BLASTX nr result

ID: Rauwolfia21_contig00050725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050725
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532994.1| hypothetical protein RCOM_0233610 [Ricinus c...    64   2e-08
ref|XP_002309080.2| hypothetical protein POPTR_0006s09010g [Popu...    64   3e-08
ref|XP_002323517.1| fringe-related family protein [Populus trich...    57   3e-06

>ref|XP_002532994.1| hypothetical protein RCOM_0233610 [Ricinus communis]
           gi|223527223|gb|EEF29386.1| hypothetical protein
           RCOM_0233610 [Ricinus communis]
          Length = 146

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 PAETLQDPLKPWKYLLFSPFRVIHALTMFVKGXXXXXXXXXXXXVCYTFFSNNAKLFICS 124
           P +T+ DP K WK+L+F   R        VK             V  + FSN  +   C 
Sbjct: 4   PQDTIHDPFKAWKFLVFPIIRTSDIFFFLVKTVLLLCTLLSIFLVFSSAFSNQFQWLSCP 63

Query: 123 GCEQSYVRLTTNYQEIRASY--DDYEVTNLSHILFGISGSAKT 1
           GC++  + L  +++  R+++  D + VTN+SHILFGI GSAKT
Sbjct: 64  GCDR--ISLAGHHKLTRSNFSSDSHRVTNVSHILFGIGGSAKT 104


>ref|XP_002309080.2| hypothetical protein POPTR_0006s09010g [Populus trichocarpa]
           gi|550335825|gb|EEE92603.2| hypothetical protein
           POPTR_0006s09010g [Populus trichocarpa]
          Length = 505

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/101 (35%), Positives = 50/101 (49%)
 Frame = -1

Query: 303 PAETLQDPLKPWKYLLFSPFRVIHALTMFVKGXXXXXXXXXXXXVCYTFFSNNAKLFICS 124
           P  ++QDP K WK+L+    +V    ++F+K             V Y+F  N ++   C 
Sbjct: 4   PTPSIQDPFKAWKFLVLPTLKVSDVFSLFLKATIAICTFVSISLVFYSFL-NQSQWQPCP 62

Query: 123 GCEQSYVRLTTNYQEIRASYDDYEVTNLSHILFGISGSAKT 1
            C +S +           S D YE TN+SHILFGI GSAKT
Sbjct: 63  ECHKSLISDHRKITNGNVSGDFYEKTNISHILFGIGGSAKT 103


>ref|XP_002323517.1| fringe-related family protein [Populus trichocarpa]
           gi|224140295|ref|XP_002323518.1| predicted protein
           [Populus trichocarpa] gi|222868147|gb|EEF05278.1|
           fringe-related family protein [Populus trichocarpa]
          Length = 503

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 48/101 (47%)
 Frame = -1

Query: 303 PAETLQDPLKPWKYLLFSPFRVIHALTMFVKGXXXXXXXXXXXXVCYTFFSNNAKLFICS 124
           P+   QDP K WK+L+    +V    ++F+K             V Y+F + + +L  C 
Sbjct: 2   PSPIDQDPFKAWKFLVLPTLKVSDIFSLFLKATIAICTVVSISLVFYSFLNPSQRL-PCP 60

Query: 123 GCEQSYVRLTTNYQEIRASYDDYEVTNLSHILFGISGSAKT 1
            C +  V           S   YE TN+SHILFGI GSAKT
Sbjct: 61  ECNKILVSDHRKITNGEVSGYSYEKTNISHILFGIGGSAKT 101


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