BLASTX nr result
ID: Rauwolfia21_contig00046132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00046132
(481 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC10656.1| hypothetical protein L484_025237 [Morus notabilis] 218 9e-55
ref|XP_006372552.1| hypothetical protein POPTR_0017s02730g [Popu... 214 7e-54
ref|XP_002302937.1| predicted protein [Populus trichocarpa] 214 7e-54
emb|CBI16128.3| unnamed protein product [Vitis vinifera] 210 1e-52
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera] 210 1e-52
gb|EOY34026.1| Pentatricopeptide repeat (PPR-like) superfamily p... 209 4e-52
ref|XP_006488331.1| PREDICTED: pentatricopeptide repeat-containi... 208 7e-52
ref|XP_006358860.1| PREDICTED: pentatricopeptide repeat-containi... 208 7e-52
ref|XP_002532847.1| pentatricopeptide repeat-containing protein,... 204 1e-50
ref|NP_192906.1| pentatricopeptide repeat-containing protein [Ar... 202 3e-50
ref|XP_004489566.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-50
ref|XP_004294524.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-50
ref|XP_006396864.1| hypothetical protein EUTSA_v10028537mg [Eutr... 201 1e-49
ref|XP_002887091.1| pentatricopeptide repeat-containing protein ... 201 1e-49
ref|XP_002872610.1| pentatricopeptide repeat-containing protein ... 199 4e-49
ref|XP_002872617.1| pentatricopeptide repeat-containing protein ... 197 1e-48
ref|XP_003528529.2| PREDICTED: pentatricopeptide repeat-containi... 196 3e-48
ref|XP_006287393.1| hypothetical protein CARUB_v10000599mg [Caps... 194 1e-47
ref|XP_006581214.1| PREDICTED: pentatricopeptide repeat-containi... 193 2e-47
ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containi... 193 2e-47
>gb|EXC10656.1| hypothetical protein L484_025237 [Morus notabilis]
Length = 567
Score = 218 bits (554), Expect = 9e-55
Identities = 96/160 (60%), Positives = 129/160 (80%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+LS L+ N+++KA FNE +++ LD YSFGIMIKGCC+ G+L++ F FL E
Sbjct: 134 FNNLLSFLLKSNHFEKAWWVFNEFKDRTELDEYSFGIMIKGCCEAGDLDRGFRFLDDLEK 193
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+GW PNVV+YT+LIDGCCK GD ++AK+LFYKMGE+GL AN YTYTVLI+G FR+GL+ D
Sbjct: 194 MGWSPNVVMYTSLIDGCCKNGDIERAKRLFYKMGEIGLVANHYTYTVLIHGFFRKGLKKD 253
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
G EL+EKMKR+G ++TY+ +I+E+C+DGK+S AFE+F
Sbjct: 254 GLELFEKMKREGILLSTYTYNCLINEFCNDGKLSSAFEVF 293
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
FN ++ N +KA S F E++ +F ++IKG +L + + E
Sbjct: 343 FNTLIDGFCNVGNMEKALSLFEELKSNGHSPSSATFNVLIKGFATAKDLARIVGLVGEME 402
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P V YT LID ++ D +KA +LF M + GL A+ Y Y VLI+G +G
Sbjct: 403 ERGISPCKVTYTILIDAFIQLDDMEKATKLFSSMEKSGLVADVYAYGVLIHGFCSKGNMK 462
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
+ +L++ M P Y+ +I+ YC +G +A
Sbjct: 463 EALKLFKSMSEKRLEPTDVIYNMLINGYCKEGNSYRA 499
Score = 75.1 bits (183), Expect = 9e-12
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N +++ A F+EM ++ + +V ++ I+I G C+ + +A + + +
Sbjct: 273 YNCLINEFCNDGKLSSAFEVFDEMHQRGVACNVITYSILICGLCREQRVGEAEKLMHRMK 332
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYK--------------------------- 277
+ G P+++ + TLIDG C VG+ +KA LF +
Sbjct: 333 SDGLCPSLITFNTLIDGFCNVGNMEKALSLFEELKSNGHSPSSATFNVLIKGFATAKDLA 392
Query: 278 --------MGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
M E G++ + TYT+LI+ + +L+ M++ G D + Y +I
Sbjct: 393 RIVGLVGEMEERGISPCKVTYTILIDAFIQLDDMEKATKLFSSMEKSGLVADVYAYGVLI 452
Query: 434 HEYCSDGKVSKAFELF 481
H +CS G + +A +LF
Sbjct: 453 HGFCSKGNMKEALKLF 468
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/125 (30%), Positives = 65/125 (52%)
Frame = +2
Query: 74 REKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTD 253
RE I+L Y++ +I C +G+L+ AFE G NV+ Y+ LI G C+
Sbjct: 263 REGILLSTYTYNCLINEFCNDGKLSSAFEVFDEMHQRGVACNVITYSILICGLCREQRVG 322
Query: 254 KAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
+A++L ++M GL + T+ LI+G G L+E++K +G P S T++ +I
Sbjct: 323 EAEKLMHRMKSDGLCPSLITFNTLIDGFCNVGNMEKALSLFEELKSNGHSPSSATFNVLI 382
Query: 434 HEYCS 448
+ +
Sbjct: 383 KGFAT 387
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDV-YSFGIMIKGCCKNGELNKAFEFLAHFE 178
FN ++ + + EM E+ + ++ I+I + ++ KA + + E
Sbjct: 378 FNVLIKGFATAKDLARIVGLVGEMEERGISPCKVTYTILIDAFIQLDDMEKATKLFSSME 437
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G +V Y LI G C G+ +A +LF M E L Y +LING + G
Sbjct: 438 KSGLVADVYAYGVLIHGFCSKGNMKEALKLFKSMSEKRLEPTDVIYNMLINGYCKEGNSY 497
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
++M+ G FP+ +Y+ I C D K +A
Sbjct: 498 RALGFVKEMREKGMFPNIASYNWTIRLLCIDEKWREA 534
>ref|XP_006372552.1| hypothetical protein POPTR_0017s02730g [Populus trichocarpa]
gi|550319181|gb|ERP50349.1| hypothetical protein
POPTR_0017s02730g [Populus trichocarpa]
Length = 564
Score = 214 bits (546), Expect = 7e-54
Identities = 94/160 (58%), Positives = 131/160 (81%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN++L L+ N ++KA FFNE++E++ DVYSFGIMIKGCC+NG L+K+F+ L ++
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQD 190
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G PNVVIYTTLIDGCCK GD ++A+ F KMGE+GL ANQYT+TVLINGLF++GL+ D
Sbjct: 191 MGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF+L+EKMK +G FP+ +TY+ +++EYC +GK+ +AF+LF
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLF 290
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
+A F+EMRE+ + +V ++ +I G C+ + +A + + + PN++ Y TLI
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
G C VG+ DKA L ++ GL+ + TY +LI G + G +L +M+ G
Sbjct: 345 SGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P T + +I Y ++ KAF+++
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIY 430
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++S N DKA S ++++ + + ++ I+I+G K G + E
Sbjct: 340 YNTLISGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+ V T LID ++ + +KA Q++ M + GL + Y Y VLI+GL +G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
+ +L+ M P Y+++IH YC + +A L
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/120 (30%), Positives = 60/120 (50%)
Frame = +2
Query: 110 IMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGEL 289
++I + E+ KAF+ + E G P+V +Y LI G C G+ ++ +LF MGE+
Sbjct: 412 VLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM 471
Query: 290 GLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
+ + Y +I+G + L +M+ G P+ +YSS+I C DGK +A
Sbjct: 472 HVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/121 (28%), Positives = 60/121 (49%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++Y++ ++ C G++ +AF+ G NVV Y TLI G C+ +A++L
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M + ++ N TY LI+G G + L +++K +G P TY+ +I Y
Sbjct: 326 DQMKKAAVSPNLITYNTLISGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 452 G 454
G
Sbjct: 386 G 386
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +2
Query: 44 DKACSFFNEMRE-KIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
+KA ++ M + +V DVY +G++I G C G + ++ + + P+ VIY T+
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKM 385
I G CK ++ +A +L +M GL N +Y+ +I L + G + L +KM
Sbjct: 484 IHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538
>ref|XP_002302937.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 214 bits (546), Expect = 7e-54
Identities = 94/160 (58%), Positives = 131/160 (81%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN++L L+ N ++KA FFNE++E++ DVYSFGIMIKGCC+NG L+K+F+ L ++
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQD 190
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G PNVVIYTTLIDGCCK GD ++A+ F KMGE+GL ANQYT+TVLINGLF++GL+ D
Sbjct: 191 MGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF+L+EKMK +G FP+ +TY+ +++EYC +GK+ +AF+LF
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLF 290
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
+A F+EMRE+ + +V ++ +I G C+ + +A + + + PN++ Y TLI
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
