BLASTX nr result
ID: Rauwolfia21_contig00053336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00053336
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloropla... 115 8e-24
emb|CAA27989.1| unnamed protein product [Solanum tuberosum] 114 1e-23
ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloropla... 112 4e-23
gb|ABI14811.1| chloroplast photosystem II light-inducible protei... 112 7e-23
gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407... 110 2e-22
gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis] 110 3e-22
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]... 107 2e-21
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide... 107 2e-21
gb|AHA84133.1| chloroplast photosystem II 10 kDa protein [Phaseo... 106 3e-21
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu... 106 4e-21
gb|EMJ13413.1| hypothetical protein PRUPE_ppa013107mg [Prunus pe... 105 5e-21
ref|XP_006836429.1| hypothetical protein AMTR_s00092p00162140 [A... 105 6e-21
gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave ... 105 6e-21
ref|XP_002317015.1| Photosystem II 10 kDa polypeptide family pro... 105 8e-21
emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycope... 104 1e-20
ref|XP_004294212.1| PREDICTED: photosystem II 10 kDa polypeptide... 103 3e-20
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin... 102 4e-20
ref|XP_004488847.1| PREDICTED: photosystem II 10 kDa polypeptide... 102 5e-20
gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum] 102 5e-20
gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat... 102 5e-20
>ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
tuberosum] gi|131399|sp|P06183.1|PSBR_SOLTU RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor gi|21489|emb|CAA28450.1|
ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa
polypeptide [Solanum tuberosum]
Length = 138
Score = 115 bits (287), Expect = 8e-24
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VMSSLSLKPT ++ +S++GLPSLARSS+S ++ A+ VKK+KTD PY
Sbjct: 3 STVMSSLSLKPTFTLEK---TSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPI 92
>emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 114 bits (285), Expect = 1e-23
Identities = 59/93 (63%), Positives = 69/93 (74%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VMSSLSLKPT ++ +S++GLPSLARSS+ ++ A+ VKK+KTD PY
Sbjct: 3 STVMSSLSLKPTFTLEK---TSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 60 RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPI 92
>ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum] gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|1217642|emb|CAA65231.1| PSII
polypeptide [Solanum lycopersicum]
Length = 138
Score = 112 bits (281), Expect = 4e-23
Identities = 60/93 (64%), Positives = 69/93 (74%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VMSSLSLKPT EK+ S++GLPSL RSS+S ++ A+ VKK+KTD PY
Sbjct: 3 STVMSSLSLKPTFTL-EKI--SVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPI 92
>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
terminalis]
Length = 138
Score = 112 bits (279), Expect = 7e-23
Identities = 61/91 (67%), Positives = 68/91 (74%)
Frame = +3
Query: 54 VMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXXXX 233
VMSSLSLK +PF EK S+ +GLPSLAR S+S R+ A+ VKKIKTD PY
Sbjct: 5 VMSSLSLK-ASPFLEK--SAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSLRD 61
Query: 234 XLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRKPKGKGVYQ+ DKYGANVDGYSPI
Sbjct: 62 GLDASGRKPKGKGVYQFVDKYGANVDGYSPI 92
>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
[Lotus japonicus]
Length = 139
Score = 110 bits (275), Expect = 2e-22
Identities = 59/93 (63%), Positives = 68/93 (73%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+S+SLKP EK SS++GLPSL+RSS S R+ A+ KKIKTDTPY
Sbjct: 3 SSVMASVSLKPAGFSLEK--SSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMNL 60
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRKP+GKGVYQY DKYGANVDGYSPI
