BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050409
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485104.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_006485103.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_006341481.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006436947.1| hypothetical protein CICLE_v10033858mg, part...    69   8e-10
gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, put...    67   3e-09
ref|XP_004236435.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    65   7e-09
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
gb|EOX93534.1| Pentatricopeptide repeat (PPR) superfamily protei...    64   2e-08
gb|EPS65114.1| hypothetical protein M569_09664 [Genlisea aurea]        63   5e-08
ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002321748.2| pentatricopeptide repeat-containing family p...    60   2e-07
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    58   1e-06
ref|XP_006838107.1| hypothetical protein AMTR_s00106p00044940 [A...    55   1e-05

>ref|XP_006485104.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 960

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
 Frame = +1

Query: 28  RYLIKKSSHAYISLQSKLL------FHTSE----GNEATAEQITKILRHNSWKSILECSK 177
           R +  K+ H++I  ++K+       F TS+     NE  A++IT  L  N W+S++E SK
Sbjct: 2   RLITHKTRHSFIRTRTKISRLKSMQFSTSQTSLHSNEEAAKEITNFLNENHWESLIESSK 61

Query: 178 VSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADHQMG 291
           +  KLNPD+V SVLQ + +N  P+RL  FF+W   Q+G
Sbjct: 62  LRNKLNPDVVQSVLQHSHVN-DPKRLLGFFNWTSTQLG 98


>ref|XP_006485103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 1030

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
 Frame = +1

Query: 28  RYLIKKSSHAYISLQSKLL------FHTSE----GNEATAEQITKILRHNSWKSILECSK 177
           R +  K+ H++I  ++K+       F TS+     NE  A++IT  L  N W+S++E SK
Sbjct: 2   RLITHKTRHSFIRTRTKISRLKSMQFSTSQTSLHSNEEAAKEITNFLNENHWESLIESSK 61

Query: 178 VSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADHQMG 291
           +  KLNPD+V SVLQ + +N  P+RL  FF+W   Q+G
Sbjct: 62  LRNKLNPDVVQSVLQHSHVN-DPKRLLGFFNWTSTQLG 98


>ref|XP_006341481.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Solanum tuberosum]
          Length = 1035

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/94 (38%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
 Frame = +1

Query: 25  QRYLIKKS-----SHAYISLQSKLLFHTSEGNEATAEQITKILRHNSWKSILECSKVSQK 189
           +R++IKKS     S + +   S +L      +++TAE+I+ IL+  +WK +LE S++ +K
Sbjct: 18  RRHVIKKSMRYTHSKSTVEEISTILKDKISESKSTAEEISTILKLKNWKLLLESSEIPKK 77

Query: 190 LNPDLVHSVLQRNQMNIHPRRLFDFFSWADHQMG 291
           LN D+V SVL  N++ ++P+RL DFF W++ ++G
Sbjct: 78  LNADVVQSVLDWNKLLVNPKRLLDFFDWSNQKLG 111


>ref|XP_006436947.1| hypothetical protein CICLE_v10033858mg, partial [Citrus clementina]
           gi|557539143|gb|ESR50187.1| hypothetical protein
           CICLE_v10033858mg, partial [Citrus clementina]
          Length = 990

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = +1

Query: 85  FHTSE----GNEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRR 252
           F TS+     NE  A++IT  L  N W+S++E SK+  KLNPD+V SVLQ + +N  P+R
Sbjct: 3   FSTSQTSLHSNEEAAKEITNFLNENHWESLIESSKLRNKLNPDVVQSVLQHSHVN-DPKR 61

Query: 253 LFDFFSWADHQMG 291
           L  FF+W   Q+G
Sbjct: 62  LLGFFNWTSTQLG 74


>gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508775366|gb|EOY22622.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 1021

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +1

Query: 85  FHTSEGNEATAEQITKILRHNSWKSILE-CSKVSQKLNPDLVHSVLQRNQMNIHPRRLFD 261
           F TS  N+A AE+I  IL    WK +LE  S++  KLNP+ VHS+L ++ +   P+RLF+
Sbjct: 25  FCTSAENDAAAEEIAAILEKKDWKRLLETTSELKNKLNPETVHSILHQSSVR-DPKRLFN 83

Query: 262 FFSWADHQM 288
           FF+WA HQ+
Sbjct: 84  FFNWAIHQV 92


>ref|XP_004236435.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Solanum lycopersicum]
          Length = 1010

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/88 (39%), Positives = 56/88 (63%)
 Frame = +1

Query: 28  RYLIKKSSHAYISLQSKLLFHTSEGNEATAEQITKILRHNSWKSILECSKVSQKLNPDLV 207
           RY   KS+   IS   K     S+   +TAE+I+ IL+  +WK +LE S++ +KLN D+V
Sbjct: 2   RYSHSKSTPEEISTILKDKISVSK---STAEEISTILKLKNWKLLLESSEIPKKLNADVV 58

Query: 208 HSVLQRNQMNIHPRRLFDFFSWADHQMG 291
             VL  N++ ++P+RL DFF W++ ++G
Sbjct: 59  QFVLDGNKLLVNPKRLLDFFDWSNQKVG 86


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +1

Query: 85  FHTSEGNEAT---AEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRL 255
           F TS     T   ++QI+  L+ N+WK+I+  S +  KLNPD++ +VL +NQ+   P+RL
Sbjct: 31  FSTSTSTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVG-DPKRL 89

