BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00046141
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...    70   2e-10
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]        70   3e-10
ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57...    70   3e-10
gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]        69   5e-10
gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus] ...    69   5e-10
gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosa...    69   5e-10
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...    69   5e-10
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]          69   5e-10
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu...    69   6e-10
sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Inclu...    69   6e-10
gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42147.1| reverse transcriptase [Cauliflower mosaic virus] ...    69   6e-10
gb|AGT42140.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42112.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42105.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42098.1| reverse transcriptase [Cauliflower mosaic virus] ...    69   6e-10
gb|AGT42091.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]        69   6e-10
gb|AGT42070.1| reverse transcriptase [Cauliflower mosaic virus] ...    69   6e-10
gb|AGT42063.1| reverse transcriptase [Cauliflower mosaic virus] ...    69   6e-10

>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
           gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
           unnamed protein product [Carnation etched ring virus]
           gi|225356|prf||1301227E ORF 5
          Length = 659

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   +     E +CRYASGSF   +  YH NEKELLAVI+  +KF  +L   RFL
Sbjct: 543 GILKAIHNSH-----EYICRYASGSFKAAERNYHSNEKELLAVIRVIKKFSIYLTPSRFL 597

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DN     F+  NL    +  RL+RW+
Sbjct: 598 IRTDNKNFTHFVNINLKGDRKQGRLVRWQ 626


>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +    D    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKINEDTNT-ELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57790326|gb|AAW56089.1|
           polyprotein [Horseradish latent virus]
          Length = 679

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKG-ESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRF 98
           G+LK +  +    +  E +CRYASGSF   +  YH N+KE LAVI++ QKF  +L   RF
Sbjct: 559 GILKAIHIDLSTNESIELVCRYASGSFKPAEQNYHSNDKETLAVIRTIQKFSIYLTPVRF 618

Query: 97  LLWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           L+  DNT  K F+  N     +  R IRW+
Sbjct: 619 LVRTDNTHFKYFLNINYKGDSKMGRNIRWQ 648


>gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +     I   E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKINEGINT-ELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722419|gb|AGT42084.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 675

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 554 GMLKAIQI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 612

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 613 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 641


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
           banding virus]
          Length = 708

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -3

Query: 229 ESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFLLWIDNT*VKSFIKNN 50
           E +CRYASG+F   +  YH NEKE+L++IK+ + F  ++L  +FL+  DNT    F++ N
Sbjct: 603 EVICRYASGTFKPAEKNYHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTN 662

Query: 49  LPSRPEYKRLIRWK 8
           +    +  RL+RW+
Sbjct: 663 IAGDYKQSRLVRWQ 676


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -3

Query: 229 ESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFLLWIDNT*VKSFIKNN 50
           E +CRYASG+F   +  YH NEKE+L++IK+ + F  ++L  +FL+  DNT    F++ N
Sbjct: 594 EVICRYASGTFKPAEKNYHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTN 653

Query: 49  LPSRPEYKRLIRWK 8
           +    +  RL+RW+
Sbjct: 654 IAGDYKQSRLVRWQ 667


>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|293185|gb|AAA62375.1| reverse
           transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 559 GMLKAIKI-NEGTNTELICRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFL 617

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 618 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 646


>sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 674

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 554 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 612

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 613 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 641


>gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42147.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722499|gb|AGT42154.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42140.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42112.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42105.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42098.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722467|gb|AGT42126.1| reverse transcriptase
           [Cauliflower mosaic virus] gi|530722475|gb|AGT42133.1|
           reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42091.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGANTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42070.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722547|gb|AGT42196.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642


>gb|AGT42063.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722459|gb|AGT42119.1| reverse transcriptase
           [Cauliflower mosaic virus] gi|530722507|gb|AGT42161.1|
           reverse transcriptase [Cauliflower mosaic virus]
           gi|530722515|gb|AGT42168.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 675

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = -3

Query: 274 GVLKKLDYENDIKKGESLCRYASGSFTDTQTRYHINEKELLAVIKSCQKFYYFLLQKRFL 95
           G+LK +   N+    E +CRYASGSF   +  YH N+KE LAVI + +KF  +L    FL
Sbjct: 555 GMLKAIKI-NEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFL 613

Query: 94  LWIDNT*VKSFIKNNLPSRPEYKRLIRWK 8
           +  DNT  KSF+  N     +  R IRW+
Sbjct: 614 IRTDNTHFKSFVNLNYKGDSKLGRNIRWQ 642