Sbjct: 61 RNGVDASGRKPRGKGVYQYVDKYGANVDGYSPI 93
>gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 110 bits (274), Expect = 3e-22
Identities = 60/96 (62%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA S+ MSSL+LKP TP E+ SS++GLPSL RSS+S ++ A+ KKIKT TPY
Sbjct: 1 MAASM-MSSLALKPATPVFER--SSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGG 57
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 MNLPAGLDASGRKQKGKGVYQFVDKYGANVDGYSPI 93
>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 137
Score = 107 bits (267), Expect = 2e-21
Identities = 62/96 (64%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV M+SLSLKP+ EK SS++GLP+L+R S +I A+ VKKIKTDTPY
Sbjct: 1 MAASV-MASLSLKPSPFTVEK--SSVRGLPTLSRRS--FKIEASGVKKIKTDTPYGTGGG 55
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 56 MNLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPI 91
>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera] gi|147789486|emb|CAN71762.1| hypothetical
protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product
[Vitis vinifera]
Length = 139
Score = 107 bits (266), Expect = 2e-21
Identities = 61/96 (63%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV MSSLSLKP+ PF + +++GLPSLARSS+S R+ A+ KKIKTD PY
Sbjct: 1 MAASV-MSSLSLKPS-PFSVE-RRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGG 57
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 MKLSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPI 93
>gb|AHA84133.1| chloroplast photosystem II 10 kDa protein [Phaseolus vulgaris]
gi|561022523|gb|ESW21253.1| hypothetical protein
PHAVU_005G055200g [Phaseolus vulgaris]
Length = 139
Score = 106 bits (265), Expect = 3e-21
Identities = 57/93 (61%), Positives = 68/93 (73%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+S++LKP EK SS++GLPSL+R+S+S R+ A+ KKIKTDTPY
Sbjct: 3 SSVMASVALKPAPFTVEK--SSVRGLPSLSRNSSSFRVVASGGKKIKTDTPYGISGGMNL 60
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRK KGKGVYQY DKYGANVDGYSPI
Sbjct: 61 RDGVDASGRKGKGKGVYQYVDKYGANVDGYSPI 93
>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|566154457|ref|XP_006370466.1| Photosystem II 10 kDa
polypeptide family protein [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus
trichocarpa] gi|550349659|gb|ERP67035.1| Photosystem II
10 kDa polypeptide family protein [Populus trichocarpa]
Length = 137
Score = 106 bits (264), Expect = 4e-21
Identities = 61/96 (63%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV M+SLSLKP+ EK SS++GLP+L+R + +I A+ VKKIKTDTPY
Sbjct: 1 MAASV-MASLSLKPSPFTVEK--SSVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGG 55
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 56 MNLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPI 91
>gb|EMJ13413.1| hypothetical protein PRUPE_ppa013107mg [Prunus persica]
Length = 139
Score = 105 bits (263), Expect = 5e-21
Identities = 58/96 (60%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV M+S+SLKP+ EK S+++GLPSLAR+S+S ++ A+ KKIKTDTPY
Sbjct: 1 MAASV-MASVSLKPSPFTVEK--SAVRGLPSLARTSSSFKVQASGGKKIKTDTPYGTGGG 57
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
DASGRKP GKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 MNLKDGKDASGRKPTGKGVYQFVDKYGANVDGYSPI 93
>ref|XP_006836429.1| hypothetical protein AMTR_s00092p00162140 [Amborella trichopoda]
gi|548838947|gb|ERM99282.1| hypothetical protein
AMTR_s00092p00162140 [Amborella trichopoda]
Length = 141
Score = 105 bits (262), Expect = 6e-21
Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKK-IKTDTPYXXXX 215
MA S + S LSLKP++P K S+++GLPSL SS S ++ A+ VKK IKTDTPY
Sbjct: 1 MATSPLASPLSLKPSSPLIAK--SNVRGLPSLTTSSFSFKVQASSVKKKIKTDTPYGPGG 58
Query: 216 XXXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 59 GMSLKDGLDASGRKQKGKGVYQFVDKYGANVDGYSPI 95
>gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 105 bits (262), Expect = 6e-21
Identities = 55/95 (57%), Positives = 68/95 (71%)
Frame = +3
Query: 42 AGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXX 221
