BLASTX nr result

ID: Rauwolfia21_contig00054089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00054089
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA36535.1| TPA: hypothetical protein ZEAMMB73_278731, parti...    59   9e-07
ref|XP_002278371.1| PREDICTED: 40S ribosomal protein S7 isoform ...    58   1e-06
ref|XP_004241632.1| PREDICTED: 40S ribosomal protein S7-like iso...    58   1e-06
ref|XP_004241630.1| PREDICTED: 40S ribosomal protein S7-like iso...    58   1e-06
ref|XP_004235808.1| PREDICTED: 40S ribosomal protein S7-like [So...    58   1e-06
ref|NP_001275109.1| ribosomal protein S7-like protein [Solanum t...    58   1e-06
ref|XP_006353807.1| PREDICTED: 40S ribosomal protein S7-like [So...    56   4e-06
ref|XP_006853690.1| hypothetical protein AMTR_s00056p00135710 [A...    56   6e-06
tpg|DAA36537.1| TPA: hypothetical protein ZEAMMB73_278731 [Zea m...    56   6e-06
tpg|DAA36536.1| TPA: hypothetical protein ZEAMMB73_278731 [Zea m...    56   6e-06
pdb|3J60|H Chain H, Localization Of The Small Subunit Ribosomal ...    55   7e-06
ref|XP_006847231.1| hypothetical protein AMTR_s00017p00257730 [A...    55   7e-06
ref|XP_004984883.1| PREDICTED: 40S ribosomal protein S7-like [Se...    55   7e-06
gb|EMT15303.1| 40S ribosomal protein S7 [Aegilops tauschii]            55   7e-06
gb|AAW50993.1| ribosomal protein S7 [Triticum aestivum] gi|47415...    55   7e-06
tpg|DAA56091.1| TPA: hypothetical protein ZEAMMB73_002867 [Zea m...    55   7e-06
tpg|DAA56090.1| TPA: hypothetical protein ZEAMMB73_002867 [Zea m...    55   7e-06
ref|XP_003573860.1| PREDICTED: 40S ribosomal protein S7-like [Br...    55   7e-06
ref|XP_002459905.1| hypothetical protein SORBIDRAFT_02g014260 [S...    55   7e-06
ref|NP_001131888.1| 40S ribosomal protein S7 isoform 1 [Zea mays...    55   7e-06

>tpg|DAA36535.1| TPA: hypothetical protein ZEAMMB73_278731, partial [Zea mays]
          Length = 48

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFLLCS 241
           PYRLRKAFRKIHVRLVRELEKKFSGKV + ++ +
Sbjct: 15  PYRLRKAFRKIHVRLVRELEKKFSGKVYMLIVAT 48


>ref|XP_002278371.1| PREDICTED: 40S ribosomal protein S7 isoform 1 [Vitis vinifera]
           gi|147789484|emb|CAN71757.1| hypothetical protein
           VITISV_000603 [Vitis vinifera]
           gi|297734220|emb|CBI15467.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRKIHVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGKDVIFI 96


>ref|XP_004241632.1| PREDICTED: 40S ribosomal protein S7-like isoform 3 [Solanum
           lycopersicum]
          Length = 155

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRK+HVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKAFRKVHVRLVRELEKKFSGKDVIFI 96


>ref|XP_004241630.1| PREDICTED: 40S ribosomal protein S7-like isoform 1 [Solanum
           lycopersicum] gi|460392051|ref|XP_004241631.1|
           PREDICTED: 40S ribosomal protein S7-like isoform 2
           [Solanum lycopersicum]
          Length = 191

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRK+HVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKAFRKVHVRLVRELEKKFSGKDVIFI 96


>ref|XP_004235808.1| PREDICTED: 40S ribosomal protein S7-like [Solanum lycopersicum]
           gi|565349218|ref|XP_006341594.1| PREDICTED: 40S
           ribosomal protein S7-like [Solanum tuberosum]
          Length = 191

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRK+HVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKAFRKVHVRLVRELEKKFSGKDVIFI 96


>ref|NP_001275109.1| ribosomal protein S7-like protein [Solanum tuberosum]
           gi|565399723|ref|XP_006365396.1| PREDICTED: 40S
           ribosomal protein S7-1 isoform X2 [Solanum tuberosum]
           gi|565399725|ref|XP_006365397.1| PREDICTED: 40S
           ribosomal protein S7-1 isoform X3 [Solanum tuberosum]
           gi|76160947|gb|ABA40437.1| 40S ribosomal protein S7-like
           protein [Solanum tuberosum] gi|76573341|gb|ABA46775.1|
           unknown [Solanum tuberosum] gi|77999315|gb|ABB17004.1|
           ribosomal protein S7-like protein [Solanum tuberosum]
           gi|82623373|gb|ABB87101.1| 40S ribosomal protein S7-like
           protein-like [Solanum tuberosum]
          Length = 191