G C VG+ DKA L ++ GL+ + TY +LI G + G +L +M+ G
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P T + +I Y ++ KAF+++
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIY 430
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++ N DKA S ++++ + + ++ I+I+G K G + E
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+ V T LID ++ + +KA Q++ M + GL + Y Y VLI+GL +G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
+ +L+ M P Y+++IH YC + +A L
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/120 (30%), Positives = 60/120 (50%)
Frame = +2
Query: 110 IMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGEL 289
++I + E+ KAF+ + E G P+V +Y LI G C G+ ++ +LF MGE+
Sbjct: 412 VLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM 471
Query: 290 GLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
+ + Y +I+G + L +M+ G P+ +YSS+I C DGK +A
Sbjct: 472 HVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/121 (28%), Positives = 59/121 (48%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++Y++ ++ C G++ +AF+ G NVV Y TLI G C+ +A++L
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M + ++ N TY LI G G + L +++K +G P TY+ +I Y
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 452 G 454
G
Sbjct: 386 G 386
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +2
Query: 44 DKACSFFNEMRE-KIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
+KA ++ M + +V DVY +G++I G C G + ++ + + P+ VIY T+
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKM 385
I G CK ++ +A +L +M GL N +Y+ +I L + G + L +KM
Sbjct: 484 IHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538
>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 210 bits (535), Expect = 1e-52
Identities = 100/160 (62%), Positives = 121/160 (75%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L LLI N ++KA FNE + + LDVYSFGIMIKGCC+ G L+K FE L E
Sbjct: 133 FNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEE 192
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G PNVV+YTTLIDGCCK GD ++ KQLFYKMGEL + ANQYTYTVLING F+ GL+ D
Sbjct: 193 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 252
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
G ELYEKMK G P+ +TY+S+I C+DGK++ AFELF
Sbjct: 253 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 292
Score = 81.6 bits (200), Expect = 1e-13
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N+++ + A F+EMRE+ + +V ++ +I G C+ + +A + +
Sbjct: 272 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 331
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGE------------------------ 286
G PN++ Y TLIDG C +G+ DKA LF +M
Sbjct: 332 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 391
Query: 287 -----------LGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
GL+ ++ TYT+L++ L R F++Y M++ G D + Y +I
Sbjct: 392 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 451
Query: 434 HEYCSDGKVSKAFELF 481
H C G + +A +LF
Sbjct: 452 HGLCVVGDMKEASKLF 467
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/117 (36%), Positives = 61/117 (52%)
Frame = +2
Query: 83 IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAK 262
IV +VY++ MI CC +G+LN AFE G NVV Y TLI G C+ +A+
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 324
Query: 263 QLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
+L +M GL+ N +Y LI+G G + L+ +MK G P TY+ +I
Sbjct: 325 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 381
Score = 70.5 bits (171), Expect = 2e-10
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +2
Query: 38 NYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYT 214
N DKA S FN+M+ + ++ I+I G + + + E G P+ V YT
Sbjct: 354 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 413
Query: 215 TLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRD 394
L+D + + +KA Q++ M + GL A+ Y Y VLI+GL G + +L++ +
Sbjct: 414 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 473
Query: 395 GAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+ Y+++I+ YC +G +A L
Sbjct: 474 HLKPNDVIYNTMIYGYCKEGSSYRALRL 501
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/123 (29%), Positives = 61/123 (49%)
Frame = +2
Query: 101 SFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKM 280
++ I++ ++ + KAF+ + E G ++ IY LI G C VGD +A +LF +
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470
Query: 281 GELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKV 460
E+ L N Y +I G + G L ++M +G P+ +Y+S I C D K
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKW 530
Query: 461 SKA 469
++A
Sbjct: 531 TEA 533
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 VLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLG 187
++ L+ +N +KA ++ M + +V D+Y +G++I G C G++ +A + + +
Sbjct: 415 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 474
Query: 188 WPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLI 328
PN VIY T+I G CK G + +A +L +MGE G+ N +Y I
Sbjct: 475 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521
>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 210 bits (535), Expect = 1e-52
Identities = 100/160 (62%), Positives = 121/160 (75%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L LLI N ++KA FNE + + LDVYSFGIMIKGCC+ G L+K FE L E
Sbjct: 120 FNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEE 179
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G PNVV+YTTLIDGCCK GD ++ KQLFYKMGEL + ANQYTYTVLING F+ GL+ D
Sbjct: 180 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 239
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
G ELYEKMK G P+ +TY+S+I C+DGK++ AFELF
Sbjct: 240 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279
Score = 81.6 bits (200), Expect = 1e-13
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N+++ + A F+EMRE+ + +V ++ +I G C+ + +A + +
Sbjct: 259 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 318
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGE------------------------ 286
G PN++ Y TLIDG C +G+ DKA LF +M
Sbjct: 319 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 378
Query: 287 -----------LGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
GL+ ++ TYT+L++ L R F++Y M++ G D + Y +I
Sbjct: 379 GVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 438
Query: 434 HEYCSDGKVSKAFELF 481
H C G + +A +LF
Sbjct: 439 HGLCVVGDMKEASKLF 454
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/117 (36%), Positives = 61/117 (52%)
Frame = +2
Query: 83 IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAK 262
IV +VY++ MI CC +G+LN AFE G NVV Y TLI G C+ +A+
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311
Query: 263 QLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
+L +M GL+ N +Y LI+G G + L+ +MK G P TY+ +I
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 368
Score = 70.5 bits (171), Expect = 2e-10
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +2
Query: 38 NYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYT 214
N DKA S FN+M+ + ++ I+I G + + + E G P+ V YT
Sbjct: 341 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 400
Query: 215 TLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRD 394
L+D + + +KA Q++ M + GL A+ Y Y VLI+GL G + +L++ +
Sbjct: 401 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 460
Query: 395 GAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+ Y+++I+ YC +G +A L
Sbjct: 461 HLKPNDVIYNTMIYGYCKEGSSYRALRL 488
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/123 (29%), Positives = 61/123 (49%)
Frame = +2
Query: 101 SFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKM 280
++ I++ ++ + KAF+ + E G ++ IY LI G C VGD +A +LF +
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457
Query: 281 GELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKV 460
E+ L N Y +I G + G L ++M +G P+ +Y+S I C D K
Sbjct: 458 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKW 517
Query: 461 SKA 469
++A
Sbjct: 518 TEA 520
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 VLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLG 187
