BLASTX nr result

ID: Rauwolfia21_contig00047559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00047559
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323971.1| hypothetical protein POPTR_0017s07770g [Popu...    55   7e-06

>ref|XP_002323971.1| hypothetical protein POPTR_0017s07770g [Populus trichocarpa]
           gi|118485902|gb|ABK94797.1| unknown [Populus
           trichocarpa] gi|222866973|gb|EEF04104.1| hypothetical
           protein POPTR_0017s07770g [Populus trichocarpa]
          Length = 401

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/78 (44%), Positives = 38/78 (48%)
 Frame = -2

Query: 236 IPGTVLSASLLVGLTTSLILFCSHFHQVIFSLSYQTCHKIPHINTHYMKLHSVYFIR*IQ 57
           + GT+LSASLLVG TT+LILFCSHFH                                  
Sbjct: 265 LTGTILSASLLVGFTTTLILFCSHFH---------------------------------- 290

Query: 56  *NVQVEEDKAVGKVSPLV 3
              QVEEDKAVGK SPLV
Sbjct: 291 ---QVEEDKAVGKFSPLV 305


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