BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00044895
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA79527.1| RNA polymerase II second largest subunit [Arabid...   141   8e-32
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A...   140   1e-31
ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Trit...   140   1e-31
gb|AAC08960.1| RNA polymerase II second largest subunit [Peperom...   140   1e-31
gb|AAC08961.1| RNA polymerase II second largest subunit [Nymphae...   140   1e-31
gb|AAB94061.1| RPB140 [Magnolia virginiana]                           140   1e-31
gb|AAC08937.1| RPB140 [Chloranthus spicatus]                          140   1e-31
emb|CAD90164.1| DNA-directed RNA polymerase II largest subunit [...   140   1e-31
emb|CAD89358.1| RNA polymerase II, second largest subunit [Vitis...   140   1e-31
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
ref|XP_002971836.1| hypothetical protein SELMODRAFT_148107 [Sela...   140   1e-31
ref|XP_002972363.1| hypothetical protein SELMODRAFT_172903 [Sela...   140   1e-31
ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [S...   140   1e-31
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo...   140   1e-31
ref|XP_001766425.1| predicted protein [Physcomitrella patens] gi...   140   1e-31
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
gb|AAW22892.1| RNA polymerase II second largest subunit [Dickson...   140   1e-31

>emb|CAA79527.1| RNA polymerase II second largest subunit [Arabidopsis thaliana]
          Length = 1188

 Score =  141 bits (356), Expect = 8e-32
 Identities = 70/79 (88%), Positives = 70/79 (88%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 719 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 778

Query: 182 QLPAGIVRN*CSFAFSCSS 238
           QLPAGI  N    A SC S
Sbjct: 779 QLPAGINAN---VAISCYS 794


>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
           brachyantha]
          Length = 1184

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 713 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 772

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 773 QLPAGI 778


>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
           gi|548863150|gb|ERN20505.1| hypothetical protein
           AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 713 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 772

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 773 QLPAGI 778


>ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
           X2 [Setaria italica]
          Length = 1190

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 719 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 778

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 779 QLPAGI 784


>ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
           X1 [Setaria italica]
          Length = 1226

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 755 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 814

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 815 QLPAGI 820


>gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Triticum urartu]
          Length = 1204

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 708 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 767

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 768 QLPAGI 773


>gb|AAC08960.1| RNA polymerase II second largest subunit [Peperomia caperata]
          Length = 554

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 208 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 267

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 268 QLPAGI 273


>gb|AAC08961.1| RNA polymerase II second largest subunit [Nymphaea odorata]
          Length = 555

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 209 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 268

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 269 QLPAGI 274


>gb|AAB94061.1| RPB140 [Magnolia virginiana]
          Length = 555

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 209 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 268

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 269 QLPAGI 274


>gb|AAC08937.1| RPB140 [Chloranthus spicatus]
          Length = 533

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 187 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 246

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 247 QLPAGI 252


>emb|CAD90164.1| DNA-directed RNA polymerase II largest subunit [Mimulus guttatus]
          Length = 348

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 203 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 262

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 263 QLPAGI 268


>emb|CAD89358.1| RNA polymerase II, second largest subunit [Vitis piasezkii]
          Length = 551

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 205 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 264

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 265 QLPAGI 270


>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Brachypodium distachyon]
          Length = 1228

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 757 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 816

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 817 QLPAGI 822


>ref|XP_002971836.1| hypothetical protein SELMODRAFT_148107 [Selaginella moellendorffii]
           gi|300160135|gb|EFJ26753.1| hypothetical protein
           SELMODRAFT_148107 [Selaginella moellendorffii]
          Length = 1178

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 706 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 765

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 766 QLPAGI 771


>ref|XP_002972363.1| hypothetical protein SELMODRAFT_172903 [Selaginella moellendorffii]
           gi|300159830|gb|EFJ26449.1| hypothetical protein
           SELMODRAFT_172903 [Selaginella moellendorffii]
          Length = 1178

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 706 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 765

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 766 QLPAGI 771


>ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor]
           gi|241920604|gb|EER93748.1| hypothetical protein
           SORBIDRAFT_01g013470 [Sorghum bicolor]
          Length = 1218

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 747 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 806

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 807 QLPAGI 812


>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
          Length = 1218

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 747 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 806

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 807 QLPAGI 812


>ref|XP_001766425.1| predicted protein [Physcomitrella patens]
           gi|162682334|gb|EDQ68753.1| predicted protein
           [Physcomitrella patens]
          Length = 1185

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 711 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 770

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 771 QLPAGI 776


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
           vinifera] gi|147841183|emb|CAN72948.1| hypothetical
           protein VITISV_033708 [Vitis vinifera]
           gi|302143287|emb|CBI21848.3| unnamed protein product
           [Vitis vinifera]
          Length = 1193

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 720 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 779

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 780 QLPAGI 785


>gb|AAW22892.1| RNA polymerase II second largest subunit [Dicksonia antarctica]
          Length = 525

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 181
           IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 186 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 245

Query: 182 QLPAGI 199
           QLPAGI
Sbjct: 246 QLPAGI 251