BLASTX nr result
ID: Rauwolfia21_contig00050635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00050635
(385 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18822.1| hypothetical protein PRUPE_ppa015626mg, partial [... 70 3e-10
ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii] 58 1e-06
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
emb|CBI27235.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
gb|AFW81771.1| putative pentatricopeptide repeat family protein ... 57 3e-06
gb|AFW71819.1| putative pentatricopeptide repeat family protein ... 57 3e-06
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat... 56 4e-06
gb|AEU08453.1| pentatricopeptide repeat protein [Takakia lepidoz... 56 6e-06
ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [S... 56 6e-06
ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat... 55 1e-05
ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708... 55 1e-05
>gb|EMJ18822.1| hypothetical protein PRUPE_ppa015626mg, partial [Prunus persica]
Length = 690
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = -2
Query: 384 SGQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEG 214
SGQS ++ R ++HSFVA D+ HQ S+Q++ +L LE KMREEG+V D +F+ HD+ G
Sbjct: 623 SGQSVVEARGDIHSFVAGDRRHQDSDQIFGLLGTLEVKMREEGYVPDVDFQQHDMHG 679
>ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Oryza brachyantha]
Length = 637
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -2
Query: 375 SSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGD 211
S I+ VH F+ DKSH Q++++YA+L L KMREEG+V D EF HD+E +
Sbjct: 506 SWIEVGRRVHVFLVGDKSHPQADEIYALLKKLSVKMREEGYVADTEFVLHDVEDE 560
>gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii]
Length = 773
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/56 (42%), Positives = 41/56 (73%)
Frame = -2
Query: 384 SGQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLE 217
+G S IQ +++VHSF+A+DKSH+ S+Q+Y L + A++++EG+ + F HD+E
Sbjct: 555 AGSSWIQIKNKVHSFIASDKSHRLSDQIYTKLKAMTARLKQEGYCPNTSFVLHDME 610
>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGDTVL 202
G S I+FRDEVH F+A D SH QS Q++ L L KMR+EG+V D H+++ D
Sbjct: 763 GCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKE 822
Query: 201 NM 196
N+
Sbjct: 823 NL 824
>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGDTVL 202
G S I+FRDEVH F+A D SH QS Q++ L L KMR+EG+V D H+++ D
Sbjct: 563 GCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKE 622
Query: 201 NM 196
N+
Sbjct: 623 NL 624
>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/55 (43%), Positives = 42/55 (76%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLE 217
GQS ++ ++EVHSF+A+D+ H +S+Q+Y ML L+A+MREEG+ D + + +++
Sbjct: 648 GQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDARMREEGY--DPDLQTQEIQ 700
>gb|AFW81771.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 684
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -2
Query: 384 SGQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGD 211
+G S IQ +++VH F+A+DKSH S Q+YA L + AK+++EG+ D F HD+ D
Sbjct: 579 AGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRSMTAKLKQEGYCPDTSFVLHDVAED 636
>gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -2
Query: 384 SGQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGD 211
+G S IQ +++VH F+A+DKSH S Q+YA L + AK+++EG+ D F HD+ D
Sbjct: 696 AGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAED 753
>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Solanum tuberosum]
Length = 889
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGDTVL 202
G S I+F DEVH FVA D SH QS Q+Y L L KM++EG+V D H++ D
Sbjct: 756 GCSWIEFGDEVHKFVAGDASHPQSEQLYGYLETLSEKMKKEGYVPDTSCVLHNVNEDEKE 815
Query: 201 NM 196
N+
Sbjct: 816 NL 817
>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Solanum lycopersicum]
Length = 889
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGDTVL 202
G S I+F DEVH FVA D SH QS Q+Y L L KM++EG+V D H++ D
Sbjct: 756 GCSWIEFGDEVHKFVAGDASHPQSEQLYGYLETLSEKMKKEGYVPDTSCVLHNVNEDEKE 815
Query: 201 NM 196
N+
Sbjct: 816 NL 817
>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like isoform X1 [Glycine max]
gi|571454638|ref|XP_006579856.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g01580-like isoform X2 [Glycine max]
Length = 700
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/43 (51%), Positives = 36/43 (83%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGF 253
GQS ++ ++EVHSF+A+D+ H +S+Q+Y ML L+A+M+EEG+
Sbjct: 649 GQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDARMKEEGY 691
>gb|AEU08453.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGDT 208
G S I+ R VHSF+ +D+SH Q+ ++YA L L + M+EEG++ D F HD++ T
Sbjct: 26 GCSWIEVRKRVHSFIVDDRSHPQTEEIYAELEKLTSHMKEEGYIPDTRFILHDVDQQT 83
>ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein
SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -2
Query: 384 SGQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDL 220
+G S IQ +++VHSF+A+DKSH S Q+YA L + K+++EG+ D F H++
Sbjct: 744 AGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEV 798
>ref|XP_004308731.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Fragaria vesca subsp. vesca]
Length = 675
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = -2
Query: 381 GQSSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLE 217
G S+++ +D+VH+F+A D+SH QS ++Y L L KM+E G+V + + HD+E
Sbjct: 542 GVSNVELKDQVHTFLAGDRSHPQSKEIYEELDILVGKMKELGYVPETDSALHDVE 596
>ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708|gb|ACF86938.1| unknown
[Zea mays] gi|413956425|gb|AFW89074.1| hypothetical
protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = -2
Query: 375 SSIQFRDEVHSFVANDKSHQQSNQVYAMLMFLEAKMREEGFVLDQEFRAHDLEGD 211
S I+ VH F+ DKSH Q+ ++YA+L L KMREEG+V D F HD+E +
Sbjct: 504 SWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDE 558