BLASTX nr result

ID: Rauwolfia21_contig00051824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00051824
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
gb|EMJ20061.1| hypothetical protein PRUPE_ppa002838mg [Prunus pe...    87   2e-15
gb|EOX98065.1| Mitochondrial editing factor 21 [Theobroma cacao]       86   7e-15
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    82   6e-14
gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]      82   9e-14
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...    79   8e-13
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13

>ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum lycopersicum]
          Length = 625

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = +1

Query: 229 MLNNLVQSLIQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMVAM 408
           ML  ++Q L QN    S Y  IFQFL+G+N +KL QQ+HAHMA+RG+ PN  +AAKMVAM
Sbjct: 1   MLKIILQPLYQNSFPPSTYASIFQFLVGKNFVKLGQQVHAHMAVRGVSPNGLVAAKMVAM 60

Query: 409 YASSGDIISAFHLF 450
           YASSG+I SA ++F
Sbjct: 61  YASSGEIDSASYIF 74


>gb|EMJ20061.1| hypothetical protein PRUPE_ppa002838mg [Prunus persica]
          Length = 628

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +1

Query: 223 RAMLNNLVQSLIQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMV 402
           R +L +L   L Q+P  +SFY PIFQ L  QN LKL QQ+HA MALRGL PNAFL AKMV
Sbjct: 4   RTLLKSL---LAQDPTCISFYAPIFQSLTSQNLLKLGQQVHAQMALRGLEPNAFLGAKMV 60

Query: 403 AMYASSGDIISAFHLF 450
           AMYASS ++ SA ++F
Sbjct: 61  AMYASSDNLDSAVNIF 76


>gb|EOX98065.1| Mitochondrial editing factor 21 [Theobroma cacao]
          Length = 613

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = +1

Query: 232 LNNLVQSLI-QNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMVAM 408
           L  L+Q +  QN  + S Y P+FQFL  +NCLKL QQ+H+HM L GL PNAFL AKMVAM
Sbjct: 49  LQTLLQPISNQNAPRHSSYAPLFQFLTARNCLKLGQQIHSHMTLHGLQPNAFLGAKMVAM 108

Query: 409 YASSGDIISAFHLF 450
           YAS GD+ SA  +F
Sbjct: 109 YASLGDLESAVTIF 122


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 48/84 (57%), Positives = 56/84 (66%)
 Frame = +1

Query: 199 KPSLSNSGRAMLNNLVQSLIQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPN 378
           KPSL+   R +L  ++Q     PH  S Y PIFQFL   N +KL QQ HA + L GL PN
Sbjct: 56  KPSLNLQLRILLQPILQHF---PHPSS-YAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPN 111

Query: 379 AFLAAKMVAMYASSGDIISAFHLF 450
           AFLAAKMVAMYASSGD+ SA  +F
Sbjct: 112 AFLAAKMVAMYASSGDLDSAVVVF 135


>gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]
          Length = 672

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 40/73 (54%), Positives = 56/73 (76%)
 Frame = +1

Query: 232 LNNLVQSLIQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMVAMY 411
           L + ++SL Q+P Q+S Y  IFQ L G+N L+L +Q+H+HM+LR L P+AFL AKM+AMY
Sbjct: 49  LVSTLRSLAQDPPQVSSYAAIFQSLTGKNLLRLGRQVHSHMSLRALEPDAFLGAKMIAMY 108

Query: 412 ASSGDIISAFHLF 450
           AS+GD+ SA  +F
Sbjct: 109 ASAGDLRSAVAVF 121


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +1

Query: 226 AMLNNLVQSL-IQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMV 402
           A L NL+Q L    P  +  Y P+FQFL G N LKL  Q+HAHM LRGL P A + +KMV
Sbjct: 53  ATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMV 112

Query: 403 AMYASSGDIISAFHLF 450
           A YASSGDI S+  +F
Sbjct: 113 AFYASSGDIDSSVSVF 128


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +1

Query: 226 AMLNNLVQSL-IQNPHQLSFYTPIFQFLIGQNCLKLSQQLHAHMALRGLIPNAFLAAKMV 402
           A L NL+Q L    P  +  Y P+FQFL G N LKL  Q+HAHM LRGL P A + +KMV
Sbjct: 53  ATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMV 112

Query: 403 AMYASSGDIISAFHLF 450
           A YASSGDI S+  +F
Sbjct: 113 AFYASSGDIDSSVSVF 128


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