++ L+ +N +KA ++ M + +V D+Y +G++I G C G++ +A + + +
Sbjct: 402 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 461
Query: 188 WPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLI 328
PN VIY T+I G CK G + +A +L +MGE G+ N +Y I
Sbjct: 462 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
>gb|EOY34026.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 563
Score = 209 bits (531), Expect = 4e-52
Identities = 97/159 (61%), Positives = 125/159 (78%)
Frame = +2
Query: 5 NNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENL 184
NN+LS LI +++DKA F + + ++ LDVYSFGIMIKGCC+ G+L+K+FE L E L
Sbjct: 135 NNILSFLIKFDSFDKAWMLFTKSKGRVKLDVYSFGIMIKGCCEAGDLSKSFELLGQVEEL 194
Query: 185 GWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDG 364
G PNVV+YTTLIDGCCK GD ++AK LF +M ELGL N+YTYTVLING F++GL+ DG
Sbjct: 195 GLSPNVVLYTTLIDGCCKNGDFEQAKMLFCRMEELGLVPNEYTYTVLINGFFKKGLKKDG 254
Query: 365 FELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
F LYEKM+ +G P+ +TY+ V+ EYCS+GKVSKAFE+F
Sbjct: 255 FLLYEKMQLNGVIPNLYTYNCVMTEYCSEGKVSKAFEMF 293
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 36/195 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N V++ KA F EMRE+ + +V ++ I+I G C+ ++ A + +
Sbjct: 273 YNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIGGLCRETKVWDAEKLVDQMT 332
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFR----- 343
G PN++ Y +LIDG C VG +KA LF ++ G + + TY +LI+G R
Sbjct: 333 RAGISPNLITYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDSA 392
Query: 344 -----------RGLR-------------------NDGFELYEKMKRDGAFPDSFTYSSVI 433
RG+R ELY M++ G PD +T+ +I
Sbjct: 393 AVAGLVKEMEERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLI 452
Query: 434 HEYCSDGKVSKAFEL 478
H C+ G + +A++L
Sbjct: 453 HGLCTKGNMKEAWKL 467
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +2
Query: 11 VLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLG 187
V+ I N ++A + M++ +V DVY+FG++I G C G + +A++ + + +
Sbjct: 416 VIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEMQ 475
Query: 188 WPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGF 367
PN VIY T+I G CK G + +A +L +M E GL N +Y+ I L++ G +
Sbjct: 476 LKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEAE 535
Query: 368 ELYEKMKRDGAFPDSFTYSSV 430
L +++ G P Y +
Sbjct: 536 ALLKEIVESGLKPTVSIYKLI 556
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N+++ +KA FN+++ K + ++ I+I G + + + E
Sbjct: 343 YNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEME 402
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+ V +T +I + +T++A +L+ M + GL + YT+ VLI+GL +G
Sbjct: 403 ERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMK 462
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
+ ++L + M P+ Y+++IH YC +G +A L
Sbjct: 463 EAWKLIKSMDEMQLKPNDVIYNTMIHGYCKEGSSYRALRL 502
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/117 (29%), Positives = 57/117 (48%)
Frame = +2
Query: 83 IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAK 262
++ ++Y++ ++ C G+++KAFE G NVV Y LI G C+ A+
Sbjct: 266 VIPNLYTYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIGGLCRETKVWDAE 325
Query: 263 QLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
+L +M G++ N TY LI+G G L+ ++K G P TY+ +I
Sbjct: 326 KLVDQMTRAGISPNLITYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILI 382
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/120 (28%), Positives = 53/120 (44%)
Frame = +2
Query: 110 IMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGEL 289
I+I ++ +A E + G P+V + LI G C G+ +A +L M E+
Sbjct: 415 IVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEM 474
Query: 290 GLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
L N Y +I+G + G L ++M G P+ +YSS I DGK +A
Sbjct: 475 QLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEA 534
>ref|XP_006488331.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X1 [Citrus sinensis]
gi|568870277|ref|XP_006488332.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g11690-like isoform X2 [Citrus sinensis]
Length = 586
Score = 208 bits (529), Expect = 7e-52
Identities = 96/160 (60%), Positives = 125/160 (78%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN++L +I ++ K FF+E R K+ LDVYSFGI+IKGCC+ G+LNKAFE L E
Sbjct: 156 FNSLLIFVIKSCSFHKGWLFFSEKRSKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 215
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G+ PNVVIYT+LIDGCCK GD ++AK LF K+GELGL ANQ+TYTVLI GLF+ GL+ D
Sbjct: 216 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVANQHTYTVLICGLFKNGLKKD 275
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE YEKM+ +G P +TY+ +IHEYC++GKV++ F+LF
Sbjct: 276 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVNEGFKLF 315
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/130 (34%), Positives = 69/130 (53%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
+V ++ +I G C GE +KAF ++ G P+VV Y LI K G++ A L
Sbjct: 361 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 420
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M E G+ ++ TYT+LI+ R FE+Y M++ G PD +TY +IH C
Sbjct: 421 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 480
Query: 452 GKVSKAFELF 481
G + +A +LF
Sbjct: 481 GNMKEASKLF 490
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++ DKA FN+++ V ++ ++I+ K G A + + E
Sbjct: 365 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 424
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+ V YT LID + D +KA +++ M + G + + YTY VLI+GL +G
Sbjct: 425 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 484
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
+ +L+ M P+ Y+ +I YC +G +A L
Sbjct: 485 EASKLFNSMWETKLEPNDVLYNMMIFGYCKEGNSYRALRL 524
Score = 73.9 bits (180), Expect = 2e-11
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++ N A EM E+ I ++ I+I ++ ++ KAFE + +
Sbjct: 400 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 459
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G+ P+V Y LI G C G+ +A +LF M E L N Y ++I G + G
Sbjct: 460 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVLYNMMIFGYCKEGNSY 519
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
L +M G P+ +YSS I C DGK +A
Sbjct: 520 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 556
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Frame = +2
Query: 68 EMREKIVLD-----VYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGC 232
E EK+ L+ +Y++ +I C G++N+ F+ + NVV Y TLI G
Sbjct: 278 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVNEGFKLFDEMRHREVACNVVTYNTLICGL 337
Query: 233 CKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
CK +A++L +M G++ N TY LI+G G + F L+ ++K +G P
Sbjct: 338 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 397
Query: 413 FTYSSVIHEYCSDGKVSKAFEL 478
TY+ +I + G A +L
Sbjct: 398 VTYNVLIRAFSKAGNSKMASDL 419
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = +2
Query: 11 VLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLG 187
++ + ++ +KA ++ M++ DVY++G++I G C G + +A +
Sbjct: 438 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 497
Query: 188 WPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGF 367
PN V+Y +I G CK G++ +A +L +M E GL N +Y+ I L + G +
Sbjct: 498 LEPNDVLYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 557
Query: 368 ELYEKMKRDGAFPDSFTYS 424
L +M + G P Y+
Sbjct: 558 VLLNQMLKLGLKPSVSLYN 576
>ref|XP_006358860.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Solanum tuberosum]
Length = 561
Score = 208 bits (529), Expect = 7e-52
Identities = 98/160 (61%), Positives = 123/160 (76%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN++LS +I +++KA F E K LD+YSFGI+IKGCC+ G+LN AFE LA +
Sbjct: 131 FNSILSSVIKNGSFEKAWLIFEESMGKEFLDMYSFGIVIKGCCEFGDLNGAFEALAKLKQ 190
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+GW PNVVIYTT+IDGC K GD +AK+LF M G+ NQYTY+VL+NG FR+GL+ D
Sbjct: 191 MGWRPNVVIYTTIIDGCFKYGDAGRAKELFSTMSVEGIIPNQYTYSVLLNGFFRQGLKTD 250