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRK+HVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKAFRKVHVRLVRELEKKFSGKDVIFI 96


>ref|XP_006353807.1| PREDICTED: 40S ribosomal protein S7-like [Solanum tuberosum]
          Length = 190

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRKIHVRLVRELEKKFSGK  + +
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGKYVIVI 96


>ref|XP_006853690.1| hypothetical protein AMTR_s00056p00135710 [Amborella trichopoda]
           gi|548857351|gb|ERN15157.1| hypothetical protein
           AMTR_s00056p00135710 [Amborella trichopoda]
          Length = 191

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRKAFRKIHVRLVRELEKKFSGK  + +
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGKDVIMI 96


>tpg|DAA36537.1| TPA: hypothetical protein ZEAMMB73_278731 [Zea mays]
          Length = 109

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKV 262
           PYRLRKAFRKIHVRLVRELEKKFSGK+
Sbjct: 56  PYRLRKAFRKIHVRLVRELEKKFSGKL 82


>tpg|DAA36536.1| TPA: hypothetical protein ZEAMMB73_278731 [Zea mays]
          Length = 109

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKV 262
           PYRLRKAFRKIHVRLVRELEKKFSGK+
Sbjct: 56  PYRLRKAFRKIHVRLVRELEKKFSGKL 82


>pdb|3J60|H Chain H, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome
          Length = 189

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRK FRKIHVRLVRELEKKFSGK  +F+
Sbjct: 63  PYRLRKPFRKIHVRLVRELEKKFSGKDVVFV 93


>ref|XP_006847231.1| hypothetical protein AMTR_s00017p00257730 [Amborella trichopoda]
           gi|548850260|gb|ERN08812.1| hypothetical protein
           AMTR_s00017p00257730 [Amborella trichopoda]
          Length = 192

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGK 91


>ref|XP_004984883.1| PREDICTED: 40S ribosomal protein S7-like [Setaria italica]
          Length = 192

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGK 91


>gb|EMT15303.1| 40S ribosomal protein S7 [Aegilops tauschii]
          Length = 189

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRK FRKIHVRLVRELEKKFSGK  +F+
Sbjct: 63  PYRLRKPFRKIHVRLVRELEKKFSGKDVVFV 93


>gb|AAW50993.1| ribosomal protein S7 [Triticum aestivum]
           gi|474150494|gb|EMS56913.1| 40S ribosomal protein S7
           [Triticum urartu]
          Length = 192

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGKVTLFL 250
           PYRLRK FRKIHVRLVRELEKKFSGK  +F+
Sbjct: 66  PYRLRKPFRKIHVRLVRELEKKFSGKDVVFV 96


>tpg|DAA56091.1| TPA: hypothetical protein ZEAMMB73_002867 [Zea mays]
          Length = 399

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 100 PYRLRKAFRKIHVRLVRELEKKFSGK 125


>tpg|DAA56090.1| TPA: hypothetical protein ZEAMMB73_002867 [Zea mays]
          Length = 513

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 100 PYRLRKAFRKIHVRLVRELEKKFSGK 125


>ref|XP_003573860.1| PREDICTED: 40S ribosomal protein S7-like [Brachypodium distachyon]
          Length = 192

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGK 91


>ref|XP_002459905.1| hypothetical protein SORBIDRAFT_02g014260 [Sorghum bicolor]
           gi|241923282|gb|EER96426.1| hypothetical protein
           SORBIDRAFT_02g014260 [Sorghum bicolor]
          Length = 92

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGK 91


>ref|NP_001131888.1| 40S ribosomal protein S7 isoform 1 [Zea mays]
           gi|195605060|gb|ACG24360.1| 40S ribosomal protein S7
           [Zea mays] gi|195605668|gb|ACG24664.1| 40S ribosomal
           protein S7 [Zea mays] gi|414866347|tpg|DAA44904.1| TPA:
           40S ribosomal protein S7 isoform 1 [Zea mays]
           gi|414866348|tpg|DAA44905.1| TPA: 40S ribosomal protein
           S7 isoform 2 [Zea mays]
          Length = 192

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 342 PYRLRKAFRKIHVRLVRELEKKFSGK 265
           PYRLRKAFRKIHVRLVRELEKKFSGK
Sbjct: 66  PYRLRKAFRKIHVRLVRELEKKFSGK 91


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