BLASTX nr result
ID: Rauwolfia21_contig00047514
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00047514
(224 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 85 1e-14
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 84 3e-14
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 84 3e-14
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 80 3e-13
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 79 6e-13
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 78 1e-12
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 78 1e-12
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 77 3e-12
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 76 4e-12
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 76 5e-12
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 75 7e-12
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 74 2e-11
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 73 5e-11
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 72 6e-11
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar... 72 8e-11
gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana] 72 8e-11
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 71 2e-10
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe... 71 2e-10
ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu... 71 2e-10
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P+RT LS+ LVALL YGGVP FLDLL++ ++ET+ +++NKR A K A
Sbjct: 500 NSLEVVTTSNPPKRTKLSRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAA 559
Query: 183 IINGGVDDDNTA 218
+ +G +DD N A
Sbjct: 560 LNHGDMDDQNAA 571
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN+PR+TYLS+ L+ALL YGGVP FLD+L +AL + V+SNKR A KV+
Sbjct: 520 NSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVS 579
Query: 183 IINGGVDDDNTAAR 224
GG+D D T+AR
Sbjct: 580 FNYGGMDYDFTSAR 593
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN+PR+TYLS+ L+ALL YGGVP FLD+L +AL + V+SNKR A KV+
Sbjct: 522 NSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVS 581
Query: 183 IINGGVDDDNTAAR 224
GG+D D T+AR
Sbjct: 582 FNYGGMDYDFTSAR 595
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P+RT+LS+ L+ALL YGGVPR F+++L+ AL++ + V+S+KR A +V+
Sbjct: 567 NSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVS 626
Query: 183 IINGGVDD 206
I NG +DD
Sbjct: 627 INNGEMDD 634
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
N+LE+V SN PRRT LSK LVALL YGG+P FLD+L++ L+E++ ++ NK A VA
Sbjct: 492 NALEVVTTSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVA 551
Query: 183 IINGGVDDDNTA 218
+ G +DD N A
Sbjct: 552 LNYGEMDDQNAA 563
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SNKP+R YLSK+L+ALL +GGVP F+DLL S +++ VYSNKR A + +
Sbjct: 496 NSLEVVTTSNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRAS 555
Query: 183 IINGGVDDDNTA 218
I G D+ N A
Sbjct: 556 INCGEKDEYNAA 567
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
N+LE+V SN P+RT LSK LVALL YGG+P FLD+L++ L+E++ ++ NKR A A
Sbjct: 488 NALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAA 547
Query: 183 IINGGVDDDNTA 218
+ G +DD N A
Sbjct: 548 LNYGEMDDQNAA 559
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P RT LS+ LVALL YGGVP + FLD+L + L+ ++ ++ NKR A K A
Sbjct: 482 NSLEVVNTSNPPNRTKLSRNLVALLSYGGVPNDFFLDILRNTLENSKTIFQNKRSALKAA 541
Query: 183 IINGGVDDDNTA 218
+ G +DD N A
Sbjct: 542 LNYGDMDDQNAA 553
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
+SLEIVA+S++P + YLSK L++LL YGGV + F++LL SAL+ET+ VY KR A KV
Sbjct: 523 DSLEIVAISHRPNKAYLSKNLISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVV 582
Query: 183 IINGGVDDDNTAAR 224
I +DDD AR
Sbjct: 583 INYREMDDDCLTAR 596
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
+SLEIVA+S++P + YLSK L++LL YGGV + F++LL SAL+ET+ VY KR A KVA
Sbjct: 521 DSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVA 580
Query: 183 IINGGVDDDNTAAR 224
I +DD+ AR
Sbjct: 581 INYREMDDECLTAR 594
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLEIV S KP RTYLSK L+ALL YGGVP F LL S L+E V+SNKR A + +
Sbjct: 482 NSLEIVNTSIKPNRTYLSKNLIALLSYGGVPNEFFKSLLESNLEEANHVFSNKRVALRAS 541
Query: 183 IINGGVDDDNTA 218
+ +G +D+ N A
Sbjct: 542 VNHGNMDEYNAA 553
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NS+EI SN+PRR+YLSKYL+ALL YGGVP F++LL AL++ V S+KR A +V+
Sbjct: 439 NSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVS 498
Query: 183 IINGGVDD 206
+ G +DD
Sbjct: 499 LRFGEMDD 506
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NS+EI SN+PRR+YLSKYL+ALL YGGVP F++LL AL++ V S+KR A +V+
Sbjct: 453 NSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVS 512
Query: 183 IINGGVDD 206
+ G +DD
Sbjct: 513 LRFGEMDD 520
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P+ T LS+ L+ALL YGGVP + FL++L L+E++ ++ ++R A K A
Sbjct: 505 NSLEVVNTSNPPKMTRLSRNLIALLSYGGVPNDFFLNILRKTLEESKTIFYSERAAIKAA 564
Query: 183 IINGGVDDDNTA 218
I G +DD NTA
Sbjct: 565 INYGDMDDQNTA 576
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NS+E+V S+KP R YLSKYL+ALL YG VP F+D+L S L++ +Y+NKR A + +
Sbjct: 506 NSMEVVNTSHKPNRAYLSKYLIALLSYGRVPNEFFMDVLKSNLEDAGHIYTNKRAALRAS 565
Query: 183 IINGGVDDDNTA 218
+ +DD N A
Sbjct: 566 LNYAEMDDFNAA 577
>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 4;
Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
polymerase family protein [Arabidopsis thaliana]
Length = 927
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P+R LSK LVALL YGGVP + FLD+L++ L++ + ++ R A K A
Sbjct: 492 NSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAA 551
Query: 183 IINGGVDDDN 212
+ G +DD N
Sbjct: 552 LHYGNMDDKN 561
>gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]
Length = 905
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLE+V SN P+R LSK LVALL YGGVP + FLD+L++ L++ + ++ R A K A
Sbjct: 497 NSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAA 556
Query: 183 IINGGVDDDN 212
+ G +DD N
Sbjct: 557 LHYGNMDDKN 566
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLEIV S +P++T+LSK L+ALL YGGVP F+ +L +AL++ + SNK+ A +VA
Sbjct: 386 NSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVA 445
Query: 183 IINGGVDDDNTA 218
+ G +DD+ A
Sbjct: 446 LNYGDMDDNIVA 457
>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLEIV VS R T+ S++L+ALL +GGVP+ F +LL+ L++T V+ ++R A KVA
Sbjct: 306 NSLEIVTVSKSHRNTFFSRHLIALLCHGGVPKEYFRELLMKDLEDTRGVFCSRRAAFKVA 365
Query: 183 IINGGVDDDNTAAR 224
+G +DDD + +
Sbjct: 366 YNHGEIDDDYNSVK 379
>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
Length = 406
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3
Query: 3 NSLEIVAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRPAHKVA 182
NSLEIV S +P++T+LSK L+ALL YGGVP F+ +L +AL++ + SNK+ A +VA
Sbjct: 190 NSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVA 249
Query: 183 IINGGVDDDNTA 218
+ G +DD+ A
Sbjct: 250 LNYGDMDDNIVA 261