BLASTX nr result

ID: Rauwolfia21_contig00050737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050737
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    67   3e-09
ref|XP_004174144.1| PREDICTED: uncharacterized protein LOC101232...    64   3e-08
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    56   4e-06
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]    56   6e-06
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    55   7e-06
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    55   1e-05

>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -3

Query: 229 PHLISSTHADTSILAPTQPAIRKSSREHHPPSYLKDYICN--SVHTLPHPLSSVLHYDRL 56
           PH+ +S     +   P     RKSSR HHPPSYLKD+ CN  S ++ P PL+  L Y+  
Sbjct: 709 PHISNSGETSNTDQEPIPIMTRKSSRPHHPPSYLKDFYCNLTSQNSTPFPLNQYLSYNAY 768

Query: 55  SSQYHKYVMSITAVLEP 5
           S  +  Y+ ++T++ EP
Sbjct: 769 SQHHKNYMFNVTSIYEP 785


>ref|XP_004174144.1| PREDICTED: uncharacterized protein LOC101232447 [Cucumis sativus]
          Length = 231

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -3

Query: 232 SPHLISSTHADTSILAPTQPAIRKSSREHHPPSYLKDYICN--SVHTLPHPLSSVLHYDR 59
           +PH+ +S     +  AP     RK SR HHP SYLKD+ CN  S ++ P PL+  L Y+ 
Sbjct: 110 NPHVNNSEETSNTDQAPIPIVTRKFSRPHHPSSYLKDFYCNLTSQNSTPFPLNQYLSYNA 169

Query: 58  LSSQYHKYVMSITAVLEP 5
            S  +  Y+ ++T++ EP
Sbjct: 170 YSQHHKNYMFNVTSIYEP 187


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
 Frame = -3

Query: 250 PSSNSTSPHLISSTHADTSILAPTQPAIRKSSREHHPPSYLKDYICNSV----HTLP--- 92
           PSSNS  P L+S   A      P +P +R+S R HHPP  L+DY+CN V    H  P   
Sbjct: 540 PSSNS-DPFLLSHHLASP----PPEPILRRSQRPHHPPMALRDYVCNQVTSPNHLPPLSS 594

Query: 91  -------HPLSSVLHYDRLSSQYHKYVMSITAVLEP 5
                  +PL + + Y R S Q+  +  +++  +EP
Sbjct: 595 SPQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEP 630


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
 Frame = -3

Query: 253  LPSSNSTSPHLISSTHADTSILAPTQPAIRKSSREHHPPSYLKDYICNSV----HTLP-- 92
            LP+S ST P     +HA      P +P +R+S R HHPP  L+DY+CN V    H  P  
Sbjct: 748  LPNSVSTQP-----SHASP----PPEPILRRSQRPHHPPMALRDYVCNQVTFPNHLPPLS 798

Query: 91   --------HPLSSVLHYDRLSSQYHKYVMSITAVLEP 5
                    +PL + + Y R S Q+  +  +++  +EP
Sbjct: 799  SSPQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEP 835


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
 Frame = -3

Query: 253  LPSSNSTSPHLISSTHADTSILAPTQPAIRKSSREHHPPSYLKDYICNSV----HTLP-- 92
            LP+S ST P   S          P +P +R+S R HHPP  L+DY+CN V    H LP  
Sbjct: 840  LPNSVSTQPSPASP---------PPEPILRRSQRPHHPPMALRDYVCNQVTSPNHLLPLS 890

Query: 91   --------HPLSSVLHYDRLSSQYHKYVMSITAVLEP 5
                    +PL + + Y   S Q+  +  +++  +EP
Sbjct: 891  SSPQKSTCYPLCNFVSYHHYSPQHRSFTTAVSQDIEP 927


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = -3

Query: 187  APTQPAIRKSSREHHPPSYLKDYICNSV-HTLPHPLSSVLHYDRLSSQYHKYVMSITAVL 11
            A   PA +++SR   PP+YLKDY CNSV  +  HP+S VL Y  LS  Y  ++ ++  + 
Sbjct: 854  ASNVPAEKQNSRVSRPPAYLKDYHCNSVTSSTDHPISEVLSYSSLSDPYMIFINAVNKIP 913

Query: 10   EP 5
            EP
Sbjct: 914  EP 915


Top