BLASTX nr result

ID: Rauwolfia21_contig00050867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050867
         (254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    139   5e-31
ref|XP_006826167.1| hypothetical protein AMTR_s04947p00003620 [A...   129   3e-28
ref|XP_006494715.1| PREDICTED: uncharacterized protein LOC102612...   127   2e-27
emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]   125   4e-27
ref|XP_004492121.1| PREDICTED: uncharacterized protein LOC101498...   122   5e-26
emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]   113   2e-23
gb|AAB18645.1| unknown [Hordeum vulgare]                              107   2e-21
ref|XP_006485841.1| PREDICTED: uncharacterized protein LOC102619...   103   2e-20
gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]             102   4e-20
ref|XP_004301918.1| PREDICTED: uncharacterized protein LOC101298...   102   5e-20
gb|AAF24531.1|AC007534_12 F7F22.17 [Arabidopsis thaliana]             102   7e-20
pir||C85079 hypothetical protein AT4g08050 [imported] - Arabidop...   101   1e-19
gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabid...   101   1e-19
pir||S66306 hypothetical protein 1 - Arabidopsis thaliana retrot...   100   2e-19
gb|AEL30354.1| retrotransposon gag protein [Arachis hypogaea]         100   2e-19
gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]             100   3e-19
gb|EXB92318.1| ATP-dependent RNA helicase dhx8 [Morus notabilis]       98   1e-18
gb|AAF67381.1| Hypothetical protein T15F17.m [Arabidopsis thaliana]    98   1e-18
emb|CAB81134.1| putative athila transposon protein [Arabidopsis ...    98   1e-18
ref|XP_004298227.1| PREDICTED: uncharacterized protein LOC101307...    97   2e-18

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  139 bits (349), Expect = 5e-31
 Identities = 61/84 (72%), Positives = 77/84 (91%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VS+DAI+LRLFPFSLRD+A++WL+SLPPGSITTWD L+E FL+KYFPP++TA+LRN I +
Sbjct: 4   VSDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITT 63

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q +GESLYD+WER+K+LLR CP
Sbjct: 64  FTQKEGESLYDAWERYKDLLRMCP 87


>ref|XP_006826167.1| hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]
           gi|548830333|gb|ERM93404.1| hypothetical protein
           AMTR_s04947p00003620 [Amborella trichopoda]
          Length = 379

 Score =  129 bits (325), Expect = 3e-28
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSE+ +RL+LFPFSLRDRA+SWL +LPP S+T W+ LAEKFL KYFPP R A+ R++I S
Sbjct: 91  VSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSEIMS 150

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           FQQ++ ES  D+WER+KELLRKCP
Sbjct: 151 FQQLEDESTSDAWERFKELLRKCP 174


>ref|XP_006494715.1| PREDICTED: uncharacterized protein LOC102612045 [Citrus sinensis]
          Length = 810

 Score =  127 bits (319), Expect = 2e-27
 Identities = 57/83 (68%), Positives = 71/83 (85%)
 Frame = -3

Query: 249 SEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFSF 70
           S++A+RLRLF FSLRDRA++WL SLPP SITTW  LA+KFL KYFPP + A+LRN+I SF
Sbjct: 119 SQEALRLRLFSFSLRDRARAWLNSLPPDSITTWSDLADKFLLKYFPPTKNAKLRNEITSF 178

Query: 69  QQMDGESLYDSWERWKELLRKCP 1
            Q++ ESL D+WER+KELLR+CP
Sbjct: 179 HQLEDESLCDAWERFKELLRRCP 201


>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score =  125 bits (315), Expect = 4e-27
 Identities = 56/84 (66%), Positives = 72/84 (85%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V++DAIRLRLFPFSL ++AK+WL SLPPG+ITTWD L   FL+KYFP A++ ++RNDI +
Sbjct: 27  VTDDAIRLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLAKYFPLAKSTKMRNDITN 86

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q D ESLY++WER+K+LLRKCP
Sbjct: 87  FLQQDQESLYEAWERFKDLLRKCP 110


>ref|XP_004492121.1| PREDICTED: uncharacterized protein LOC101498022 [Cicer arietinum]
          Length = 544

 Score =  122 bits (306), Expect = 5e-26
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V+ D IRLRLFPF LRDRA++WL SLP  SITTWD L + FL +YFPP++TA+LRN I S
Sbjct: 34  VTYDTIRLRLFPFPLRDRARAWLHSLPSESITTWDQLKQAFLGRYFPPSKTAQLRNQITS 93

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q +GESLY++WE +KE+LR CP
Sbjct: 94  FSQKEGESLYEAWENFKEMLRLCP 117


>emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]
          Length = 437

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V +DAIRLRLFPFSL ++AK+WL SLPPG+ITTWD L   FL+KYFPPA++ ++RNDI +
Sbjct: 289 VIDDAIRLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLTKYFPPAKSIKMRNDITN 348

Query: 72  FQQMDGESLYDSWERWKEL 16
           F Q D ESLY++WER  EL
Sbjct: 349 FLQQDQESLYEAWERKLEL 367


>gb|AAB18645.1| unknown [Hordeum vulgare]
          Length = 337

 Score =  107 bits (266), Expect = 2e-21
 Identities = 46/84 (54%), Positives = 61/84 (72%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V  D I+L+LFPFSLRDRAK+W  SLP  SI +WD   + ++SKYFPPA+   LRNDI +
Sbjct: 74  VDNDVIKLKLFPFSLRDRAKTWFSSLPKSSIDSWDKCKDAYISKYFPPAKIISLRNDIMN 133

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F+Q+D E +  +WER K ++R CP
Sbjct: 134 FKQLDHEHVAQAWERMKLMIRNCP 157


>ref|XP_006485841.1| PREDICTED: uncharacterized protein LOC102619730 [Citrus sinensis]
          Length = 698

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/84 (54%), Positives = 61/84 (72%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V+E+ I+LR FPFSL   AK WL  LPPG ITTW+ L ++FL KYFP +R A +R DI+ 
Sbjct: 134 VTEEHIKLRTFPFSLDGLAKDWLYYLPPGLITTWNGLNKQFLEKYFPASRAANIRKDIYG 193

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
            +Q+ GE+LY+ WER+K+L   CP
Sbjct: 194 IRQLPGETLYEYWERFKQLCASCP 217


>gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]
          Length = 1586

 Score =  102 bits (255), Expect = 4e-20
 Identities = 47/84 (55%), Positives = 61/84 (72%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W KSLP GSIT+W+   + FL+K+F  +RTARLRNDI  
Sbjct: 113 VSEDGFKLRLFPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAKFFSNSRTARLRNDISG 172

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q + E+ Y++WER+K    +CP
Sbjct: 173 FTQTNNETFYEAWERFKGYQTQCP 196


>ref|XP_004301918.1| PREDICTED: uncharacterized protein LOC101298139 [Fragaria vesca
           subsp. vesca]
          Length = 793

 Score =  102 bits (254), Expect = 5e-20
 Identities = 44/81 (54%), Positives = 61/81 (75%)
 Frame = -3

Query: 243 DAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFSFQQ 64
           + ++L LFPFSL+D AK WL SLP G ITTWD + +KFL ++FP   T +LR +I +F Q
Sbjct: 149 EGLKLLLFPFSLKDEAKHWLYSLPAGIITTWDGMVKKFLKQFFPAQLTKKLRREIQNFTQ 208

Query: 63  MDGESLYDSWERWKELLRKCP 1
            DG++LY++WE ++EL RKCP
Sbjct: 209 KDGDTLYEAWEEFQELQRKCP 229


>gb|AAF24531.1|AC007534_12 F7F22.17 [Arabidopsis thaliana]
          Length = 1799

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/84 (58%), Positives = 59/84 (70%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W K+LP  SITTWD   + FLSK+F  ARTARLRN+I  
Sbjct: 64  VSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKKVFLSKFFSNARTARLRNEISG 123

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q  GES  ++WER+K    +CP
Sbjct: 124 FSQKTGESFCEAWERFKGYTNQCP 147


>pir||C85079 hypothetical protein AT4g08050 [imported] - Arabidopsis thaliana
           gi|5724774|gb|AAD48078.1|AF160183_5 contains similarity
           to retrotransposons; may be a pseudogene [Arabidopsis
           thaliana] gi|7267445|emb|CAB81142.1| AT4g08050
           [Arabidopsis thaliana]
          Length = 1428

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W K+L   SITTWD   + FLSK+F  ARTARLRN+I+ 
Sbjct: 81  VSEDGFKLRLFPFSLGDKAHIWEKNLSHDSITTWDDYKKAFLSKFFSNARTARLRNEIYG 140

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q  GES  ++WER+K    +CP
Sbjct: 141 FSQKTGESFCEAWERFKGYTNQCP 164


>gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
          Length = 622

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           +SEDA +LRLFPFSL DRA+ W K+LP  SIT+WD     FLSK+F   RTARLRN+I S
Sbjct: 99  ISEDAFKLRLFPFSLGDRARIWEKNLPQRSITSWDQCKRAFLSKFFSTTRTARLRNEISS 158

