BLASTX nr result
ID: Rauwolfia21_contig00044616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00044616
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum] 89 6e-16
ref|XP_006363431.1| PREDICTED: glycine-rich RNA-binding protein ... 85 1e-14
dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylv... 85 1e-14
ref|XP_004233385.1| PREDICTED: uncharacterized protein LOC101249... 84 3e-14
ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261... 82 7e-14
ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuber... 82 7e-14
ref|XP_003524623.1| PREDICTED: glycine-rich RNA-binding protein ... 79 6e-13
gb|ACU17178.1| unknown [Glycine max] 79 6e-13
gb|ESW27229.1| hypothetical protein PHAVU_003G184700g [Phaseolus... 76 5e-12
emb|CBI15119.3| unnamed protein product [Vitis vinifera] 76 5e-12
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256... 76 5e-12
emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera] 75 7e-12
gb|EMJ10682.1| hypothetical protein PRUPE_ppa010113mg [Prunus pe... 75 1e-11
ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycin... 75 1e-11
ref|XP_006845838.1| hypothetical protein AMTR_s00154p00024620 [A... 74 3e-11
gb|ESW11479.1| hypothetical protein PHAVU_008G033500g [Phaseolus... 73 4e-11
ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein ... 72 8e-11
gb|ACU23248.1| unknown [Glycine max] 72 8e-11
ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein ... 71 2e-10
ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein ... 71 2e-10
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF NR+ ++LKQ+VSKH NLE+S SN S IR+M SSSK+FVGGLSYGTDE SL++
Sbjct: 1 MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSM--SSSKLFVGGLSYGTDESSLKE 58
Query: 31 AFSRYGDVIE 2
AFS+YGDVIE
Sbjct: 59 AFSQYGDVIE 68
>ref|XP_006363431.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Solanum tuberosum]
Length = 251
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEV-SSNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MA NRI NMLKQ+VS+H NLE+ +S S + IR+M SSSK+FVGGLSYGTDE SLR+
Sbjct: 1 MALFNRIGNMLKQSVSRHTNLELCASRTSLYQAIRSM--SSSKLFVGGLSYGTDETSLRE 58
Query: 31 AFSRYGDVIE 2
AFS++G VIE
Sbjct: 59 AFSQHGQVIE 68
>dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich
protein [Nicotiana tabacum]
Length = 259
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/70 (64%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEV-SSNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAFVN+I NMLKQ VS+H NLE+ +S S + IR+M SSSK+FVGGLS+GTDE SL++
Sbjct: 1 MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSM--SSSKLFVGGLSWGTDETSLKE 58
Query: 31 AFSRYGDVIE 2
AFS++G+VIE
Sbjct: 59 AFSQHGEVIE 68
>ref|XP_004233385.1| PREDICTED: uncharacterized protein LOC101249605 [Solanum
lycopersicum]
Length = 252
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEV-SSNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MA NRI NMLKQ+VS+H NLE+ ++ S + IR+M SSSK+FVGGLSYGTDE SLR+
Sbjct: 1 MALFNRIGNMLKQSVSRHTNLELCATRTSLYQAIRSM--SSSKLFVGGLSYGTDETSLRE 58
Query: 31 AFSRYGDVIE 2
AFS++G VIE
Sbjct: 59 AFSQHGQVIE 68
>ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261381 [Solanum
lycopersicum]
Length = 333
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAFVN+I N+L+ V K+ NLE+S SN S TIR+M SSSK+FVGGLSYGTDE SL++
Sbjct: 1 MAFVNKIGNILRHGVGKNANLELSASNGSLFQTIRSM--SSSKLFVGGLSYGTDESSLKE 58
Query: 31 AFSRYGDVIE 2
FS+YG+VIE
Sbjct: 59 TFSQYGEVIE 68
>ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuberosum]
gi|15822705|gb|AAL07519.1| RNA-binding protein precursor
[Solanum tuberosum]
Length = 339
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N+LK V K+ NLE+S SN S TIR+M SSSK+FVGGLSYGTDE SL++
Sbjct: 1 MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSM--SSSKLFVGGLSYGTDESSLKE 58
Query: 31 AFSRYGDVIE 2
FS+YG+VIE
Sbjct: 59 TFSQYGEVIE 68
>ref|XP_003524623.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 274
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/70 (54%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNLSFHLTIRNMASS-SSKVFVGGLSYGTDEPSLRD 32
MAF RI N+L+QT S+ V+ E+ S+ SF IR+M+S+ S+K+F+GG+SY TDE SLR+
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLRE 60
Query: 31 AFSRYGDVIE 2
AFS+YG+V++
Sbjct: 61 AFSKYGEVVD 70
>gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/70 (54%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNLSFHLTIRNMASS-SSKVFVGGLSYGTDEPSLRD 32
MAF RI N+L+QT S+ V+ E+ S+ SF IR+M+S+ S+K+F+GG+SY TDE SLR+
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLRE 60
Query: 31 AFSRYGDVIE 2
