BLASTX nr result
ID: Rauwolfia21_contig00042991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00042991
(435 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 157 1e-36
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 127 1e-27
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 127 1e-27
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 127 2e-27
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 125 6e-27
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 124 2e-26
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 123 3e-26
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 121 8e-26
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 116 3e-24
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 114 1e-23
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 113 2e-23
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] 107 2e-21
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 106 3e-21
gb|AAK29467.1| polyprotein-like [Solanum chilense] 103 2e-20
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera] 100 3e-19
emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] 100 3e-19
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 100 3e-19
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 99 8e-19
emb|CAN70420.1| hypothetical protein VITISV_033745 [Vitis vinifera] 99 8e-19
emb|CAN82257.1| hypothetical protein VITISV_033475 [Vitis vinifera] 98 1e-18
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 157 bits (397), Expect = 1e-36
Identities = 73/101 (72%), Positives = 82/101 (81%)
Frame = +1
Query: 130 HPVSLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQD 309
H +PLQYKAPEK+W GRDI YD L VF CKAY HV KD+ SKLDVK R+CVFIGYGQD
Sbjct: 620 HSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIGYGQD 679
Query: 310 FLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRKSNEDS 432
LGY+FYD V KKL+R+ DVVF+EDQTI DIDKV KS +DS
Sbjct: 680 MLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDS 720
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 127 bits (320), Expect = 1e-27
Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL++ P+++WS +I YDHL VF CKA+ H+ KD+ SKLD K R
Sbjct: 494 LNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRP 553
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDK 408
CVFIGYGQD LGYRFYD V KKL+R+ DVVF+ED TI DI+K
Sbjct: 554 CVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEK 595
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 127 bits (320), Expect = 1e-27
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = +1
Query: 142 LPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGY 321
+PL++ P+++WS +I YDHL VF CKA+ H+ KD+ SKLD K R CVFIGYGQD LGY
Sbjct: 604 VPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGY 663
Query: 322 RFYDMVHKKLLRN*DVVFIEDQTIADIDK 408
+FYD+V KKL R+ DVVF+ED TI DI+K
Sbjct: 664 KFYDLVQKKLXRSXDVVFMEDHTIQDIEK 692
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 127 bits (318), Expect = 2e-27
Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL++ +++WS +I YDHL VF CKA+ H+ KD+ SKLDVK R
Sbjct: 562 LNTVVHVLNLTPCVPLEFDVSDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDVKTRP 621
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDK 408
CVFIGYGQD LGYRFYD V KKL+R+ DVVF+ED TI DI+K
Sbjct: 622 CVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEK 663
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 125 bits (314), Expect = 6e-27
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
Frame = +1
Query: 115 IHRTIHPVSLP----LQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
+ +H ++L L+ + P+KVW G+D+ YDHL VF CKA+ HV +D+ SKLD K RQ
Sbjct: 609 VSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQ 668
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRK 417