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q   ES  ++WER+K    +CP
Sbjct: 159 FTQRSNESFCEAWERFKGYKMQCP 182


>pir||S66306 hypothetical protein 1 - Arabidopsis thaliana retrotransposon
           Athila gi|806535|emb|CAA57397.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 935

 Score =  100 bits (250), Expect = 2e-19
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W K+LP GSITTWD   + FL+K+F  +RTARLRN+I  
Sbjct: 113 VSEDGFKLRLFPFSLGDKAHLWEKTLPHGSITTWDDCKKAFLAKFFSNSRTARLRNEISG 172

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q   ES  ++WER+K    KCP
Sbjct: 173 FTQKQNESFCEAWERFKGYPTKCP 196


>gb|AEL30354.1| retrotransposon gag protein [Arachis hypogaea]
          Length = 920

 Score =  100 bits (249), Expect = 2e-19
 Identities = 42/84 (50%), Positives = 63/84 (75%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           V+ +  +L LFPF+LRD+AK WL S P  S+ TW+ +  KFL+K+FPP +  +LR ++ +
Sbjct: 192 VNPEVYKLMLFPFALRDKAKLWLDSQPKESLNTWEKVVTKFLTKFFPPKKLTKLRLEVQT 251

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F+Q DGE+LY++WER+K L R+CP
Sbjct: 252 FKQKDGETLYEAWERYKLLTRQCP 275


>gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]
          Length = 1862

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W K+LP  SITTWD   + FLSK+F  ARTARLRN+I  
Sbjct: 199 VSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKKAFLSKFFSNARTARLRNEISG 258

Query: 72  FQQMDGESLYDSWERWKELLRKC 4
           F Q  GES  ++WER+K    +C
Sbjct: 259 FSQKTGESFCEAWERFKGYTNQC 281


>gb|EXB92318.1| ATP-dependent RNA helicase dhx8 [Morus notabilis]
          Length = 941

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 43/81 (53%), Positives = 58/81 (71%)
 Frame = -3

Query: 243 DAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFSFQQ 64
           D++RL+ FPFSL+D+AKSWL SL P SI TW+ +   F +KYFP  +T  L+  I +F Q
Sbjct: 687 DSVRLKFFPFSLKDKAKSWLYSLRPRSIGTWEEITTAFFNKYFPHHKTNGLKRQISTFTQ 746

Query: 63  MDGESLYDSWERWKELLRKCP 1
            D E+LY  WER+K+LL +CP
Sbjct: 747 KDNETLYQVWERFKDLLNQCP 767


>gb|AAF67381.1| Hypothetical protein T15F17.m [Arabidopsis thaliana]
          Length = 346

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/84 (55%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VSED  +LRLFPFSL D+A  W K+LP GSITTWD   + FL K+F  +RTARL N+I  
Sbjct: 81  VSEDGFKLRLFPFSLGDKAHLWEKTLPQGSITTWDDCKKVFLEKFFSNSRTARLWNEISG 140

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q   ES  ++WER+K    KCP
Sbjct: 141 FTQKQNESFCEAWERFKGYQTKCP 164


>emb|CAB81134.1| putative athila transposon protein [Arabidopsis thaliana]
          Length = 866

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/84 (55%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           VS D  +LRLFPFSL D+A  W K+LP  SI TWD   + FLSK+F  ARTARLRN+I  
Sbjct: 81  VSADGFKLRLFPFSLGDKAHIWEKNLPHDSIITWDDCKKAFLSKFFSNARTARLRNEISG 140

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q  GES  ++WER+K    +CP
Sbjct: 141 FSQKTGESFCEAWERFKGYTNQCP 164


>ref|XP_004298227.1| PREDICTED: uncharacterized protein LOC101307394 [Fragaria vesca
           subsp. vesca]
          Length = 516

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 41/84 (48%), Positives = 61/84 (72%)
 Frame = -3

Query: 252 VSEDAIRLRLFPFSLRDRAKSWLKSLPPGSITTWDTLAEKFLSKYFPPARTARLRNDIFS 73
           ++ + ++L LFPF+L+D AK WL SLP G IT W+ +  KFL ++FP   T +LR +I +
Sbjct: 23  LTPEGLKLLLFPFTLKDDAKRWLYSLPAGIITNWNEMTSKFLKQFFPAQLTKKLRREIQN 82

Query: 72  FQQMDGESLYDSWERWKELLRKCP 1
           F Q DG++LY++WE ++EL RKCP
Sbjct: 83  FTQKDGDTLYEAWEEFQELQRKCP 106


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