BLASTX nr result

ID: Rauwolfia21_contig00046232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00046232
         (226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   111   1e-22
ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306...    92   6e-17
ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [A...    52   6e-09

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   PTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFT 152
           PTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFT
Sbjct: 225 PTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFT 274


>ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306133 [Fragaria vesca
           subsp. vesca]
          Length = 155

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/67 (71%), Positives = 51/67 (76%)
 Frame = -2

Query: 210 WDKAFPLQGPCAVNPLRAVS*SSPREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFF 31
           W     LQG      L +++   PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIF 
Sbjct: 21  WGLMIGLQGQLT-GLLGSLTGLCPREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFC 79

Query: 30  LLGGYSE 10
           LLGGYSE
Sbjct: 80  LLGGYSE 86


>ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [Amborella trichopoda]
           gi|548854709|gb|ERN12619.1| hypothetical protein
           AMTR_s00025p00230340 [Amborella trichopoda]
          Length = 297

 Score = 51.6 bits (122), Expect(2) = 6e-09
 Identities = 26/45 (57%), Positives = 28/45 (62%)
 Frame = +1

Query: 19  PSQKEKDVSVRFGSS*LGWAGSTRNAMLTHKTTPLPESFAGTTLR 153
           P QK   +      S L WAG T NAMLTH+T PLPESF GT LR
Sbjct: 228 PMQKHTTLHSSTKRSILDWAGLTENAMLTHETIPLPESFVGTPLR 272



 Score = 34.3 bits (77), Expect(2) = 6e-09
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3

Query: 159 PVGGLLHKAPAEEKLYPSE 215
           PVG  LHKA AEEKLYP E
Sbjct: 279 PVGTFLHKASAEEKLYPDE 297


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