C+FIGYG D GYR YD V KKL+R+ DVVF E+QTI DIDKV++
Sbjct: 669 CIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQ 713
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 124 bits (310), Expect = 2e-26
Identities = 54/89 (60%), Positives = 69/89 (77%)
Frame = +1
Query: 142 LPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGY 321
+PL++ P+++WS +I YDHL VF CKA+ H+ KD+ SKLD K R CVFIGYG D LGY
Sbjct: 378 VPLEFDVPDRIWSNNEICYDHLRVFGCKAFVHIPKDEISKLDAKTRPCVFIGYGHDELGY 437
Query: 322 RFYDMVHKKLLRN*DVVFIEDQTIADIDK 408
RFYD + KKL+R+ DVVF+ED TI DI+K
Sbjct: 438 RFYDPMQKKLVRSRDVVFMEDHTIQDIEK 466
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 123 bits (308), Expect = 3e-26
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL++ P+++WS +I YD+L VF CKA+ H+ KD SKLD K R
Sbjct: 401 LNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDYLRVFGCKAFVHIPKDKRSKLDAKTRP 460
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDK 408
CVFIGYGQD LGYRFYD V KKL+R+ D +F+ED TI DI+K
Sbjct: 461 CVFIGYGQDELGYRFYDQVQKKLVRSRDAMFMEDHTIQDIEK 502
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 121 bits (304), Expect = 8e-26
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +1
Query: 148 LQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGYRF 327
L++ P+K+WS +I YDHL VF CKA+ H+SKD+ SKLD K R CVFIGYGQD LGYRF
Sbjct: 608 LEFDVPDKMWSDNEISYDHLXVFGCKAFVHISKDERSKLDAKTRPCVFIGYGQDELGYRF 667
Query: 328 YDMVHKKLLRN*DVVFIEDQTIADIDK 408
YD V KKL+R+ D +F+E TI DI+K
Sbjct: 668 YDPVQKKLVRSRDAMFMEXHTIQDIEK 694
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 116 bits (291), Expect = 3e-24
Identities = 54/109 (49%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL++ +++WS +IFYDHL VF KA+ H+ KD+ KLD K R
Sbjct: 191 LNTVVHVLNLTPCVPLEFDVLDRIWSNNEIFYDHLRVFGYKAFVHILKDERFKLDAKTRL 250
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRKSNED 429
CVFIGYGQ+ LGYRFYD V KKL+R+ D +F+ED TI DI+K ++ D
Sbjct: 251 CVFIGYGQNELGYRFYDPVQKKLVRSRDAMFMEDHTIQDIEKTDEAMGD 299
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 114 bits (286), Expect = 1e-23
Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL+ +++WS +I YD+L VF CK + H+ KD+ SKLD K R
Sbjct: 385 LNTVVHVLNLTPCVPLEIDVLDRIWSNNEISYDYLRVFGCKTFVHIPKDERSKLDAKTRP 444
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRKSNE 426
CVFIGYGQD LGYRFYD + KKL+ + D +F+ED TI DI+K+ +E
Sbjct: 445 CVFIGYGQDELGYRFYDPMQKKLVGSRDAMFMEDHTIQDIEKIDVEDE 492
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 113 bits (283), Expect = 2e-23
Identities = 51/86 (59%), Positives = 63/86 (73%)
Frame = +1
Query: 151 QYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGYRFY 330
++ P+++WS +I YDHL VF CKA+ H+ K + SKLD K R CVFIGY QD LGYRFY
Sbjct: 517 EFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKYERSKLDAKTRPCVFIGYDQDELGYRFY 576
Query: 331 DMVHKKLLRN*DVVFIEDQTIADIDK 408
D V KKL+R+ DVV +ED TI DI K
Sbjct: 577 DPVQKKLVRSRDVVXMEDHTIQDIXK 602
>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 107 bits (266), Expect = 2e-21
Identities = 45/87 (51%), Positives = 64/87 (73%)
Frame = +1
Query: 142 LPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGY 321
+PL+ E+VW G+DI Y+HL VF CKA+ H+ KD+ SKLD K + C+F+GYG + GY
Sbjct: 353 VPLKGDVQERVWRGKDISYNHLRVFGCKAFVHIPKDERSKLDNKAKACIFLGYGHEEFGY 412
Query: 322 RFYDMVHKKLLRN*DVVFIEDQTIADI 402
R +D V+KK++R+ DVVF+EDQ D+
Sbjct: 413 RLWDPVNKKIIRSRDVVFLEDQLFDDV 439
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 106 bits (265), Expect = 3e-21
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = +1
Query: 115 IHRTIHPVSL----PLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQ 282
++ +H ++L PL++ P+++WS +I YDHL VF CKA+ H+ KD+ SKLD K R
Sbjct: 478 LNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRP 537
Query: 283 CVFIGYGQDFLGYRFYDMVHKKLLRN 360