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFELYEKMK DG FPD +TY+S+I+ YCSDG+VSKAFELF
Sbjct: 251 GFELYEKMKLDGVFPDIYTYNSLINVYCSDGEVSKAFELF 290
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N+++++ KA F+EMR +V +V ++ +I+G C+ + +A + + +
Sbjct: 270 YNSLINVYCSDGEVSKAFELFDEMRHNGVVYNVVTYNTLIRGLCQEKRVLEAEKLVDQMK 329
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G PN++ Y TLIDGCC G +K LF ++ GL TY LI G R G +
Sbjct: 330 LAGLHPNLITYNTLIDGCCSAGKLEKGLTLFNQIKSYGLTPTSITYNTLIAGFSRAGNLS 389
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
+ +M+ G FP TY+ +I + + KA E+F
Sbjct: 390 KVVDFVREMEERGIFPSKVTYTILIDAFARSNDMEKALEVF 430
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Frame = +2
Query: 68 EMREKIVLD-----VYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGC 232
E+ EK+ LD +Y++ +I C +GE++KAFE + G NVV Y TLI G
Sbjct: 253 ELYEKMKLDGVFPDIYTYNSLINVYCSDGEVSKAFELFDEMRHNGVVYNVVTYNTLIRGL 312
Query: 233 CKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
C+ +A++L +M GL N TY LI+G G G L+ ++K G P S
Sbjct: 313 CQEKRVLEAEKLVDQMKLAGLHPNLITYNTLIDGCCSAGKLEKGLTLFNQIKSYGLTPTS 372
Query: 413 FTYSSVIHEYCSDGKVSKAFE 475
TY+++I + G +SK +
Sbjct: 373 ITYNTLIAGFSRAGNLSKVVD 393
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMR-EKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
+A F+ M E I+ + Y++ +++ G + G FE + G P++ Y +LI
Sbjct: 215 RAKELFSTMSVEGIIPNQYTYSVLLNGFFRQGLKTDGFELYEKMKLDGVFPDIYTYNSLI 274
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
+ C G+ KA +LF +M G+ N TY LI GL + + +L ++MK G
Sbjct: 275 NVYCSDGEVSKAFELFDEMRHNGVVYNVVTYNTLIRGLCQEKRVLEAEKLVDQMKLAGLH 334
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P+ TY+++I CS GK+ K LF
Sbjct: 335 PNLITYNTLIDGCCSAGKLEKGLTLF 360
>ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527384|gb|EEF29525.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 505
Score = 204 bits (519), Expect = 1e-50
Identities = 95/160 (59%), Positives = 121/160 (75%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN +L L+ ++K FNE++ KI LDVY++GIMIKGCC+ G K FE L E
Sbjct: 121 FNTLLDSLVKSKCFEKLWFVFNEVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEK 180
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+G PNVVIYTTLIDGCCK GD +AK LF KMGE+ L ANQYTYTVLING F++GLR D
Sbjct: 181 MGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKD 240
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFEL+EKM+ DG FP+ +TY+ +I+E+C++GK+ KA+ELF
Sbjct: 241 GFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELF 280
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +2
Query: 32 GNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVI 208
G N+ EM E+ I ++ I+ + G++ KAF F + E +G P+V I
Sbjct: 326 GGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHI 385
Query: 209 YTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMK 388
Y L+ G C G+ +A +LF M E+ L N+ Y +ING + G ++M+
Sbjct: 386 YGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEME 445
Query: 389 RDGAFPDSFTYSSVIHEYCSDGKVSKA 469
P+ +YSS I C DGK +A
Sbjct: 446 DKRLVPNVASYSSTIGILCKDGKWQEA 472
Score = 75.9 bits (185), Expect = 5e-12
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 37/197 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKAC---SFFN--------EMREKIVLD-----VYSFGIMIKGCCK 133
FN + + +V N Y FF E+ EK+ LD +Y++ MI C
Sbjct: 210 FNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCN 269
Query: 134 NGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKV---------------------GDT 250
G+L+KA+E G NVV Y TLI G C+ G+
Sbjct: 270 EGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNW 329
Query: 251 DKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSV 430
L +M E G++ ++ TYT+L N R G F Y M++ G PD Y +
Sbjct: 330 VDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVL 389
Query: 431 IHEYCSDGKVSKAFELF 481
+H C G + +A +LF
Sbjct: 390 LHGLCVKGNMKEASKLF 406
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +2
Query: 44 DKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
+KA F++ M + +V DV+ +G+++ G C G + +A + + PN V+Y T+
Sbjct: 365 EKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTM 424
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
I+G CK G++ +A + +M + L N +Y+ I L + G + L KM+ G
Sbjct: 425 INGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGL 484
Query: 401 FPDSFTYSSV 430
P Y+ +
Sbjct: 485 EPSVSIYNII 494
>ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g11690 gi|4539460|emb|CAB39940.1| putative protein
[Arabidopsis thaliana] gi|7267869|emb|CAB78212.1|
putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 202 bits (515), Expect = 3e-50
Identities = 88/160 (55%), Positives = 125/160 (78%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FN +L+ ++ +++++ SFFNE + K+VLDVYSFGI+IKGCC+ GE+ K+F+ L
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGCCK G+ +KAK LF++MG+LGL AN+ TYTVLINGLF+ G++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE+YEKM+ DG FP+ +TY+ V+++ C DG+ AF++F
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N V++ L A F+EMRE+ + ++ ++ +I G C+ +LN+A + + +
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
+ G PN++ Y TLIDG C VG KA L + GL+ + TY +L++G R+G +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
++ ++M+ G P TY+ +I + + KA +L
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/130 (32%), Positives = 70/130 (53%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++ ++ +I G C G+L KA ++ G P++V Y L+ G C+ GDT A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M E G+ ++ TYT+LI+ R +L M+ G PD TYS +IH +C
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 452 GKVSKAFELF 481
G++++A LF
Sbjct: 457 GQMNEASRLF 466
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ I++ G C+ G+ + A + + E G P+ V YT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D + + +KA QL M ELGL + +TY+VLI+G +G N+ L++ M
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFEL 478
P+ Y+++I YC +G +A +L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKL 500
Score = 66.6 bits (161), Expect = 3e-09
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
+N +KA M E +V DV+++ ++I G C G++N+A PN VIY
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T+I G CK G + +A +L +M E LA N +Y +I L + + L EKM
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Query: 392 DGAFPDSFTYSSVIHEYCSDGKVS 463
G P S + S+I +D VS
Sbjct: 542 SGIDP-STSILSLISRAKNDSHVS 564
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 68 EMREKIVLD-----VYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGC 232
EM EK+ D +Y++ ++ CK+G AF+ G N+V Y TLI G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 233 CKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
C+ ++A ++ +M G+ N TY LI+G G L +K G P
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 413 FTYSSVIHEYCSDGKVSKAFEL 478
TY+ ++ +C G S A ++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKM 395
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Frame = +2
Query: 50 ACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLID 226
A EM E+ I ++ I+I ++ + KA + E LG P+V Y+ LI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 227 GCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFP 406
G C G ++A +LF M E N+ Y +I G + G +L ++M+ P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 407 DSFTYSSVIHEYCSDGKVSKAFEL 478
+ +Y +I C + K +A L
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERL 535
>ref|XP_004489566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X1 [Cicer arietinum]
gi|502091505|ref|XP_004489567.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g11690-like isoform X2 [Cicer arietinum]
Length = 571
Score = 202 bits (513), Expect = 5e-50
Identities = 96/160 (60%), Positives = 120/160 (75%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L+LLI N + KA FNE++ K+VLDVYSFGIMIKGCC+ G+L K+F+ LA
Sbjct: 133 FNNLLNLLIRSNCFCKAWLVFNELKSKVVLDVYSFGIMIKGCCEAGDLMKSFQLLAMMGE 192
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G PNVVIYTTLIDGCCK GD AK+LF KM +L L ANQ+TY++LING F++GL+ +
