BLASTX nr result

ID: Rauwolfia21_contig00054354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00054354
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44984.1| unknown [Medicago truncatula]                           74   2e-11
ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arab...    71   2e-10
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ...    66   4e-09
ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    48   2e-08
emb|CBI26620.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm...    60   3e-07

>gb|AFK44984.1| unknown [Medicago truncatula]
          Length = 63

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
 Frame = +3

Query: 183 MVIRVSKGQTRWIFVVPTILLVPSPIRKGVIY---NKVFVLLIPRCSASSPMLPIGTSGV 353
           MVI VSK +TRW+F+VPTIL+ P P +KG IY       VLLIP+ SASSPM PIGTSGV
Sbjct: 1   MVIWVSKIRTRWMFIVPTILVSPDPHKKGRIYFFLQSFLVLLIPKRSASSPMPPIGTSGV 60

Query: 354 VLT 362
            LT
Sbjct: 61  GLT 63


>ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arabidopsis lyrata subsp.
           lyrata] gi|297332729|gb|EFH63147.1| hypothetical protein
           ARALYDRAFT_475597 [Arabidopsis lyrata subsp. lyrata]
          Length = 60

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
 Frame = +3

Query: 183 MVIRVSKGQTRWIFVVPTILLVPSP----IRKGVIYNKVFVLLIPRCSASSPMLPI 338
           MVIRVSK +TRW+F+VPT+L+ P+P     RKG+I+ KVFVLLI R SASSPM PI
Sbjct: 1   MVIRVSKVRTRWMFIVPTMLISPNPNEEEERKGIIFKKVFVLLISRRSASSPMPPI 56


>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251116|gb|AEC06210.1| uncharacterized protein
           AT2G12905 [Arabidopsis thaliana]
          Length = 72

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
 Frame = -3

Query: 341 TNRQHRGRSTTSRNQQYENFVINYPLPY----RARD*KNGWDNKYPSRLSFGYSYNH 183
           TNR+HRGRSTT RNQQ++NF+ N  L +         +NGW+NK+PSR  FGY YNH
Sbjct: 16  TNRRHRGRSTTPRNQQHKNFLKNDSLSFFFFVGIGTNQNGWNNKHPSRSYFGYPYNH 72


>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 48.1 bits (113), Expect(2) = 2e-08
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 242 KNGWDNKYPSRLSFGYSYNHRRLLK 168
           KNGWDNK+PSR   GY YNHRRLLK
Sbjct: 34  KNGWDNKHPSRSYCGYPYNHRRLLK 58



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 303 ESTIRKLCYKLPPSLSGSGLKE 238
           ES  RKLCYKLPP LSG G K+
Sbjct: 13  ESATRKLCYKLPPFLSGIGTKK 34


>emb|CBI26620.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +3

Query: 270 VIYNKVFVLLIPRCSASSPMLPIGTSGVVLTHNTEPLGV 386
           VIYNKVFVLLIPRCSASSP+  IGTSGV LT N E +G+
Sbjct: 405 VIYNKVFVLLIPRCSASSPISTIGTSGVGLTSNIEHIGI 443


>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
           gi|223522895|gb|EEF26886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/52 (67%), Positives = 36/52 (69%)
 Frame = -1

Query: 418 SIVDSSIQRKVTPRGSVLWVNTTPLVPIGSIGEEALHLGINNTKTLL*ITPF 263
           SIVDSSI+RKV P         TPLVPIG I EEAL LGINNTK LL I PF
Sbjct: 62  SIVDSSIERKVNP---------TPLVPIGGIKEEALRLGINNTKPLLEIFPF 104


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