDSRRLFDAIPERNVVSWNALFSCYVQSD 162

Query: 511 KFRKALNLF 537
            + +A++LF
Sbjct: 163 SYGEAMDLF 171



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEV---ALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFS 321
           D IP  +++S +AL    V S+    A+    +M+ SG +PN Y L  +  ACT     S
Sbjct: 141 DAIPERNVVSWNALFSCYVQSDSYGEAMDLFQEMILSGVRPNEYSLSSIINACTGLGDGS 200

Query: 322 FGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYV 501
            G+++H +++K G+ S++F   AL + Y   + + +A ++F +I +  +VSWN++I+G V
Sbjct: 201 RGRKIHGYMVKLGYESDSFSANALVDMYAKVKGLEDAISVFEKIAQRDIVSWNAVIAGCV 260


>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Fragaria vesca subsp. vesca]
          Length = 861

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 48/132 (36%), Positives = 75/132 (56%)
 Frame = +1

Query: 142 RPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFS 321
           +  D + +T +I+  A  + G   E AL    QML+ G++P+ +V   L  AC N S + 
Sbjct: 450 KTEDLVAFTSMITAYAQYEQG---EEALKLYVQMLHRGNEPDSFVCSSLLNACANLSAYE 506

Query: 322 FGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYV 501
            G+Q+H HILKFG  S+AF   +L N Y     I +A   F E+P+  +VSW+++I G  
Sbjct: 507 QGKQIHVHILKFGFLSDAFAGNSLVNMYAKCGSIEDAGRAFSEVPQRGIVSWSAMIGGLA 566

Query: 502 HSGKFRKALNLF 537
             G  ++A+N+F
Sbjct: 567 QHGHGKEAINMF 578



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEV---ALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFS 321
           D +   +++S +AL    V S+    A+    +M+ SG +P+ Y L  +   CT      
Sbjct: 144 DVMQERNVVSWNALFSCYVQSDFLLEAMDLFEEMVLSGVRPDEYSLSSIINVCTGLGDGR 203

Query: 322 FGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYV 501
            G++LH +++K G++S+ F   AL + Y     + +A ++F EI +P +VSWN++I+G V
Sbjct: 204 RGRKLHGYVVKLGYDSDLFSANALVDMYAKAICLEDAVSVFEEIAQPDVVSWNAVIAGCV 263

Query: 502 HSGKFRKALNLF 537
                 +AL  F
Sbjct: 264 LHNCHGRALKFF 275



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 42/129 (32%), Positives = 65/129 (50%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQ 330
           D + W+ +ISG A  Q G +S  ALS   +M   G K N +    + +AC+++     G 
Sbjct: 49  DLVAWSALISGYA--QNG-LSREALSAFHEMHGLGVKSNEFTFPSVLKACSSSKDLRLGM 105

Query: 331 QLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSG 510
           Q+H  +   G  S+ FV  AL   Y       +   +F  + E ++VSWN+L S YV S 
Sbjct: 106 QVHGVVYVTGFESDEFVANALVVMYSKCGEFGDTRKLFDVMQERNVVSWNALFSCYVQSD 165

Query: 511 KFRKALNLF 537
              +A++LF
Sbjct: 166 FLLEAMDLF 174



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 39/140 (27%), Positives = 72/140 (51%)
 Frame = +1

Query: 118 ISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRA 297
           +S   +I++P D + W  +I+G  L         AL    Q+  SG +PN + L    +A
Sbjct: 241 VSVFEEIAQP-DVVSWNAVIAGCVLHN---CHGRALKFFRQLGGSGIRPNMFTLSSALKA 296

Query: 298 CTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSW 477
           C   S    G+QLHS ++K    S+++V   L + Y   E++ +A  +   +P+  +++ 
Sbjct: 297 CAGLSFEKLGRQLHSFLVKMDTESDSYVKVGLIDMYCKCEIMTDARLLLNMMPKKDMIAC 356

Query: 478 NSLISGYVHSGKFRKALNLF 537
           N++ISG+    +  +A+ LF
Sbjct: 357 NAVISGHSQMAEDIEAVTLF 376



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 25/69 (36%), Positives = 42/69 (60%)
 Frame = +1

Query: 331 QLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSG 510
           ++H+H+++FG + ++     L N Y        A N+  + PEP LV+W++LISGY  +G
Sbjct: 5   KVHAHLIRFGFSQDSTFRNHLINLYAKSRFFGHARNLLDQCPEPDLVAWSALISGYAQNG 64

Query: 511 KFRKALNLF 537
             R+AL+ F
Sbjct: 65  LSREALSAF 73


>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
 Frame = +1

Query: 136 ISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSC 315
           I  PN  I W  II G +L    +    A+     ML SG +PN Y    L ++C   + 
Sbjct: 93  IENPNQII-WNTIIRGFSLSSKSI---QAVEFYVLMLLSGVEPNSYTFPFLLKSCAKFAA 148