Sbjct: 193 TGLSPNVVIYTTLIDGCCKNGDVHLAKKLFSKMEKLDLVANQHTYSILINGFFKQGLQKE 252
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF LYE MKR G P+ + YS VI EYC+DG + KAF +F
Sbjct: 253 GFHLYENMKRSGIIPNVYAYSCVIGEYCNDGNIDKAFNVF 292
Score = 94.0 bits (232), Expect = 2e-17
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Frame = +2
Query: 38 NYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYT 214
N DKA + FNEMREK I V ++ ++I G C+ +L +A + + +G PN+ Y
Sbjct: 284 NIDKAFNVFNEMREKGIACGVMTYNLLINGLCRTKKLGEAVKLVYRVNRVGIRPNIFTYN 343
Query: 215 TLIDGCCKVGDTDKAKQLFYKMGELGL--------------------------------- 295
TLI G C VG D A +LF ++ GL
Sbjct: 344 TLIKGYCDVGKIDTAVRLFNELKSNGLSPTVVTYNTLITGYSKIGNLAGALNLVKEMEER 403
Query: 296 --AANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
A ++ TYT+L+ G R + FE++ M++ G D +TY ++IH C +G + +A
Sbjct: 404 HIAPSKVTYTILLGGFVRLNYMDKAFEIHSLMEKSGLVSDVYTYGALIHGLCMNGNMKEA 463
Query: 470 FELF 481
++F
Sbjct: 464 SKVF 467
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/138 (28%), Positives = 68/138 (49%)
Frame = +2
Query: 65 NEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVG 244
N R I+ +VY++ +I C +G ++KAF G V+ Y LI+G C+
Sbjct: 259 NMKRSGIIPNVYAYSCVIGEYCNDGNIDKAFNVFNEMREKGIACGVMTYNLLINGLCRTK 318
Query: 245 DTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYS 424
+A +L Y++ +G+ N +TY LI G G + L+ ++K +G P TY+
Sbjct: 319 KLGEAVKLVYRVNRVGIRPNIFTYNTLIKGYCDVGKIDTAVRLFNELKSNGLSPTVVTYN 378
Query: 425 SVIHEYCSDGKVSKAFEL 478
++I Y G ++ A L
Sbjct: 379 TLITGYSKIGNLAGALNL 396
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +2
Query: 44 DKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
D A FNE++ + V ++ +I G K G L A + E P+ V YT L
Sbjct: 356 DTAVRLFNELKSNGLSPTVVTYNTLITGYSKIGNLAGALNLVKEMEERHIAPSKVTYTIL 415
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
+ G ++ DKA ++ M + GL ++ YTY LI+GL G + ++++ +
Sbjct: 416 LGGFVRLNYMDKAFEIHSLMEKSGLVSDVYTYGALIHGLCMNGNMKEASKVFKTLGEIHI 475
Query: 401 FPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+S Y +IH YC +G +A L
Sbjct: 476 EPNSVIYDIMIHGYCKEGNSYRALRL 501
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +2
Query: 38 NYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYT 214
N A + EM E+ I ++ I++ G + ++KAFE + E G +V Y
Sbjct: 389 NLAGALNLVKEMEERHIAPSKVTYTILLGGFVRLNYMDKAFEIHSLMEKSGLVSDVYTYG 448
Query: 215 TLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRD 394
LI G C G+ +A ++F +GE+ + N Y ++I+G + G L ++M
Sbjct: 449 ALIHGLCMNGNMKEASKVFKTLGEIHIEPNSVIYDIMIHGYCKEGNSYRALRLLKEMIGK 508
Query: 395 GAFPDSFTYSSVIHEYCSDGKVSKA 469
G P+ ++ S I C DGK+ +A
Sbjct: 509 GMVPNVASFCSTIGILCRDGKLKEA 533
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
N DKA + M + +V DVY++G +I G C NG + +A + + PN VIY
Sbjct: 423 NYMDKAFEIHSLMEKSGLVSDVYTYGALIHGLCMNGNMKEASKVFKTLGEIHIEPNSVIY 482
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
+I G CK G++ +A +L +M G+ N ++ I L R G + + + M
Sbjct: 483 DIMIHGYCKEGNSYRALRLLKEMIGKGMVPNVASFCSTIGILCRDGKLKEAELVLQDMVN 542
Query: 392 DGAFPDSFTYSSV 430
G P Y+ V
Sbjct: 543 LGLKPSISLYNMV 555
>ref|XP_004294524.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Fragaria vesca subsp. vesca]
Length = 569
Score = 202 bits (513), Expect = 5e-50
Identities = 91/160 (56%), Positives = 121/160 (75%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNNVL L+ +++KA FNE + ++ LD+YSFGI++K CC+ GEL++ F L E
Sbjct: 134 FNNVLGFLVKSRDFEKAWRVFNEFKSRVQLDLYSFGIVVKSCCEGGELDRGFGVLDETEE 193
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
+GW PNVVIYTTLIDGCCK GD ++A+++F KMGE+GL ANQYTYTVLI+G+F++G +
Sbjct: 194 MGWSPNVVIYTTLIDGCCKNGDLERAEKMFCKMGEVGLVANQYTYTVLIDGMFKKGRSKE 253
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFELYEKMK +G P++ TYS +I C DGK+S A ELF
Sbjct: 254 GFELYEKMKINGVVPNTRTYSCLISGLCKDGKMSSALELF 293
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +2
Query: 59 FFNEM-REKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCC 235
F NEM R+ I V +F +I G C G+L+KA ++ G P++V Y LI G
Sbjct: 327 FVNEMKRDGISPSVVTFNTLIDGFCGIGKLDKAMSLFDQLKSSGQSPSLVTYNVLIRGFA 386
Query: 236 KVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSF 415
K ++ L +M G+A ++ TYT++I+ L R F ++ M++ G PD +
Sbjct: 387 KARNSTGVTDLLREMENRGMAPSKVTYTIVIDALVRSDDMERAFHVFSSMEKSGLMPDVY 446
Query: 416 TYSSVIHEYCSDGKVSKAFEL 478
TY +IH C G + +A +L
Sbjct: 447 TYGVLIHGLCMKGNMIEASKL 467
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
FN ++ DKA S F++++ + ++ ++I+G K + L E
Sbjct: 343 FNTLIDGFCGIGKLDKAMSLFDQLKSSGQSPSLVTYNVLIRGFAKARNSTGVTDLLREME 402
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
N G P+ V YT +ID + D ++A +F M + GL + YTY VLI+GL +G
Sbjct: 403 NRGMAPSKVTYTIVIDALVRSDDMERAFHVFSSMEKSGLMPDVYTYGVLIHGLCMKGNMI 462
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
+ +L + M P+ ++ +IH YC +G +A L
Sbjct: 463 EASKLLQSMSDSNLEPNDVIFNIMIHGYCKEGSSYRALRL 502
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/123 (27%), Positives = 61/123 (49%)
Frame = +2
Query: 101 SFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKM 280
++ I+I ++ ++ +AF + E G P+V Y LI G C G+ +A +L M
Sbjct: 412 TYTIVIDALVRSDDMERAFHVFSSMEKSGLMPDVYTYGVLIHGLCMKGNMIEASKLLQSM 471
Query: 281 GELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKV 460
+ L N + ++I+G + G L ++M++ G P+ +YSS I +DGK
Sbjct: 472 SDSNLEPNDVIFNIMIHGYCKEGSSYRALRLLKEMRKKGMVPNVASYSSTIGVMSNDGKW 531
Query: 461 SKA 469
+A
Sbjct: 532 EEA 534
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 11 VLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLG 187
V+ L+ ++ ++A F+ M + ++ DVY++G++I G C G + +A + L +
Sbjct: 416 VIDALVRSDDMERAFHVFSSMEKSGLMPDVYTYGVLIHGLCMKGNMIEASKLLQSMSDSN 475
Query: 188 WPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGF 367
PN VI+ +I G CK G + +A +L +M + G+ N +Y+ I + G +
Sbjct: 476 LEPNDVIFNIMIHGYCKEGSSYRALRLLKEMRKKGMVPNVASYSSTIGVMSNDGKWEEAE 535
Query: 368 ELYEKMKRDGAFPDSFTYSSV 430
L + M P Y+ +
Sbjct: 536 MLLKGMMESDLKPSISLYNII 556
>ref|XP_006396864.1| hypothetical protein EUTSA_v10028537mg [Eutrema salsugineum]
gi|557097881|gb|ESQ38317.1| hypothetical protein
EUTSA_v10028537mg [Eutrema salsugineum]
Length = 575
Score = 201 bits (510), Expect = 1e-49
Identities = 89/160 (55%), Positives = 124/160 (77%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN LS ++ +++++ +FFNE + K+VLDVYSFGI+IKGCC++GE+ K+FE L
Sbjct: 132 FNNFLSFVVGSSSFEEFWAFFNENKSKVVLDVYSFGIVIKGCCESGEIEKSFEVLVELRE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGC K G+ +KAK LF +MG++GL AN+ TYTVLINGLF+ G++
Sbjct: 192 NGFSPNVVIYTTLIDGCYKKGEIEKAKALFSEMGKIGLVANERTYTVLINGLFKNGIKKQ 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFELYEKM+ DG FP+ +TY+ V+++ C DG+ AF++F
Sbjct: 252 GFELYEKMQNDGVFPNLYTYNCVMNQLCKDGRTKDAFKMF 291
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/130 (33%), Positives = 72/130 (55%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++ ++ +I G C G+L KA ++ G P++V Y L+ G CK GDT A ++
Sbjct: 337 NLITYNTLIDGFCNVGKLGKALSLCRDLKSRGMSPSLVTYNILVSGFCKKGDTSGAAKMV 396
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M E G+ ++ TYT+LI+ R +L M++ G PD+ TYS +IH +C
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMERAIQLRASMEKLGVVPDAHTYSVLIHGFCIK 456
Query: 452 GKVSKAFELF 481
G++++A LF
Sbjct: 457 GQMNEASRLF 466
Score = 86.7 bits (213), Expect = 3e-15
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Frame = +2
Query: 44 DKACSFFNEMRE-KIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
+KA + F+EM + +V + ++ ++I G KNG + FE +N G PN+ Y +
Sbjct: 215 EKAKALFSEMGKIGLVANERTYTVLINGLFKNGIKKQGFELYEKMQNDGVFPNLYTYNCV 274
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
++ CK G T A ++F +M G++ N TY LI GL R ++ +L ++MK DG
Sbjct: 275 MNQLCKDGRTKDAFKMFDEMRARGVSCNIVTYNTLIGGLCREMKASEANKLMDQMKSDGI 334
Query: 401 FPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+ TY+++I +C+ GK+ KA L
Sbjct: 335 NPNLITYNTLIDGFCNVGKLGKALSL 360
