BLASTX nr result

ID: Rauwolfia21_contig00050017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00050017
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY30570.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,...    55   1e-05
gb|AGL40443.1| C3H-type zinc finger protein [Glycine max]              55   1e-05
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...    55   1e-05

>gb|EOY30570.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative
           [Theobroma cacao]
          Length = 404

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -3

Query: 115 MVRPGFYSLPSTPTRAVA*PGIG*FDAWDKGGCEEEPV 2
           ++RPGF SLPSTPTR +  PGIG  D WD  GCEEEPV
Sbjct: 292 VIRPGFCSLPSTPTRNLTRPGIGYLDFWD-NGCEEEPV 328


>gb|AGL40443.1| C3H-type zinc finger protein [Glycine max]
          Length = 353

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -3

Query: 115 MVRPGFYSLPSTPTRAVA*PGIG*FDAWDKGGCEEEPV 2
           M+RPGF+SLP+TPT+A    G+  FD WD+  CEEEPV
Sbjct: 268 MIRPGFFSLPTTPTQAPTRGGVNYFDQWDQSCCEEEPV 305


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -3

Query: 115 MVRPGFYSLPSTPTRAVA*PGIG*FDAWDKGGCEEEPV 2
           M+RPGF+SLP+TPT+A    G+  FD WD+  CEEEPV
Sbjct: 268 MIRPGFFSLPTTPTQAPTRGGVNYFDQWDQSCCEEEPV 305


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