BLASTX nr result

ID: Rauwolfia21_contig00050857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050857
         (519 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485890.1| PREDICTED: general transcription factor IIF ...    57   2e-06
ref|XP_006436265.1| hypothetical protein CICLE_v10032402mg [Citr...    57   2e-06
ref|XP_006360617.1| PREDICTED: general transcription factor IIF ...    56   4e-06
ref|XP_004248686.1| PREDICTED: transcription initiation factor I...    56   4e-06

>ref|XP_006485890.1| PREDICTED: general transcription factor IIF subunit 2-like isoform
           X1 [Citrus sinensis]
          Length = 274

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -3

Query: 517 LKLLCVYNNKGSNQGTYELKPEYKTPKDGPDS 422
           LK LCVYNNKGSNQG+YELKPEYK   DGP S
Sbjct: 243 LKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 274


>ref|XP_006436265.1| hypothetical protein CICLE_v10032402mg [Citrus clementina]
           gi|568865039|ref|XP_006485891.1| PREDICTED: general
           transcription factor IIF subunit 2-like isoform X2
           [Citrus sinensis] gi|557538461|gb|ESR49505.1|
           hypothetical protein CICLE_v10032402mg [Citrus
           clementina]
          Length = 271

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -3

Query: 517 LKLLCVYNNKGSNQGTYELKPEYKTPKDGPDS 422
           LK LCVYNNKGSNQG+YELKPEYK   DGP S
Sbjct: 240 LKDLCVYNNKGSNQGSYELKPEYKKAADGPAS 271


>ref|XP_006360617.1| PREDICTED: general transcription factor IIF subunit 2-like [Solanum
           tuberosum]
          Length = 276

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 517 LKLLCVYNNKGSNQGTYELKPEYKTPKDGPDS 422
           LKLLC+YNNKG++QGTYELKPEYK  +D  DS
Sbjct: 245 LKLLCIYNNKGAHQGTYELKPEYKRTEDKTDS 276


>ref|XP_004248686.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Solanum lycopersicum]
          Length = 276

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 517 LKLLCVYNNKGSNQGTYELKPEYKTPKDGPDS 422
           LKLLC+YNNKG++QGTYELKPEYK  +D  DS
Sbjct: 245 LKLLCIYNNKGAHQGTYELKPEYKRAEDKTDS 276


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