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ I++ G CK G+ + A + + E G P+ V YT LI
Sbjct: 356 KALSLCRDLKSRGMSPSLVTYNILVSGFCKKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D + + ++A QL M +LG+ + +TY+VLI+G +G N+ L+ M
Sbjct: 416 DTFARSDNMERAIQLRASMEKLGVVPDAHTYSVLIHGFCIKGQMNEASRLFRSMVEKKLE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFEL 478
P+ Y+++I YC +G +A L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRL 500
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/129 (27%), Positives = 58/129 (44%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++Y++ ++ CK+G AF+ G N+V Y TLI G C+ +A +L
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFKMFDEMRARGVSCNIVTYNTLIGGLCREMKASEANKLM 326
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M G+ N TY LI+G G L +K G P TY+ ++ +C
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCNVGKLGKALSLCRDLKSRGMSPSLVTYNILVSGFCKK 386
Query: 452 GKVSKAFEL 478
G S A ++
Sbjct: 387 GDTSGAAKM 395
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +2
Query: 83 IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAK 262
+V D +++ ++I G C G++N+A PN VIY T+I G CK G + +A
Sbjct: 439 VVPDAHTYSVLIHGFCIKGQMNEASRLFRSMVEKKLEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 263 QLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
+L +M + LA N +Y+ LI L + + +L EKM G P +
Sbjct: 499 RLLREMVDKELAPNVASYSNLIEVLCKERNLKEATDLVEKMIDSGMDPSA 548
>ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332932|gb|EFH63350.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 568
Score = 201 bits (510), Expect = 1e-49
Identities = 86/160 (53%), Positives = 125/160 (78%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L+ ++ +++++ FFNE + K+ LDVYSFGI+IKGCC+ GE+ K+F+ L
Sbjct: 132 FNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGCCK G+ +KAK LF++MG+ GL AN++TYTVLI+GLF+ G++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE+YEKM+ DG FP+ +TY+ V++++C DG+ AF+LF
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/130 (33%), Positives = 70/130 (53%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++ ++ +I G C G+L KA ++ G P++V Y L+ G CK GDT A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M E G+ ++ TYT+LI+ R +L M+ G PD TYS +IH +C
Sbjct: 397 KEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIK 456
Query: 452 GKVSKAFELF 481
G++++A LF
Sbjct: 457 GQMNEASRLF 466
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ I++ G CK G+ + A + + E G P+ + YT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D ++ + +KA QL M ELGL + +TY+VLI+G +G N+ L++ M
Sbjct: 416 DTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P+ Y++++ YC +G +A LF
Sbjct: 476 PNKVIYNTMVLGYCKEGSSYRALRLF 501
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Frame = +2
Query: 50 ACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLID 226
A F+EMRE+ + ++ ++ +I G C+ + N+A + + ++ G PN++ Y TLID
Sbjct: 287 AFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLID 346
Query: 227 GCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFP 406
G C VG KA L + GL+ + TY +L++G ++G + ++ ++M+ G P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406
Query: 407 DSFTYSSVIHEYCSDGKVSKAFEL 478
TY+ +I + + KA +L
Sbjct: 407 SKITYTILIDTFARMDNMEKAIQL 430
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 EMREKIVLD-----VYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGC 232
EM EK+ D +Y++ ++ CK+G AF+ G N+V Y TLI G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGL 313
Query: 233 CKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
C+ ++A ++ +M G+ N TY LI+G G L +K G P
Sbjct: 314 CREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 413 FTYSSVIHEYCSDGKVSKA 469
TY+ ++ +C G S A
Sbjct: 374 VTYNILVSGFCKKGDTSGA 392
Score = 61.2 bits (147), Expect = 1e-07
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
+N +KA + M E + DV+++ ++I G C G++N+A PN VIY
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T++ G CK G + +A +LF +M E L N +Y +I L + + L EKM
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541
Query: 392 DGAFPDSFTYSSVIHEYCSDGKVS 463
G P S + ++I +D VS
Sbjct: 542 TGIDP-SDSILNLISRAKNDSHVS 564
>ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318447|gb|EFH48869.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 575
Score = 199 bits (505), Expect = 4e-49
Identities = 85/160 (53%), Positives = 124/160 (77%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L+ ++ +++++ FFNE + K+VLDVYSFGI+IKGCC+ GE+ K+F+ L
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGCCK G+ +KAK LF++MG+ GL AN++TYTVLI+GLF+ G++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE+YEKM+ G FP+ +TY+ V+++ C DG+ AF++F
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291
Score = 86.3 bits (212), Expect = 4e-15
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++ L ++A ++M+ ++ ++ ++ +I G C G+L KA +
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLK 365
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
+ G P++V Y L+ G C+ GDT A ++ +M E G+ ++ TYT+LI+ R
Sbjct: 366 SRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
+L M+ G PD TYS +IH +C G++++A LF
Sbjct: 426 TAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N V++ L A F+EMRE+ + ++ ++ +I G C+ + N+A + + +
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
+ PN++ Y TLIDG C VG KA L + GL+ + TY VL++G R+G +
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
++ ++M+ G P TY+ +I + + A +L
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ +++ G C+ G+ + A + + E G P+ V YT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D + + + A QL M ELGL + +TY+VLI+G +G N+ L++ M
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P+ Y+++I YC +G +A LF
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLF 501
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
+N + A + M E +V DV+++ ++I G C G++N+A PN VIY
Sbjct: 422 DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIY 481
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T+I G CK G + +A +LF M E LA N +Y+ LI L + + +L EKM
Sbjct: 482 NTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMID 541
Query: 392 DGAFPDSFTYSSVIHEYCSDGKVSKAFE 475
G P S T ++I +D V++ +
Sbjct: 542 SGIDP-SDTICNLISRAKTDSPVAQIID 568
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 62 FNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCK 238
+ +M+E V ++Y++ ++ CK+G AF+ G N+V Y TLI G C+
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 239 VGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFT 418
++A ++ +M + N TY LI+G G L +K G P T
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 419 YSSVIHEYCSDGKVSKAFEL 478
Y+ ++ +C G S A ++
Sbjct: 376 YNVLVSGFCRKGDTSGAAKM 395
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 50 ACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLID 226
A EM E+ I ++ I+I ++ + A + + E LG P+V Y+ LI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 227 GCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFP 406
G C G ++A +LF M E L N+ Y +I G + G L+ M+ P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511
Query: 407 DSFTYSSVIHEYCSDGKVSKAFEL 478
+ +YS +I C + K+ +A +L
Sbjct: 512 NVASYSYLIRVLCKERKLKEAEDL 535
>ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318454|gb|EFH48876.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 584
Score = 197 bits (501), Expect = 1e-48
Identities = 85/160 (53%), Positives = 123/160 (76%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L+ ++ +++++ FFNE + K+VLDVYSFGI+IKGCC+ GE+ K+F+ L
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGCCK G+ +KAK LF++MG+ GL AN++TYTVLI+GLF+ G++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE+YEKM+ G FP+ TY+ V+++ C DG+ AF++F
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N V++ L A F+EMRE+ + ++ ++ +I G C+ + N+A E + +
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK 330
Query: 179 NLGWPPNVVIYTTLIDGCC-----------------------------------KVGDTD 253
+ G PN++ Y TLIDG C K GDT
Sbjct: 331 SDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 254 KAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
