BLASTX nr result

ID: Rauwolfia21_contig00050836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050836
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238502.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
ref|XP_006359053.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
gb|ESW03397.1| hypothetical protein PHAVU_011G010900g [Phaseolus...    61   2e-07
gb|EPS70180.1| hypothetical protein M569_04582 [Genlisea aurea]        56   4e-06

>ref|XP_004238502.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Solanum lycopersicum]
          Length = 574

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = -1

Query: 184 AYVEGLVRKGTTSPHIKQLQAHLITTGLFNYHLSRAKLIDFCATSSAGSFTYAKFVFDRI 5
           AYV+ L+ K T    +KQLQAHLI TG F ++  RAK +DFCA SSAG+  YA  +F  I
Sbjct: 2   AYVDSLLSKCTCFSKLKQLQAHLIITGNFQFYTCRAKFLDFCAVSSAGNLPYATHIFRHI 61


>ref|XP_006359053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Solanum tuberosum]
          Length = 574

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = -1

Query: 184 AYVEGLVRKGTTSPHIKQLQAHLITTGLFNYHLSRAKLIDFCATSSAGSFTYAKFVFDRI 5
           AYV+ L+ K T    +KQLQAHLI TG F ++  RAK +DFCA SSAG+  YA  +F  I
Sbjct: 2   AYVDTLLSKCTCFSKLKQLQAHLIITGNFQFYTCRAKFLDFCAVSSAGNLPYATHIFRHI 61


>gb|ESW03397.1| hypothetical protein PHAVU_011G010900g [Phaseolus vulgaris]
          Length = 577

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -1

Query: 178 VEGLVRKGTTSPHIKQLQAHLITTGLFNYHLSRAKLIDFCATSSAGSFTYAKFVFDRI 5
           ++ L++K T+   +KQLQAHLITTG F +H SRAKL++ C+ S AG  ++A  +F RI
Sbjct: 7   LDSLLQKCTSLISMKQLQAHLITTGKFQFHPSRAKLLELCSISPAGDLSFAGQIFRRI 64


>gb|EPS70180.1| hypothetical protein M569_04582 [Genlisea aurea]
          Length = 577

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = -1

Query: 184 AYVEGLVRKGTTSPHIKQLQAHLITTGLFNYHLSRAKLIDFCAT--SSAGSFTYAKFVFD 11
           AYVE L+    +  H++Q+ AHL+ TGLF ++  RAK +D+CAT  SS      A F F 
Sbjct: 2   AYVESLLHNCASFSHVRQIHAHLLATGLFQFYPYRAKFLDYCATAFSSGLRHAVAAFPFI 61

Query: 10  RIP 2
           R+P
Sbjct: 62  RLP 64


Top