BLASTX nr result
ID: Rauwolfia21_contig00042846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00042846
(349 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li... 43 3e-11
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 43 4e-11
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 40 9e-11
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 43 3e-10
gb|EMJ27243.1| hypothetical protein PRUPE_ppa010602mg [Prunus pe... 40 3e-10
ref|NP_001148581.1| replication factor C subunit 2 [Zea mays] gi... 40 3e-10
gb|ACF84478.1| unknown [Zea mays] gi|194706416|gb|ACF87292.1| un... 40 3e-10
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li... 40 4e-10
ref|XP_006472823.1| PREDICTED: replication factor C subunit 4-li... 40 4e-10
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is... 40 7e-10
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 40 7e-10
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V... 40 7e-10
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is... 40 7e-10
gb|AAD41422.1|AC007727_11 Similar to gb|M87339 replication facto... 40 7e-10
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S... 40 9e-10
ref|XP_006304390.1| hypothetical protein CARUB_v10010906mg [Caps... 40 1e-09
ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutr... 40 2e-09
ref|NP_001185061.1| replication factor C subunit 4 [Arabidopsis ... 40 2e-09
ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis tha... 40 2e-09
ref|NP_001185060.1| replication factor C subunit 4 [Arabidopsis ... 40 2e-09
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
lycopersicum]
Length = 339
Score = 43.1 bits (100), Expect(3) = 3e-11
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPLPE
Sbjct: 157 IIEPLASRCAKFRFKPLPE 175
Score = 35.8 bits (81), Expect(3) = 3e-11
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 197 ALSTLSSISQGDLRRAITYLQ 217
Score = 33.9 bits (76), Expect(3) = 3e-11
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+M +ILHIC+EEGLNL+SE
Sbjct: 177 IMGSRILHICKEEGLNLDSE 196
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 43.1 bits (100), Expect(3) = 4e-11
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPLPE
Sbjct: 157 IIEPLASRCAKFRFKPLPE 175
Score = 35.8 bits (81), Expect(3) = 4e-11
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 197 ALSTLSSISQGDLRRAITYLQ 217
Score = 33.5 bits (75), Expect(3) = 4e-11
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+M +ILHIC+EEGLNL+SE
Sbjct: 177 VMGSRILHICKEEGLNLDSE 196
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 40.0 bits (92), Expect(3) = 9e-11
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 37.4 bits (85), Expect(3) = 9e-11
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS++ QGDL+RAITYLQ
Sbjct: 198 ALSTLSYVSQGDLRRAITYLQ 218
Score = 33.9 bits (76), Expect(3) = 9e-11
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS ++LHIC+EEGLNL++E
Sbjct: 178 IMSSRVLHICREEGLNLDAE 197
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 43.1 bits (100), Expect(3) = 3e-10
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPLPE
Sbjct: 158 IIEPLASRCAKFRFKPLPE 176
Score = 35.4 bits (80), Expect(3) = 3e-10
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS + QGDL+RAITYLQ
Sbjct: 198 ALSTLSSVSQGDLRRAITYLQ 218
Score = 31.2 bits (69), Expect(3) = 3e-10
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC EEGL L++E
Sbjct: 178 IMSNRILHICNEEGLTLDTE 197
>gb|EMJ27243.1| hypothetical protein PRUPE_ppa010602mg [Prunus persica]
Length = 243
Score = 40.0 bits (92), Expect(3) = 3e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 3e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 116 LSTLSFILQGDLQRAITYLQV 54
LSTLS I QGDL+RAITYLQV
Sbjct: 199 LSTLSSISQGDLRRAITYLQV 219
Score = 33.9 bits (76), Expect(3) = 3e-10
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSEV 224