AFS+YG+V++
Sbjct: 61 AFSKYGEVVD 70
>gb|ESW27229.1| hypothetical protein PHAVU_003G184700g [Phaseolus vulgaris]
Length = 297
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/70 (52%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNLSFHLTIRNMASS-SSKVFVGGLSYGTDEPSLRD 32
MAF RI N+L+QT S+ V+ E+ S+ SF IR ++S+ SSK+F+GG+S+ TDE SLR+
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRCLSSAPSSKLFIGGVSFSTDEQSLRE 60
Query: 31 AFSRYGDVIE 2
AFS+YG+V++
Sbjct: 61 AFSKYGEVVD 70
>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF ++ N+L+QTVSK VN + S SN S + IR M SSSK+F+GGLSY TD+ SLR+
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCM--SSSKLFIGGLSYSTDDTSLRE 58
Query: 31 AFSRYGDVIE 2
AF +YG+VIE
Sbjct: 59 AFHKYGEVIE 68
>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF ++ N+L+QTVSK VN + S SN S + IR M SSSK+F+GGLSY TD+ SLR+
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCM--SSSKLFIGGLSYSTDDTSLRE 58
Query: 31 AFSRYGDVIE 2
AF +YG+VIE
Sbjct: 59 AFHKYGEVIE 68
>emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF ++ N+L+QTVSK VN + S SN S + IR M SSSK+F+GGLSY TD+ SLR+
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCM--SSSKLFIGGLSYSTDDTSLRE 58
Query: 31 AFSRYGDVIE 2
AF +YG+VIE
Sbjct: 59 AFYKYGEVIE 68
>gb|EMJ10682.1| hypothetical protein PRUPE_ppa010113mg [Prunus persica]
Length = 263
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/71 (52%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSS-NLSFHLTIRNMAS-SSSKVFVGGLSYGTDEPSLR 35
MAF+++I N+L+QT +K + E+S LS H +R M+S +SSK+F+GG+SY TDE SLR
Sbjct: 1 MAFLSKIGNILRQTANKQIRSELSPFKLSIHQAVRCMSSMASSKLFIGGISYQTDEQSLR 60
Query: 34 DAFSRYGDVIE 2
+AF++YG+VI+
Sbjct: 61 EAFAKYGEVID 71
>ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNLSFHLTIRNMASS-SSKVFVGGLSYGTDEPSLRD 32
MAF RI N+L+QT S+ V+ ++ S SF IR M+S+ S+K+F+GG+SY TDE SLR+
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSKLRSPPSFFQAIRCMSSAPSTKLFIGGVSYSTDEQSLRE 60
Query: 31 AFSRYGDVIE 2
AFS+YG+V++
Sbjct: 61 AFSKYGEVVD 70
>ref|XP_006845838.1| hypothetical protein AMTR_s00154p00024620 [Amborella trichopoda]
gi|548848482|gb|ERN07513.1| hypothetical protein
AMTR_s00154p00024620 [Amborella trichopoda]
Length = 322
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRDA 29
MAF +R+ ++++QTV+K++ SSN S IR+M SSSK+FVGGLSYGTD+ SLR+A
Sbjct: 1 MAFASRVGSLVRQTVNKNIG---SSNPSIFQAIRSM--SSSKLFVGGLSYGTDDGSLREA 55
Query: 28 FSRYGDVIE 2
F+ YG+VIE
Sbjct: 56 FASYGEVIE 64
>gb|ESW11479.1| hypothetical protein PHAVU_008G033500g [Phaseolus vulgaris]
Length = 235
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N+LK + KH+N + S S+ S IR+M SS+K+FVGG+SY TD+ SLR+
Sbjct: 1 MAFLNKIGNLLKSSAVKHMNQDFSVSSPSLFQAIRSM--SSAKIFVGGISYSTDDMSLRE 58
Query: 31 AFSRYGDVIE 2
AF+RYG+V++
Sbjct: 59 AFARYGEVLD 68
>ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 244
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/70 (51%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNL-SFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N+LK + KH+N + S++ S IR+M SS+K+FVGG+SY TD+ SLR+
Sbjct: 1 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSM--SSAKLFVGGISYSTDDMSLRE 58
Query: 31 AFSRYGDVIE 2
+F+RYG+VI+
Sbjct: 59 SFARYGEVID 68
>gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/70 (51%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVSSNL-SFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N+LK + KH+N + S++ S IR+M SS+K+FVGG+SY TD+ SLR+
Sbjct: 1 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSM--SSAKLFVGGISYSTDDMSLRE 58
Query: 31 AFSRYGDVIE 2
+F+RYG+VI+
Sbjct: 59 SFARYGEVID 68
>ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Glycine max]
gi|571472960|ref|XP_006585776.1| PREDICTED: glycine-rich
RNA-binding protein 3, mitochondrial-like isoform X3
[Glycine max] gi|571472962|ref|XP_006585777.1|
PREDICTED: glycine-rich RNA-binding protein 3,
mitochondrial-like isoform X4 [Glycine max]
Length = 249
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N++K + KH+N + S S S IR+M SS+K+FVGG+SY TD+ SLR+
Sbjct: 5 MAFLNKIGNLVKNSAVKHINQDFSVSTPSLFQAIRSM--SSAKLFVGGISYSTDDMSLRE 62
Query: 31 AFSRYGDVIE 2
+F+RYG+VI+
Sbjct: 63 SFARYGEVID 72
>ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Glycine max]
Length = 245
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -1
Query: 208 MAFVNRISNMLKQTVSKHVNLEVS-SNLSFHLTIRNMASSSSKVFVGGLSYGTDEPSLRD 32
MAF+N+I N++K + KH+N + S S S IR+M SS+K+FVGG+SY TD+ SLR+
Sbjct: 1 MAFLNKIGNLVKNSAVKHINQDFSVSTPSLFQAIRSM--SSAKLFVGGISYSTDDMSLRE 58
Query: 31 AFSRYGDVIE 2
+F+RYG+VI+
Sbjct: 59 SFARYGEVID 68