BLASTX nr result
ID: Rauwolfia21_contig00044607
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00044607
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006589935.1| PREDICTED: uncharacterized protein LOC102669... 59 7e-07
emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera] 59 7e-07
ref|XP_006605028.1| PREDICTED: putative ribonuclease H protein A... 58 1e-06
gb|EOY25852.1| Non-LTR retroelement reverse transcriptase [Theob... 58 1e-06
ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein A... 57 2e-06
ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein A... 56 6e-06
ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein A... 56 6e-06
ref|XP_006606919.1| PREDICTED: putative ribonuclease H protein A... 55 7e-06
ref|XP_006595368.1| PREDICTED: putative ribonuclease H protein A... 55 1e-05
emb|CAN65018.1| hypothetical protein VITISV_018014 [Vitis vinifera] 55 1e-05
>ref|XP_006589935.1| PREDICTED: uncharacterized protein LOC102669781 [Glycine max]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLALC-WRLIS*PDQLWAQVLLKKFGSPFARQN* 124
V W T+CLSK GG+GIKDL NQALL W+L + QLWA+ LL K+G A
Sbjct: 184 VKWDTVCLSKIRGGLGIKDLNKFNQALLGKWGWQLANNQHQLWARTLLSKYGGWHALL-- 241
Query: 123 NGRTSHYMGPKP*KLKLLFMQ 61
GR+S + P LK +F Q
Sbjct: 242 YGRSSADISPWWKDLKSVFEQ 262
>emb|CAN64017.1| hypothetical protein VITISV_031525 [Vitis vinifera]
Length = 1355
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLA-LCWRLIS*PDQLWAQVLLKKFGSPFARQ-N 127
V W +C+ K GG+GI++L +N+ALL CWR S D LW QV+++KFG R +
Sbjct: 1117 VNWSIVCIEKKDGGLGIRNLSRLNKALLGKWCWRFASEQDSLWKQVIVRKFGEEDGRWCS 1176
Query: 126 *NGRTSHYMG 97
+ R SH +G
Sbjct: 1177 GDSRESHGVG 1186
>ref|XP_006605028.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 174
Score = 57.8 bits (138), Expect = 1e-06
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLALC-WRLIS*PDQLWAQVLLKKFGSPFARQN* 124
V W T+CL K GG+GIKDL N+ALL W+L + P QLWA+ L+ K+G A
Sbjct: 96 VKWDTVCLPKVRGGLGIKDLNKFNEALLGKWGWQLANNPHQLWARTLVSKYGGWHALL-- 153
Query: 123 NGRTSHYMGPKP*KLKLLFMQ 61
GR S + P LK +F Q
Sbjct: 154 YGRGSADISPWWKDLKSIFQQ 174
>gb|EOY25852.1| Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 1011
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -2
Query: 294 WGTICLSKS*GGVGIKDLKLMNQA-LLALCWRLIS*PDQLWAQVLLKKF 151
W T+C K+ GG+GI+ L LMN A +L LCW L+S PD LW +VL+ K+
Sbjct: 550 WNTLCKPKAQGGMGIRRLSLMNDAFILILCWGLLSKPDALWVRVLVNKY 598
>ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 744
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLALC-WRLIS*PDQLWAQVLLKKFG 148
V W T+CL KS GG+GIKDL N+ALL W L + +QLWA+VLL K+G
Sbjct: 365 VNWDTVCLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWARVLLSKYG 416
>ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 360
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALL-ALCWRLIS*PDQLWAQVLLKKFG 148
V W TIC K GG+G+K L LMN ALL + W LI+ P+ LW +VLL K+G
Sbjct: 87 VKWDTICQLKPSGGLGLKQLNLMNDALLMKIGWVLIASPNSLWVKVLLSKYG 138
>ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 569
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQAL-LALCWRLIS*PDQLWAQVLLKKFG 148
++W IC KS GG+G K L +MN+AL + L W LIS P+ W QVL+ K+G
Sbjct: 2 ISWKEICKPKSAGGLGFKSLAMMNRALHMKLAWGLISSPNSFWVQVLVSKYG 53
>ref|XP_006606919.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 274
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLALC-WRLIS*PDQLWAQVLLKKFGSPFARQN* 124
V W T+CLSK+ GG+GIKDL N+ALL W++ + P QLWA+ L+ +G A
Sbjct: 40 VKWDTVCLSKARGGLGIKDLNKFNEALLGKWGWQVANNPHQLWARTLVSIYGGWQALL-- 97
Query: 123 NGRTSHYMGPKP*KLKLLFMQ 61
+GR S P LK +F Q
Sbjct: 98 HGRGSVDNSPWWKDLKSIFQQ 118
>ref|XP_006595368.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 420
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -2
Query: 300 VAWGTICLSKS*GGVGIKDLKLMNQALLALC-WRLIS*PDQLWAQVLLKKFG 148
V W +CL KS GG+GIKDL N ALL W L++ QLWA++LL K+G
Sbjct: 41 VKWDIVCLPKSRGGLGIKDLNKFNVALLGKWGWNLVNNQHQLWARILLSKYG 92
>emb|CAN65018.1| hypothetical protein VITISV_018014 [Vitis vinifera]
Length = 805
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -2
Query: 342 GGVGIKDLKLMNQAVAWGTICLSKS*GGVGIKDLKLMNQAL-LALCWRLIS*PDQLWAQV 166
GGV L+N W +C+ K GG+GI++L +N+AL CWR S + LW QV
Sbjct: 691 GGVSQSKSHLVN----WSIVCMEKKDGGLGIRNLSRLNKALPRKWCWRFASEQESLWKQV 746
Query: 165 LLKKFGSPFARQ-N*NGRTSHYMG 97
+++KFG + N R SH +G
Sbjct: 747 IVRKFGEEDGGWCSGNSRESHGVG 770