+M ++LHICQEEGLNL+ EV
Sbjct: 178 IMISRVLHICQEEGLNLDPEV 198
>ref|NP_001148581.1| replication factor C subunit 2 [Zea mays]
gi|195620566|gb|ACG32113.1| replication factor C subunit
2 [Zea mays]
Length = 339
Score = 40.0 bits (92), Expect(3) = 3e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 157 IIEPLASRCAKFRFKPLSE 175
Score = 35.8 bits (81), Expect(3) = 3e-10
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 122 RALSTLSFILQGDLQRAITYLQ 57
+A+STLS I QGDL+RAITYLQ
Sbjct: 196 QAMSTLSVISQGDLRRAITYLQ 217
Score = 33.5 bits (75), Expect(3) = 3e-10
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +I+HIC EEGLNLN++
Sbjct: 177 VMSSRIMHICNEEGLNLNAQ 196
>gb|ACF84478.1| unknown [Zea mays] gi|194706416|gb|ACF87292.1| unknown [Zea mays]
gi|413916289|gb|AFW56221.1| replication factor C subunit
2 [Zea mays]
Length = 339
Score = 40.0 bits (92), Expect(3) = 3e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 157 IIEPLASRCAKFRFKPLSE 175
Score = 35.8 bits (81), Expect(3) = 3e-10
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 122 RALSTLSFILQGDLQRAITYLQ 57
+A+STLS I QGDL+RAITYLQ
Sbjct: 196 QAMSTLSVISQGDLRRAITYLQ 217
Score = 33.5 bits (75), Expect(3) = 3e-10
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +I+HIC EEGLNLN++
Sbjct: 177 VMSSRIMHICNEEGLNLNAQ 196
>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
sinensis]
Length = 342
Score = 40.0 bits (92), Expect(3) = 4e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 4e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 33.1 bits (74), Expect(3) = 4e-10
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS ++LHIC EEGLNL++E
Sbjct: 178 VMSSRVLHICNEEGLNLDAE 197
>ref|XP_006472823.1| PREDICTED: replication factor C subunit 4-like isoform X2 [Citrus
sinensis]
Length = 324
Score = 40.0 bits (92), Expect(3) = 4e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 4e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 33.1 bits (74), Expect(3) = 4e-10
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS ++LHIC EEGLNL++E
Sbjct: 178 VMSSRVLHICNEEGLNLDAE 197
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
product [Vitis vinifera]
Length = 341
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 7e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 32.3 bits (72), Expect(3) = 7e-10
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC+EE LNL+SE
Sbjct: 178 IMSSRILHICKEEELNLDSE 197
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 7e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 32.3 bits (72), Expect(3) = 7e-10
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC+EE LNL+SE
Sbjct: 178 IMSSRILHICKEEELNLDSE 197
>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
Length = 334
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 151 IIEPLASRCAKFRFKPLSE 169
Score = 35.8 bits (81), Expect(3) = 7e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 191 ALSTLSSISQGDLRRAITYLQ 211
Score = 32.3 bits (72), Expect(3) = 7e-10
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC+EE LNL+SE
Sbjct: 171 IMSSRILHICKEEELNLDSE 190
>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
vinifera]
Length = 329
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 146 IIEPLASRCAKFRFKPLSE 164
Score = 35.8 bits (81), Expect(3) = 7e-10
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 186 ALSTLSSISQGDLRRAITYLQ 206
Score = 32.3 bits (72), Expect(3) = 7e-10
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC+EE LNL+SE
Sbjct: 166 IMSSRILHICKEEELNLDSE 185
>gb|AAD41422.1|AC007727_11 Similar to gb|M87339 replication factor C, 37-kDa subunit from Homo
sapiens and is a member of PF|00004 ATPases associated
with various cellular activities [Arabidopsis thaliana]
Length = 319
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 37.4 bits (85), Expect(3) = 7e-10