Query: 256 FDFFSWADHQMGFTQ 300
            DFF W+  QMG  Q
Sbjct: 90  LDFFYWSQSQMGVPQ 104


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +1

Query: 85  FHTSEGNEAT---AEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRL 255
           F TS     T   ++QI+  L+ N+WK+I+  S +  KLNPD++ +VL +NQ+   P+RL
Sbjct: 29  FSTSTPTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVG-DPKRL 87

Query: 256 FDFFSWADHQMGFTQ 300
            DFF W+  QMG  Q
Sbjct: 88  LDFFYWSQSQMGVPQ 102


>gb|EOX93534.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 867

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +1

Query: 70  QSKLLFHTSEGNEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPR 249
           QS+ L H     + T  QIT IL  N+W+ +++ S ++ KLNPD++ SV+ +N+    P 
Sbjct: 22  QSEPLIH-----QDTVTQITSILSRNNWQRLMDSSDIATKLNPDIIRSVIHQNRTASDPT 76

Query: 250 RLFDFFSWADHQMGFTQ 300
           RL  FF W+  ++G TQ
Sbjct: 77  RLLGFFIWSQRRVGTTQ 93


>gb|EPS65114.1| hypothetical protein M569_09664 [Genlisea aurea]
          Length = 1012

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/86 (34%), Positives = 54/86 (62%)
 Frame = +1

Query: 34  LIKKSSHAYISLQSKLLFHTSEGNEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHS 213
           +I ++   +IS+  +L  +    +EA   +I KIL+HN+W+ +L+ S +   LN ++V S
Sbjct: 16  MIGETGFMFISVSFRLYSNGVSVSEAA--EIGKILKHNNWEFMLDSSDIPLHLNSEVVDS 73

Query: 214 VLQRNQMNIHPRRLFDFFSWADHQMG 291
           VLQ    ++HP RL DF +W++ ++G
Sbjct: 74  VLQGTHSSVHPMRLLDFLNWSNQRLG 99


>ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Citrus sinensis]
          Length = 989

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = +1

Query: 106 EATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADHQ 285
           EAT  QIT IL  N W+ +L  S V +KLNPD++ SV+  N+ + +  RL  FF W++ Q
Sbjct: 34  EATVRQITSILTQNDWQRLLTSSNVPKKLNPDVIRSVIHLNRAH-NLTRLLSFFHWSERQ 92

Query: 286 MGFTQ 300
           MG  Q
Sbjct: 93  MGTCQ 97


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/63 (39%), Positives = 45/63 (71%)
 Frame = +1

Query: 103 NEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADH 282
           NE +  +IT +L  ++W++++E S + +KLN D++ SV+ +NQ+   P+RL +FF W+ H
Sbjct: 23  NEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVG-DPKRLLNFFYWSQH 81

Query: 283 QMG 291
           +MG
Sbjct: 82  KMG 84


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/63 (39%), Positives = 45/63 (71%)
 Frame = +1

Query: 103 NEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADH 282
           NE +  +IT +L  ++W++++E S + +KLN D++ SV+ +NQ+   P+RL +FF W+ H
Sbjct: 32  NEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVG-DPKRLLNFFYWSQH 90

Query: 283 QMG 291
           +MG
Sbjct: 91  KMG 93


>ref|XP_002321748.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322507|gb|EEF05875.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 1026

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = +1

Query: 94  SEGNEATAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSW 273
           ++ N     +IT  L   +W+S+L    VS KL+PD+VHSV+ + Q+N  P+RL DFF+W
Sbjct: 35  TQNNSNIVNEITTFLNQKNWESLLPL--VSNKLSPDVVHSVITK-QVN-DPKRLLDFFNW 90

Query: 274 ADHQMGFTQ 300
              QMGF+Q
Sbjct: 91  VQFQMGFSQ 99


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
 Frame = +1

Query: 64  SLQSKLLFHTSEGNEA--TAEQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMN 237
           S++S      ++ N++  T ++IT +L+  +W+ ++E S +  KLNPD+V  V+++NQ+ 
Sbjct: 26  SIKSNSFSTNADTNQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQV- 84

Query: 238 IHPRRLFDFFSWADHQMGFTQ 300
           I P+RL  FF+W + +  F+Q
Sbjct: 85  IDPKRLHGFFNWVNSRTVFSQ 105


>ref|XP_006838107.1| hypothetical protein AMTR_s00106p00044940 [Amborella trichopoda]
           gi|548840565|gb|ERN00676.1| hypothetical protein
           AMTR_s00106p00044940 [Amborella trichopoda]
          Length = 1042

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 42/61 (68%)
 Frame = +1

Query: 118 EQITKILRHNSWKSILECSKVSQKLNPDLVHSVLQRNQMNIHPRRLFDFFSWADHQMGFT 297
           E++  +L  ++W+ +++ S +  KL P+L+H  L +NQ+   P+RL +FF+W++ QMG +
Sbjct: 45  EKLCNLLEDHNWEFLIDSSDLRHKLKPNLIHKTLLQNQVT-DPKRLLNFFNWSEKQMGAS 103

Query: 298 Q 300
           Q
Sbjct: 104 Q 104