BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00042801
         (254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGM15017.1| RNA polymerase beta'' subunit (chloroplast) [Pana...    62   1e-07
ref|YP_008815194.1| RNA polymerase beta' subunit (chloroplast) [...    62   1e-07
ref|YP_008815107.1| RNA polymerase beta' subunit (chloroplast) [...    62   1e-07
ref|YP_008815020.1| RNA polymerase beta' subunit (chloroplast) [...    62   1e-07
ref|YP_008814933.1| RNA polymerase beta' subunit (chloroplast) [...    62   1e-07
ref|YP_008814846.1| RNA polymerase beta' subunit (chloroplast) [...    62   1e-07
sp|Q68S16.1|RPOC2_PANGI RecName: Full=DNA-directed RNA polymeras...    62   1e-07
ref|YP_004935542.1| RNA polymerase beta'' subunit (chloroplast) ...    62   1e-07
ref|YP_086956.2| RNA polymerase beta'' subunit [Panax ginseng]         62   1e-07
gb|ABD93726.1| RNA polymerase beta chain [Ranunculus sp. Qiu 95024]    62   1e-07
gb|ABD93760.1| RNA polymerase beta chain [Hedera helix]                62   1e-07
sp|Q6EW58.1|RPOC2_NYMAL RecName: Full=DNA-directed RNA polymeras...    61   2e-07
gb|ADX99115.1| RNA polymerase beta II subunit [Diostea juncea]         61   2e-07
gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani]     61   2e-07
gb|ADX99113.1| RNA polymerase beta II subunit [Neosparton ephedr...    61   2e-07
gb|ADX99112.1| RNA polymerase beta II subunit [Dipyrena glaberrima]    61   2e-07
gb|ADX99109.1| RNA polymerase beta II subunit [Aloysia citrodora]      61   2e-07
gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovati...    61   2e-07
gb|ADX99105.1| RNA polymerase beta II subunit [Phyla lanceolata]       61   2e-07
gb|ADX99104.1| RNA polymerase beta II subunit [Lippia integrifolia]    61   2e-07

>gb|AGM15017.1| RNA polymerase beta'' subunit (chloroplast) [Panax ginseng]
           gi|506444543|gb|AGM15103.1| RNA polymerase beta''
           subunit (chloroplast) [Panax ginseng]
           gi|506444659|gb|AGM15189.1| RNA polymerase beta''
           subunit (chloroplast) [Panax ginseng]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_008815194.1| RNA polymerase beta' subunit (chloroplast) [Kalopanax septemlobus]
           gi|458599602|gb|AGG39294.1| RNA polymerase beta' subunit
           (chloroplast) [Kalopanax septemlobus]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_008815107.1| RNA polymerase beta' subunit (chloroplast) [Schefflera delavayi]
           gi|458599514|gb|AGG39207.1| RNA polymerase beta' subunit
           (chloroplast) [Schefflera delavayi]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_008815020.1| RNA polymerase beta' subunit (chloroplast) [Metapanax delavayi]
           gi|458599361|gb|AGG39120.1| RNA polymerase beta' subunit
           (chloroplast) [Metapanax delavayi]
          Length = 1384

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_008814933.1| RNA polymerase beta' subunit (chloroplast) [Brassaiopsis hainla]
           gi|458599182|gb|AGG39033.1| RNA polymerase beta' subunit
           (chloroplast) [Brassaiopsis hainla]
          Length = 1398

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 678 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 708


>ref|YP_008814846.1| RNA polymerase beta' subunit (chloroplast) [Aralia undulata]
           gi|458599080|gb|AGG38946.1| RNA polymerase beta' subunit
           (chloroplast) [Aralia undulata]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>sp|Q68S16.1|RPOC2_PANGI RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta''; Short=RNA polymerase subunit beta''
           gi|51235303|gb|AAT98499.1| RNA polymerase beta II
           subunit [Panax ginseng]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_004935542.1| RNA polymerase beta'' subunit (chloroplast) [Eleutherococcus
           senticosus] gi|347448196|gb|AEO92608.1| RNA polymerase
           beta'' subunit (chloroplast) [Eleutherococcus
           senticosus]
          Length = 1387

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 667 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 697


>ref|YP_086956.2| RNA polymerase beta'' subunit [Panax ginseng]
          Length = 1383

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 663 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 693


>gb|ABD93726.1| RNA polymerase beta chain [Ranunculus sp. Qiu 95024]
          Length = 862

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITF 194
           IPEEVHILPGSSSIM+RNNSIIGVDTQITF
Sbjct: 221 IPEEVHILPGSSSIMIRNNSIIGVDTQITF 250


>gb|ABD93760.1| RNA polymerase beta chain [Hedera helix]
          Length = 863

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNSIIGVDTQIT T
Sbjct: 218 IPEEVHILPGSSSIMVRNNSIIGVDTQITLT 248


>sp|Q6EW58.1|RPOC2_NYMAL RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta''; Short=RNA polymerase subunit beta''
           gi|50250317|emb|CAF28583.1| RNA polymerase beta'
           subunit-2 [Nymphaea alba]
          Length = 1401

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = +3

Query: 102 LIPEEVHILPGSSSIMVRNNSIIGVDTQITF 194
           +IPEEVHILPGSSSIMVRNNSIIGVDT+ITF
Sbjct: 671 VIPEEVHILPGSSSIMVRNNSIIGVDTRITF 701


>gb|ADX99115.1| RNA polymerase beta II subunit [Diostea juncea]
          Length = 699

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani]
          Length = 701

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99113.1| RNA polymerase beta II subunit [Neosparton ephedroides]
          Length = 667

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99112.1| RNA polymerase beta II subunit [Dipyrena glaberrima]
          Length = 701

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99109.1| RNA polymerase beta II subunit [Aloysia citrodora]
          Length = 700

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovatifolia]
          Length = 680

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 12  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 42


>gb|ADX99105.1| RNA polymerase beta II subunit [Phyla lanceolata]
          Length = 698

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 33  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 63


>gb|ADX99104.1| RNA polymerase beta II subunit [Lippia integrifolia]
          Length = 682

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 105 IPEEVHILPGSSSIMVRNNSIIGVDTQITFT 197
           IPEEVHILPGSSSIMVRNNS+IGVDTQIT T
Sbjct: 16  IPEEVHILPGSSSIMVRNNSLIGVDTQITLT 46