CVFIGYGQD LGYRFYD V KKL+ +
Sbjct: 538 CVFIGYGQDELGYRFYDSVQKKLVED 563
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 103 bits (257), Expect = 2e-20
Identities = 50/112 (44%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Frame = +1
Query: 97 KTGFLMIHRTIHPVSLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKI 276
+T +I+R+ S+PL++ PE+VW+ +++ Y HL VF CKA+AHV K+ +KLD K
Sbjct: 616 RTACYLINRS---PSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTKLDDKS 672
Query: 277 RQCVFIGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQ--TIADI-DKVRKSN 423
C+FIGYG + GYR +D+V KK++R+ DV+F E + T AD+ +K +K N
Sbjct: 673 VPCIFIGYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKN 724
>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
Length = 1144
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Frame = +1
Query: 142 LPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLGY 321
+PL++ P+++ SG +I YDHL VF CKA+ H+ KD+ SKL+ K R CVFIGYGQD LGY
Sbjct: 548 VPLEFDDPDRILSGNEISYDHLYVFGCKAFVHILKDERSKLNAKTRPCVFIGYGQDELGY 607
Query: 322 RFYDMVHKKL-LRN*DVV-FIEDQTIADIDKV 411
RFYD V KKL + D + F + D+D V
Sbjct: 608 RFYDPVQKKLDIEKTDAIEFQYSDNLIDLDPV 639
>emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]
Length = 458
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/94 (46%), Positives = 66/94 (70%)
Frame = +1
Query: 139 SLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLG 318
S PL E+VW+ + + ++HL VF C+A+ HV +D +SKLD K +QC+F+GY + G
Sbjct: 307 SYPLVGGILERVWTRKFVSFEHLRVFGCRAFVHVLRDKQSKLDSKTKQCIFLGYSNEEFG 366
Query: 319 YRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRKS 420
YR +D KK++R+ VVF +DQTI D+D+V+KS
Sbjct: 367 YRLWDPATKKIIRSRYVVFFKDQTIEDLDRVKKS 400
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/93 (47%), Positives = 63/93 (67%)
Frame = +1
Query: 139 SLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLG 318
S L+ PE+VW G+ + ++HL VF C A+ HV +D SKLD K + C+F+GY + G
Sbjct: 418 SYTLKGDIPERVWIGKFVSFEHLRVFXCWAFVHVPRDKXSKLDSKTKSCIFLGYSNEEFG 477
Query: 319 YRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRK 417
YR +D+ KK++R+ DVV EDQTI D+D V+K
Sbjct: 478 YRLWDLATKKIIRSRDVVIFEDQTIEDLDWVKK 510
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/96 (46%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 139 SLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDFLG 318
S+PL ++ PE+VW+ +++ Y HL VF C+A+AHV K+ +KLD K C+FIGYG + G
Sbjct: 626 SVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFG 685
Query: 319 YRFYDMVHKKLLRN*DVVFIEDQ--TIADIDKVRKS 420
YR +D V KK++R+ DVVF E + T AD+ + K+
Sbjct: 686 YRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKN 721
>emb|CAN70420.1| hypothetical protein VITISV_033745 [Vitis vinifera]
Length = 151
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/95 (45%), Positives = 65/95 (68%)
Frame = +1
Query: 133 PVSLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVFIGYGQDF 312
P S L+ PE+VW+ ++HL VF C+A+ +V +D+ SKLD K +QC+F+GY +
Sbjct: 51 PPSYSLEGDIPERVWTRNFFSFEHLRVFGCRAFVYVPRDERSKLDSKTKQCIFLGYSNEE 110
Query: 313 LGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRK 417
GY+ +D+ KK++ DVVF EDQTI D+D+V+K
Sbjct: 111 FGYKLWDLTTKKIISR-DVVFFEDQTIEDLDQVKK 144
>emb|CAN82257.1| hypothetical protein VITISV_033475 [Vitis vinifera]
Length = 197
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/107 (42%), Positives = 63/107 (58%)
Frame = +1
Query: 112 MIHRTIHPVSLPLQYKAPEKVWSGRDIFYDHLSVFSCKAYAHVSKDDESKLDVKIRQCVF 291
M H I V PL ++ +K W G D+ Y HL VF CK + HV K+ S LD KI +F
Sbjct: 54 MNHTIIERVRCPLNFEVLKKAWIGEDVSYSHLRVFGCKTFVHVPKEQRSTLDNKIVPHIF 113
Query: 292 IGYGQDFLGYRFYDMVHKKLLRN*DVVFIEDQTIADIDKVRKSNEDS 432
GYG + G+R +D+ KL+R+ D+VF +DQT+ D DK +S S
Sbjct: 114 FGYGDEEFGFRLWDLTKMKLVRSRDMVFHKDQTLGDFDKPNQSKGTS 160