A + VMSS ++P++PF E+ A + + LPSLARSS+SLR+ A+ KKI+T TPY
Sbjct: 5 ATATVMSSFFVRPSSPFLERSAQA-KALPSLARSSSSLRVEASAKKKIQTATPYGINGGL 63
Query: 222 XXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
DASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 64 SLKDGADASGRKAKGKGVYQFVDKYGANVDGYSPI 98
>ref|XP_002317015.1| Photosystem II 10 kDa polypeptide family protein [Populus
trichocarpa] gi|566195489|ref|XP_006377857.1|
hypothetical protein POPTR_0011s14540g [Populus
trichocarpa] gi|118488264|gb|ABK95951.1| unknown
[Populus trichocarpa] gi|222860080|gb|EEE97627.1|
Photosystem II 10 kDa polypeptide family protein
[Populus trichocarpa] gi|550328393|gb|ERP55654.1|
hypothetical protein POPTR_0011s14540g [Populus
trichocarpa]
Length = 137
Score = 105 bits (261), Expect = 8e-21
Identities = 60/96 (62%), Positives = 70/96 (72%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV M+SL+LKP+ EK SS++GLP+L+R S +I A+ VKKIKTDTPY
Sbjct: 1 MAASV-MASLNLKPSPFTVEK--SSVRGLPTLSRRS--FKIEASGVKKIKTDTPYGTGGG 55
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRKP+GKGVYQY DKYGANVDGYSPI
Sbjct: 56 MNLRNGLDASGRKPRGKGVYQYVDKYGANVDGYSPI 91
>emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 104 bits (259), Expect = 1e-20
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = +3
Query: 66 LSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXXXXXLDA 245
LSLKPT EK+ S++GLPSL RSS+S ++ A VKK+KTD PY +DA
Sbjct: 1 LSLKPTFTL-EKI--SVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDA 57
Query: 246 SGRKPKGKGVYQYTDKYGANVDGYSPI 326
SGRKPKGKGVYQY DKYGANVDGYSPI
Sbjct: 58 SGRKPKGKGVYQYVDKYGANVDGYSPI 84
>ref|XP_004294212.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 139
Score = 103 bits (256), Expect = 3e-20
Identities = 58/96 (60%), Positives = 68/96 (70%)
Frame = +3
Query: 39 MAGSVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXX 218
MA SV M+S+SLKP EK S+++GLPSLAR+S S ++ A+ KKIKT TPY
Sbjct: 1 MAASV-MASVSLKPAPFSFEK--SAVRGLPSLARTSASFKVQASGGKKIKTATPYGTGGG 57
Query: 219 XXXXXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRK KGKGVYQY DKYGANVDGYSPI
Sbjct: 58 MNLRDGVDASGRKGKGKGVYQYVDKYGANVDGYSPI 93
>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 102 bits (255), Expect = 4e-20
Identities = 55/93 (59%), Positives = 67/93 (72%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+S++LKP EK SS++GLPSL+R+S+S R+ A+ KKIKTD PY
Sbjct: 3 SSVMASVALKPAPFTVEK--SSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMAL 60
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
+DASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 61 REGVDASGRKGKGKGVYQFVDKYGANVDGYSPI 93
>ref|XP_004488847.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Cicer arietinum]
Length = 136
Score = 102 bits (254), Expect = 5e-20
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+SLSLKPT EK SS++GLPS++R R+ A+ +KKIKTDTPY
Sbjct: 3 SSVMASLSLKPTPFTIEK--SSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDL 57
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 PNGLDASGRKQKGKGVYQFVDKYGANVDGYSPI 90
>gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
Length = 106
Score = 102 bits (254), Expect = 5e-20
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+SLSLKPT EK SS++GLPS++R R+ A+ +KKIKTDTPY
Sbjct: 3 SSVMASLSLKPTPFTIEK--SSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDL 57
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 PNGLDASGRKQKGKGVYQFVDKYGANVDGYSPI 90
>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
Length = 136
Score = 102 bits (254), Expect = 5e-20
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +3
Query: 48 SVVMSSLSLKPTTPFQEKVASSIQGLPSLARSSTSLRISANQVKKIKTDTPYXXXXXXXX 227
S VM+S+SLKPT EK SS++GLP+L+R R+ A+ VKKIKTDTPY
Sbjct: 3 SSVMASVSLKPTPFMVEK--SSVRGLPNLSRP---FRVVASGVKKIKTDTPYGTGGGMDL 57
Query: 228 XXXLDASGRKPKGKGVYQYTDKYGANVDGYSPI 326
LDASGRK KGKGVYQ+ DKYGANVDGYSPI
Sbjct: 58 PNGLDASGRKQKGKGVYQFVDKYGANVDGYSPI 90