Query: 316 FSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFEL------INEAHNIFVEIPEPSLVSW 477
              G+Q+H H+LK G +S+AFV T+L N Y    L      +++A  +F EIP   +VSW
Sbjct: 149 SHEGKQIHGHVLKLGLDSDAFVHTSLINMYAQNVLSEMWGCMDDARYLFDEIPGRDVVSW 208

Query: 478 NSLISGYVHSGKFRKALNLF 537
           N++ISGY  SG+F +AL LF
Sbjct: 209 NAMISGYAQSGRFEEALALF 228



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVIS---EVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFS 321
           D IP  D++S +A+  G   S   E AL+  S+M  +   PN   +V +  AC  +    
Sbjct: 198 DEIPGRDVVSWNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLE 257

Query: 322 FGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYV 501
            G+ + S I   G  SN  ++ AL + Y     ++ A ++F  + +  ++SWN +I GY 
Sbjct: 258 LGKWVGSWIENRGLGSNLRLVNALIDMYAKCGALDTARSLFDGLQQRDVISWNVMIGGYT 317

Query: 502 HSGKFRKALNLF 537
           H   +++AL LF
Sbjct: 318 HKSHYKEALALF 329



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQ 330
           D I W  +I G   +      + AL+    ML S + PN    + +  AC++      G+
Sbjct: 305 DVISWNVMIGGYTHKSH---YKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLGK 361

Query: 331 QLHSHILK-FGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHS 507
            +H++I K F   +N  + T+L + Y     I  A  +F  +   SL SWN++ISG    
Sbjct: 362 WIHAYIDKNFQSLTNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMISGLAMH 421

Query: 508 GKFRKALNLF 537
           G    AL LF
Sbjct: 422 GHAHTALELF 431


>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
          Length = 688

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 46/141 (32%), Positives = 76/141 (53%)
 Frame = +1

Query: 115 PISTNTKISRPNDFIPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTR 294
           P+       +PN ++ W  +I G          + A+     M   G  PNG+    + +
Sbjct: 67  PLLVFRHTKQPNIYV-WNTVIRGLVSSH---CFDDAIDFYFSMRRQGFLPNGFTFPFVLK 122

Query: 295 ACTNNSCFSFGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVS 474
           AC   S F  G ++H+H++K G + + FV T+L + Y     ++ AH +F EIPE S+VS
Sbjct: 123 ACARLSDFQLGLRIHTHVVKVGFDCDVFVKTSLLSLYAQTGYLDRAHQVFDEIPEKSIVS 182

Query: 475 WNSLISGYVHSGKFRKALNLF 537
           W S+ISGY+  G+F +A+++F
Sbjct: 183 WTSIISGYIGVGRFSEAVSMF 203



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/128 (34%), Positives = 70/128 (54%)
 Frame = +1

Query: 157 IPWTDIISGSALQQGGVISEVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFSFGQQL 336
           + WT IISG      G  SE A+S   + +  G +P+GY LV +  ACT +   S  + +
Sbjct: 181 VSWTSIISGYI--GVGRFSE-AVSMFRRSIEIGLRPDGYNLVRVLSACTQSGDLSSAEWI 237

Query: 337 HSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYVHSGKF 516
             ++ + G   N FV T+L + Y     + +A  +F  +PE  +V W+S+I GYV +G  
Sbjct: 238 DRYLTENGLGRNLFVATSLVDMYAKCGNMEKARIVFDGMPEKDVVCWSSMIQGYVLNGPA 297

Query: 517 RKALNLFL 540
           ++A+ LFL
Sbjct: 298 KEAVELFL 305



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
 Frame = +1

Query: 151 DFIPWTDIISGSALQQGGVIS---EVALSKASQMLNSGSKPNGYVLVHLTRACTNNSCFS 321
           D +P  D++  S++ QG V++   + A+    QML  G KP+ + LV L  AC       
Sbjct: 274 DGMPEKDVVCWSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALE 333

Query: 322 FGQQLHSHILKFGHNSNAFVLTALTNFYVNFELINEAHNIFVEIPEPSLVSWNSLISGYV 501
            G    S I      S   + T L + Y     + +A  +F E+ E  LVSWN+ ISG  
Sbjct: 334 LGNWARSLIDNDEILSVPALGTTLIDMYAKCGSVVQAWEVFKELKEKDLVSWNAAISGLA 393

Query: 502 HSGKFRKALNLF 537
            +G  + A  LF
Sbjct: 394 MNGHVKAAFGLF 405