BLASTX nr result

ID: Rauwolfia21_contig00049221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00049221
         (795 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338214.1| predicted protein [Populus trichocarpa]            56   4e-10
ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomen...    67   7e-09
gb|EXB75017.1| hypothetical protein L484_012141 [Morus notabilis]      65   4e-08
gb|EXB37177.1| hypothetical protein L484_013541 [Morus notabilis]      65   4e-08
ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus tr...    62   2e-07
ref|XP_002319333.1| predicted protein [Populus trichocarpa]            60   7e-07
ref|NP_054982.1| hypothetical protein SpolCp149 [Spinacia olerac...    58   4e-06

>ref|XP_002338214.1| predicted protein [Populus trichocarpa]
          Length = 81

 Score = 55.8 bits (133), Expect(2) = 4e-10
 Identities = 30/41 (73%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = +3

Query: 675 GAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           G+ LKKDLRVS+VG GGSLN  FFLLIGV+S+R A VRK+G
Sbjct: 12  GSRLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKG 52



 Score = 35.4 bits (80), Expect(2) = 4e-10
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 641 MCLFIYLLTRNGSRFEK 691
           MCLFIYLLTRNGSR +K
Sbjct: 1   MCLFIYLLTRNGSRLKK 17


>ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomentosiformis]
           gi|81301638|ref|YP_398933.1| hypothetical protein
           NitoCp122 [Nicotiana tomentosiformis]
           gi|351653934|ref|YP_004891660.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|351653949|ref|YP_004891676.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|76559646|emb|CAJ32484.1| hypothetical protein
           [Nicotiana tabacum] gi|76559648|emb|CAJ32486.1|
           hypothetical protein [Nicotiana tabacum]
           gi|77799619|dbj|BAE46708.1| hypothetical protein
           [Nicotiana sylvestris] gi|77799635|dbj|BAE46724.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|80750981|dbj|BAE48057.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|80750997|dbj|BAE48073.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|347453960|gb|AEO95618.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453975|gb|AEO95633.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454070|gb|AEO95727.1| hypothetical protein
           [synthetic construct] gi|347454085|gb|AEO95742.1|
           hypothetical protein [synthetic construct]
          Length = 71

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 36/42 (85%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           MGAGLKKDLRVSRVG GGSLN  FFLLIGV+SQR ARVRK+G
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKG 42


>gb|EXB75017.1| hypothetical protein L484_012141 [Morus notabilis]
          Length = 62

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 35/42 (83%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           MGAGLKKDLRVSRVG GGSLN  FFLLIGV+SQR A VRK+G
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKG 42


>gb|EXB37177.1| hypothetical protein L484_013541 [Morus notabilis]
          Length = 71

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 35/42 (83%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           MGAGLKKDLRVSRVG GGSLN  FFLLIGV+SQR A VRK+G
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKG 42


>ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus trichocarpa]
           gi|134093266|ref|YP_001109567.1| hypothetical protein
           Poptr_cp089 [Populus trichocarpa]
           gi|133712113|gb|ABO36756.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712128|gb|ABO36771.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 71

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/42 (78%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           MGAGLKKDLRVS+VG GGSLN  FFLLIGV+S+R A VRK+G
Sbjct: 1   MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKG 42


>ref|XP_002319333.1| predicted protein [Populus trichocarpa]
          Length = 71

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARVRKRG 794
           MGAGLKKDLRVS+VG GGSLN  FFLLIGV+S+R   VRK+G
Sbjct: 1   MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLVMVRKKG 42


>ref|NP_054982.1| hypothetical protein SpolCp149 [Spinacia oleracea]
           gi|11497590|ref|NP_054997.1| hypothetical protein
           SpolCp150 [Spinacia oleracea] gi|7636156|emb|CAB88778.1|
           hypothetical protein [Spinacia oleracea]
           gi|7636171|emb|CAB88793.1| hypothetical protein
           [Spinacia oleracea]
          Length = 72

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 32/38 (84%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +3

Query: 672 MGAGLKKDLRVSRVGLGGSLNT-FFLLIGVLSQRPARV 782
           MGAGLKKDLRVSRVG GGSLN  FFLLIGV+SQR A V
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMV 38


Top