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQV 54
ALSTLS I QGDL+RAITYLQV
Sbjct: 198 ALSTLSSISQGDLRRAITYLQV 219
Score = 30.8 bits (68), Expect(3) = 7e-10
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC EEGL+L+ E
Sbjct: 178 VMSNRILHICNEEGLSLDGE 197
>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
gi|241922268|gb|EER95412.1| hypothetical protein
SORBIDRAFT_01g045530 [Sorghum bicolor]
Length = 339
Score = 40.0 bits (92), Expect(3) = 9e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 157 IIEPLASRCAKFRFKPLSE 175
Score = 36.2 bits (82), Expect(3) = 9e-10
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3
Query: 122 RALSTLSFILQGDLQRAITYLQ 57
+ALSTLS I QGDL+RAITYLQ
Sbjct: 196 QALSTLSAISQGDLRRAITYLQ 217
Score = 31.6 bits (70), Expect(3) = 9e-10
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +I+HIC EEGLNL+++
Sbjct: 177 VMSSRIMHICNEEGLNLDAQ 196
>ref|XP_006304390.1| hypothetical protein CARUB_v10010906mg [Capsella rubella]
gi|482573101|gb|EOA37288.1| hypothetical protein
CARUB_v10010906mg [Capsella rubella]
Length = 295
Score = 40.0 bits (92), Expect(3) = 1e-09
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 156 IIEPLASRCAKFRFKPLSE 174
Score = 35.8 bits (81), Expect(3) = 1e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 196 ALSTLSSISQGDLRRAITYLQ 216
Score = 31.6 bits (70), Expect(3) = 1e-09
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+M+ +ILHIC EEGLNL E
Sbjct: 176 IMTHRILHICNEEGLNLGGE 195
>ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
gi|557094047|gb|ESQ34629.1| hypothetical protein
EUTSA_v10008129mg [Eutrema salsugineum]
Length = 339
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 2e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 31.2 bits (69), Expect(3) = 2e-09
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+M+ +ILHIC EEGLNL E
Sbjct: 178 VMTNRILHICNEEGLNLGGE 197
>ref|NP_001185061.1| replication factor C subunit 4 [Arabidopsis thaliana]
gi|332192021|gb|AEE30142.1| protein embryo defective
1968 [Arabidopsis thaliana]
Length = 341
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 2e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC EEGL+L+ E
Sbjct: 178 VMSNRILHICNEEGLSLDGE 197
>ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis thaliana]
gi|75163839|sp|Q93ZX1.1|RFC4_ARATH RecName:
Full=Replication factor C subunit 4; Short=AtRFC4;
AltName: Full=Activator 1 subunit 4; AltName:
Full=Protein EMBRYO DEFECTIVE 1968
gi|15810343|gb|AAL07059.1| putative replication factor
[Arabidopsis thaliana] gi|17065122|gb|AAL32715.1|
Similar replication factor C, 37-kDa subunit
[Arabidopsis thaliana] gi|21536935|gb|AAM61276.1|
putative replication factor [Arabidopsis thaliana]
gi|34098857|gb|AAQ56811.1| At1g21690 [Arabidopsis
thaliana] gi|332192018|gb|AEE30139.1| protein embryo
defective 1968 [Arabidopsis thaliana]
Length = 339
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 158 IIEPLASRCAKFRFKPLSE 176
Score = 35.8 bits (81), Expect(3) = 2e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 198 ALSTLSSISQGDLRRAITYLQ 218
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC EEGL+L+ E
Sbjct: 178 VMSNRILHICNEEGLSLDGE 197
>ref|NP_001185060.1| replication factor C subunit 4 [Arabidopsis thaliana]
gi|332192020|gb|AEE30141.1| protein embryo defective
1968 [Arabidopsis thaliana]
Length = 332
Score = 40.0 bits (92), Expect(3) = 2e-09
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 348 IIEPLASRCAKFRFKPLPE 292
IIEPLASRCAKFRFKPL E
Sbjct: 151 IIEPLASRCAKFRFKPLSE 169
Score = 35.8 bits (81), Expect(3) = 2e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 119 ALSTLSFILQGDLQRAITYLQ 57
ALSTLS I QGDL+RAITYLQ
Sbjct: 191 ALSTLSSISQGDLRRAITYLQ 211
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 286 LMSIQILHICQEEGLNLNSE 227
+MS +ILHIC EEGL+L+ E
Sbjct: 171 VMSNRILHICNEEGLSLDGE 190