A ++ +M E G+ ++ TYT+LI+ R +L M+ G PD TYS +I
Sbjct: 391 GAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450
Query: 434 HEYCSDGKVSKAFELF 481
H +C G++++A LF
Sbjct: 451 HGFCIKGRMNEASRLF 466
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ I++ G CK G+ + A + + E G P+ V YT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D + + +KA QL M ELGL + +TY+VLI+G +G N+ L++ M
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P+ Y++++ YC +G +A LF
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLF 501
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
+N +KA + M E + DV+++ ++I G C G +N+A + PN VIY
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIY 481
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T++ G CK G + +A +LF +M E L N +Y +I L + + L EKM
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541
Query: 392 DGAFP 406
G P
Sbjct: 542 SGIGP 546
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 62 FNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCK 238
+ +M+E V +++++ ++ CK+G AF+ G N+V Y TLI G C+
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 239 VGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFT 418
++A ++ +M G+ N TY LI+G L +K G P T
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 419 YSSVIHEYCSDGKVSKA 469
Y+ ++ +C G S A
Sbjct: 376 YNILVSGFCKKGDTSGA 392
Score = 57.0 bits (136), Expect = 3e-06
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 68 EMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVG 244
EM E+ I ++ I+I ++ + KA + + E LG P+V Y+ LI G C G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 245 DTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYS 424
++A +LF M E N+ Y ++ G + G L+ +M+ P+ +Y
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517
Query: 425 SVIHEYCSDGKVSKA 469
+I C + K +A
Sbjct: 518 YMIEVLCKERKSKEA 532
>ref|XP_003528529.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 543
Score = 196 bits (498), Expect = 3e-48
Identities = 92/160 (57%), Positives = 116/160 (72%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L LLI N +DKA FNE++ K+VLD YSFGIMIKGCC+ G K F LA E
Sbjct: 114 FNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE 173
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G PNVVIYTTLIDGCCK G+ AK LF KM LGL N +TY+VL+NG F++GL+ +
Sbjct: 174 FGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQRE 233
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF++YE MKR G P+++ Y+ +I EYC+DG V KAF++F
Sbjct: 234 GFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVF 273
Score = 82.8 bits (203), Expect = 4e-14
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++S DKA F EMREK I V ++ I+I G C+ + +A + +
Sbjct: 253 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 312
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGL--------------------- 295
+G PN+V Y LI+G C V D A +LF ++ GL
Sbjct: 313 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 372
Query: 296 --------------AANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
A ++ TYT+LI+ R E++ M++ G PD +TYS ++
Sbjct: 373 GALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 432
Query: 434 HEYCSDGKVSKAFELF 481
H C G + +A +LF
Sbjct: 433 HGLCVHGNMKEASKLF 448
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/138 (29%), Positives = 69/138 (50%)
Frame = +2
Query: 65 NEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVG 244
N R IV + Y++ +I C +G ++KAF+ A G V+ Y LI G C+
Sbjct: 240 NMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 299
Query: 245 DTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYS 424
+A +L +K+ ++GL+ N TY +LING + L+ ++K G P TY+
Sbjct: 300 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYN 359
Query: 425 SVIHEYCSDGKVSKAFEL 478
++I Y ++ A +L
Sbjct: 360 TLIAGYSKVENLAGALDL 377
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 44 DKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
D A FN+++ + + ++ +I G K L A + + E P+ V YT L
Sbjct: 337 DSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTIL 396
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
ID ++ T+KA ++ M + GL + YTY+VL++GL G + +L++ +
Sbjct: 397 IDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHL 456
Query: 401 FPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+S Y+++IH YC +G +A L
Sbjct: 457 QPNSVIYNTMIHGYCKEGSSYRALRL 482
Score = 63.9 bits (154), Expect = 2e-08
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N +++ N A EM E+ + ++ I+I + KA E + E
Sbjct: 358 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 417
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+V Y+ L+ G C G+ +A +LF +GE+ L N Y +I+G + G
Sbjct: 418 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 477
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
L +M + G P+ ++ S I C D K +A
Sbjct: 478 RALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEA 514
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
N+ +KAC + M + +V DVY++ +++ G C +G + +A + + PN VIY
Sbjct: 404 NHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 463
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T+I G CK G + +A +L +M + G+ N ++ I L R + L +M
Sbjct: 464 NTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 523
Query: 392 DGAFPDSFTYSSV 430
G P Y V
Sbjct: 524 SGLKPSVSLYKMV 536
>ref|XP_006287393.1| hypothetical protein CARUB_v10000599mg [Capsella rubella]
gi|482556099|gb|EOA20291.1| hypothetical protein
CARUB_v10000599mg [Capsella rubella]
Length = 561
Score = 194 bits (492), Expect = 1e-47
Identities = 84/160 (52%), Positives = 122/160 (76%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN+L+ ++ +++++ FFNE + K+ LDVYSFGI+IKGCC+ GE+ K+F+
Sbjct: 132 FNNLLTFVVGSSSFNEWWCFFNESKRKVDLDVYSFGIVIKGCCEAGEIEKSFDLFVELRE 191
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G+ PNVVIYTTLIDGCCK G+ +KAK LF++MG+LGL AN+ TYTVLI+ LF+ G++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFQMGKLGLVANERTYTVLIHWLFKNGIKKL 251
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GFE+YEKM+ DG FP+ +TY+ V+++ C DG+ AF++F
Sbjct: 252 GFEMYEKMQEDGVFPNIYTYNCVMNQLCKDGRTKDAFKVF 291
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/129 (32%), Positives = 69/129 (53%)
Frame = +2
Query: 92 DVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVGDTDKAKQLF 271
++ ++ +I G C G+L KA ++ G P++V Y L+ G CK GDT A ++
Sbjct: 337 NLITYNTLIDGFCGMGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAAKMV 396
Query: 272 YKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVIHEYCSD 451
+M E G+ ++ TYT+LI+ R +L M+ G PD TYS +IH +C
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 452 GKVSKAFEL 478
G++++A L
Sbjct: 457 GQMNEASRL 465
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +2
Query: 47 KACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLI 223
KA S +++ + + + ++ I++ G CK G+ + A + + E G P+ V YT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 224 DGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAF 403
D + + +KA QL M ELGL + +TY+VLI+G +G N+ L + M
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLLKSMVEKKLE 475
Query: 404 PDSFTYSSVIHEYCSDGKVSKAFELF 481
P+ Y+++I YC +G +A LF
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLF 501
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N V++ L A F+EMRE+ + ++ ++ +I G C+ + ++A + + +
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKASEANKVMDQMQ 330
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
+ G PN++ Y TLIDG C +G KA L + GL+ + TY +L++G ++G +
Sbjct: 331 SDGINPNLITYNTLIDGFCGMGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFEL 478
++ ++M+ G P TY+ +I + + KA +L
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 69.3 bits (168), Expect = 5e-10
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
+N +KA + M E +V DV+++ ++I G C G++N+A L PN VIY
Sbjct: 422 DNMEKAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLLKSMVEKKLEPNEVIY 481
