BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00044967
         (260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...    55   1e-05
gb|AAG34875.1|AF261020_3 putative chloroplast RNA helicase VDL i...    55   1e-05
gb|AAG34874.1|AF261020_2 putative chloroplast RNA helicase VDL i...    55   1e-05

>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +3

Query: 81  FVVNCTSRTTGSLCIRMPLKASLSSSYVKTEPGNREKSIPTLRELCQGHVPDHVICRMEE 260
           F  N T RT   L  + PL AS S+S V+     ++ S  TLRELC GHVP+HVI R+EE
Sbjct: 25  FKPNYTYRTPKFLFRQKPLIASFSTSDVEARTETKDSSTATLRELCHGHVPEHVIRRVEE 84


>gb|AAG34875.1|AF261020_3 putative chloroplast RNA helicase VDL isoform 3 [Nicotiana tabacum]
           gi|11385594|gb|AAG34878.1|AF261023_1 putative
           chloroplast RNA helicase VDL isoform 3 [Nicotiana
           tabacum]
          Length = 168

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +3

Query: 81  FVVNCTSRTTGSLCIRMPLKASLSSSYVKTEPGNREKSIPTLRELCQGHVPDHVICRMEE 260
           F  N T RT   L  + PL AS S+S V+     ++ S  TLRELC GHVP+HVI R+EE
Sbjct: 25  FKPNYTYRTPKFLFRQKPLIASFSTSDVEARTETKDSSTATLRELCHGHVPEHVIRRVEE 84


>gb|AAG34874.1|AF261020_2 putative chloroplast RNA helicase VDL isoform 2 [Nicotiana tabacum]
           gi|11385592|gb|AAG34877.1|AF261022_1 putative
           chloroplast RNA helicase VDL isoform 2 [Nicotiana
           tabacum]
          Length = 132

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +3

Query: 81  FVVNCTSRTTGSLCIRMPLKASLSSSYVKTEPGNREKSIPTLRELCQGHVPDHVICRMEE 260
           F  N T RT   L  + PL AS S+S V+     ++ S  TLRELC GHVP+HVI R+EE
Sbjct: 25  FKPNYTYRTPKFLFRQKPLIASFSTSDVEARTETKDSSTATLRELCHGHVPEHVIRRVEE 84