BLASTX nr result
ID: Rauwolfia21_contig00050153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00050153
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
gb|EXC21407.1| hypothetical protein L484_011849 [Morus notabilis] 83 3e-14
ref|XP_006491968.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,... 78 1e-12
ref|XP_006596915.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_002317794.2| hypothetical protein POPTR_0012s02580g [Popu... 74 2e-11
gb|EOY23620.1| Tetratricopeptide repeat-like superfamily protein... 72 6e-11
gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus... 71 1e-10
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,... 71 2e-10
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ... 69 8e-10
ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
emb|CBI16054.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|ESW13295.1| hypothetical protein PHAVU_008G184300g [Phaseolus... 67 2e-09
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,... 66 5e-09
gb|EOY01787.1| Pentatricopeptide repeat-containing protein, puta... 65 1e-08
ref|XP_002312273.1| pentatricopeptide repeat-containing family p... 65 1e-08
>ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum tuberosum]
Length = 851
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKN 174
VH A+KNGFH HEFV+TKLLQMYG+CGCF DA ++F+ M RNLYSWTAIL+ Y+ N
Sbjct: 83 VHAQALKNGFHGHEFVETKLLQMYGKCGCFDDAVQLFDKMRERNLYSWTAILNVYLSN 140
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNSH 180
VH H +K GFH HEFV+TKLLQMYGR GC DA +F MP RNLYSWTAIL ++ + +
Sbjct: 81 VHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGY 140
Query: 181 Y 183
+
Sbjct: 141 F 141
>gb|EXC21407.1| hypothetical protein L484_011849 [Morus notabilis]
Length = 841
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYI 168
VH H +K GF HEFV+TKLLQMY +CG DAA +FE MP+RNLY+WTAIL Y+
Sbjct: 66 VHAHTVKTGFCGHEFVETKLLQMYAKCGRLEDAALVFEKMPLRNLYAWTAILSVYV 121
>ref|XP_006491968.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
Length = 817
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNSH 180
VH H+IK GF HEFV+TKLLQMYGR GC DA+ +F+ MP RNLYS+TAIL Y+
Sbjct: 40 VHAHSIKTGFRGHEFVETKLLQMYGRYGCLEDASLIFDKMPRRNLYSYTAILSLYMDLGF 99
Query: 181 Y 183
Y
Sbjct: 100 Y 100
>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 758
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTY 165
VH HAIK GFH H+FVQTKLLQMY + GC A +F+ +P+RNL+SW AIL+ Y
Sbjct: 86 VHAHAIKTGFHCHDFVQTKLLQMYAKFGCLECAHLLFDSVPLRNLHSWLAILNVY 140
>ref|XP_006596915.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like, partial [Glycine max]
Length = 764
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIK 171
+H H+IK+GF+ HEFV TKLLQMY R F +A +F+ MP+RNL+SWTA+L YI+
Sbjct: 70 LHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYIE 126
>ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 845
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIK 171
+H H+IK+GF+ HEFV TKLLQMY R F +A +F+ MP+RNL+SWTA+L YI+
Sbjct: 70 LHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYIE 126
>ref|XP_002317794.2| hypothetical protein POPTR_0012s02580g [Populus trichocarpa]
gi|550326228|gb|EEE96014.2| hypothetical protein
POPTR_0012s02580g [Populus trichocarpa]
Length = 807
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYI 168
VH H IK GF F+ TKLLQMY RCG DA +FE MP+RNL+SW AIL Y+
Sbjct: 81 VHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYL 136
>gb|EOY23620.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 831
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYI 168
VH H +K GF HEFV TKLLQMY + G DA +F+ M +RNLYSWTA+L Y+
Sbjct: 62 VHAHTLKTGFFAHEFVDTKLLQMYAKFGSLEDADLLFDKMALRNLYSWTAMLRLYV 117
>gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus vulgaris]
Length = 810
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIK 171
+H H+IK+GF HEFV TKLLQMY R F +A +F+ MP RNL+SW A+L +++
Sbjct: 68 LHAHSIKSGFQAHEFVTTKLLQMYARLCSFQNACHLFDTMPFRNLHSWAALLRVHVE 124
>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNS 177
+HG IK GF H FVQT L+ MYG C DA ++FEIMPV++L +W ++LD Y N+
Sbjct: 72 LHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDAFKVFEIMPVKDLIAWNSMLDAYASNA 130
>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYI 168
+H H+IK GF+ H FVQTKLLQMY F DA MF+ M ++NL+SWTA+L ++
Sbjct: 53 LHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHL 108
>ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 67.8 bits (164), Expect = 1e-09
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNSH 180
+HGH +K GFH FV T L+ +Y +CG A ++F+ +P RN+ +WT +L Y++NSH
Sbjct: 86 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 145
>ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 67.8 bits (164), Expect = 1e-09
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNSH 180
+HGH +K GFH FV T L+ +Y +CG A ++F+ +P RN+ +WT +L Y++NSH
Sbjct: 80 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 139
>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKN 174
+HGH +++GF H + T LL MY R GC +A+R+F+ MPV+N+ SW+A++ Y KN
Sbjct: 205 IHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKN 262
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKN 174
+HGH +++GF H + T LL MY R GC +A+R+F+ MPV+N+ SW+A++ Y KN
Sbjct: 205 IHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKN 262
>gb|ESW13295.1| hypothetical protein PHAVU_008G184300g [Phaseolus vulgaris]
Length = 754
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKNS 177
VHGHA+K GFH +V + LL +Y +CG DA ++F+ MP RN+ +WT ++ Y +NS
Sbjct: 86 VHGHALKTGFHEDVYVMSVLLNVYAKCGNMDDARKVFDNMPRRNVVAWTMLISGYAQNS 144
>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 628
Score = 65.9 bits (159), Expect = 5e-09
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKN 174
+H IK F F+Q +L+ YG+CGCF DA ++F+ MP +N++SW AI+ T +K+
Sbjct: 41 IHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKS 98
>gb|EOY01787.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 830
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYIKN 174
VHG IKNG +QT LL MYG GC S A ++F+ MP+R+L SW++I+ +Y++N
Sbjct: 123 VHGTIIKNGLDEDSVIQTSLLCMYGEMGCLSYAKKVFDEMPIRDLVSWSSIILSYVEN 180
>ref|XP_002312273.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852093|gb|EEE89640.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 745
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1
Query: 1 VHGHAIKNGFHRHEFVQTKLLQMYGRCGCFSDAARMFEIMPVRNLYSWTAILDTYI 168
VHG IK GF F++T LL +YG GC +DA ++F+ +PVR+L SW++I+ +Y+
Sbjct: 121 VHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYV 176