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKM 385
T+I G CK G + +A +LF +M E LA N +Y LI L + + +L EKM
Sbjct: 482 NTMILGYCKEGSSYRALRLFREMEEKELAPNVASYRYLIEVLCKERKSKEAEDLVEKM 539
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +2
Query: 68 EMREKIVLD-----VYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGC 232
EM EK+ D +Y++ ++ CK+G AF+ G N+V Y TLI G
Sbjct: 254 EMYEKMQEDGVFPNIYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 233 CKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDS 412
C+ +A ++ +M G+ N TY LI+G G L +K G P
Sbjct: 314 CREMKASEANKVMDQMQSDGINPNLITYNTLIDGFCGMGKLGKALSLCRDLKSRGLSPSL 373
Query: 413 FTYSSVIHEYCSDGKVSKAFEL 478
TY+ ++ +C G S A ++
Sbjct: 374 VTYNILVSGFCKKGDTSGAAKM 395
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 50 ACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLID 226
A EM E+ I ++ I+I ++ + KA + + E LG P+V Y+ LI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 227 GCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFP 406
G C G ++A +L M E L N+ Y +I G + G L+ +M+ P
Sbjct: 452 GFCIKGQMNEASRLLKSMVEKKLEPNEVIYNTMILGYCKEGSSYRALRLFREMEEKELAP 511
Query: 407 DSFTYSSVIHEYCSDGKVSKAFEL 478
+ +Y +I C + K +A +L
Sbjct: 512 NVASYRYLIEVLCKERKSKEAEDL 535
>ref|XP_006581214.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X2 [Glycine max]
gi|571458747|ref|XP_006581215.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g11690-like isoform X3 [Glycine max]
Length = 568
Score = 193 bits (490), Expect = 2e-47
Identities = 90/160 (56%), Positives = 115/160 (71%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN++ LLI N +DKA FNE++ K+VLD YSFGIMIKGCC+ G K F LA E
Sbjct: 127 FNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE 186
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G PNVVIYTTLIDGCCK G+ AK LF KM LGL N +TY+VL+NG F++GL+ +
Sbjct: 187 FGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQRE 246
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF++YE MKR G P+++ Y+ +I EYC+ G V KAF++F
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF 286
Score = 89.7 bits (221), Expect = 4e-16
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++S G DKA F EMREK I V ++ I+I G C+ + +A + +
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGL--------------------- 295
+G PN+V Y LI+G C VG D A +LF ++ GL
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 296 --------------AANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
A ++ TYT+LI+ R E++ M++ G PD +TYS +I
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 434 HEYCSDGKVSKAFELF 481
H C G + +A +LF
Sbjct: 446 HGLCVHGNMKEASKLF 461
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/138 (30%), Positives = 69/138 (50%)
Frame = +2
Query: 65 NEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVG 244
N R IV + Y++ +I C G ++KAF+ A G V+ Y LI G C+
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312
Query: 245 DTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYS 424
+A +L +K+ ++GL+ N TY +LING G + L+ ++K G P TY+
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372
Query: 425 SVIHEYCSDGKVSKAFEL 478
++I Y ++ A +L
Sbjct: 373 TLIAGYSKVENLAGALDL 390
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 44 DKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
D A FN+++ + + ++ +I G K L A + + E P+ V YT L
Sbjct: 350 DTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTIL 409
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
ID ++ T+KA ++ M + GL + YTY+VLI+GL G + +L++ +
Sbjct: 410 IDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHL 469
Query: 401 FPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+S Y+++IH YC +G +A L
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRL 495
Score = 63.5 bits (153), Expect = 3e-08
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N +++ N A EM E+ + ++ I+I + KA E + E
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+V Y+ LI G C G+ +A +LF +GE+ L N Y +I+G + G
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
L +M G P+ ++ S I C D K +A
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEA 527
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
N +KAC + M + +V DVY++ ++I G C +G + +A + + PN VIY
Sbjct: 417 NYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T+I G CK G + +A +L +M G+ N ++ I L R + L +M
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536
Query: 392 DGAFPDSFTYSSV 430
G P Y V
Sbjct: 537 SGLKPSVSLYKMV 549
>ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like isoform X1 [Glycine max]
Length = 556
Score = 193 bits (490), Expect = 2e-47
Identities = 90/160 (56%), Positives = 115/160 (71%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFEN 181
FNN++ LLI N +DKA FNE++ K+VLD YSFGIMIKGCC+ G K F LA E
Sbjct: 127 FNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE 186
Query: 182 LGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRND 361
G PNVVIYTTLIDGCCK G+ AK LF KM LGL N +TY+VL+NG F++GL+ +
Sbjct: 187 FGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQRE 246
Query: 362 GFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKAFELF 481
GF++YE MKR G P+++ Y+ +I EYC+ G V KAF++F
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF 286
Score = 89.7 bits (221), Expect = 4e-16
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N ++S G DKA F EMREK I V ++ I+I G C+ + +A + +
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGL--------------------- 295
+G PN+V Y LI+G C VG D A +LF ++ GL
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 296 --------------AANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYSSVI 433
A ++ TYT+LI+ R E++ M++ G PD +TYS +I
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 434 HEYCSDGKVSKAFELF 481
H C G + +A +LF
Sbjct: 446 HGLCVHGNMKEASKLF 461
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/138 (30%), Positives = 69/138 (50%)
Frame = +2
Query: 65 NEMREKIVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTLIDGCCKVG 244
N R IV + Y++ +I C G ++KAF+ A G V+ Y LI G C+
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312
Query: 245 DTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGAFPDSFTYS 424
+A +L +K+ ++GL+ N TY +LING G + L+ ++K G P TY+
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372
Query: 425 SVIHEYCSDGKVSKAFEL 478
++I Y ++ A +L
Sbjct: 373 TLIAGYSKVENLAGALDL 390
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 44 DKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIYTTL 220
D A FN+++ + + ++ +I G K L A + + E P+ V YT L
Sbjct: 350 DTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTIL 409
Query: 221 IDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKRDGA 400
ID ++ T+KA ++ M + GL + YTY+VLI+GL G + +L++ +
Sbjct: 410 IDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHL 469
Query: 401 FPDSFTYSSVIHEYCSDGKVSKAFEL 478
P+S Y+++IH YC +G +A L
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRL 495
Score = 63.5 bits (153), Expect = 3e-08
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 FNNVLSLLIVGNNYDKACSFFNEMREKIVL-DVYSFGIMIKGCCKNGELNKAFEFLAHFE 178
+N +++ N A EM E+ + ++ I+I + KA E + E
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430
Query: 179 NLGWPPNVVIYTTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRN 358
G P+V Y+ LI G C G+ +A +LF +GE+ L N Y +I+G + G
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 359 DGFELYEKMKRDGAFPDSFTYSSVIHEYCSDGKVSKA 469
L +M G P+ ++ S I C D K +A
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEA 527
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +2
Query: 35 NNYDKACSFFNEMREK-IVLDVYSFGIMIKGCCKNGELNKAFEFLAHFENLGWPPNVVIY 211
N +KAC + M + +V DVY++ ++I G C +G + +A + + PN VIY
Sbjct: 417 NYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476
Query: 212 TTLIDGCCKVGDTDKAKQLFYKMGELGLAANQYTYTVLINGLFRRGLRNDGFELYEKMKR 391
T+I G CK G + +A +L +M G+ N ++ I L R + L +M
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536
Query: 392 DGAFPDSFTYSSV 430
G P Y V
Sbjct: 537 SGLKPSVSLYKMV 549