BLASTX nr result
ID: Rauwolfia21_contig00041409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00041409
(365 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAO49735.1| nuclear pore complex protein Nup98b [Nicotiana b... 64 2e-08
dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana b... 62 6e-08
gb|ABA95896.1| Nucleoporin autopeptidase family protein, express... 62 6e-08
ref|NP_001066246.2| Os12g0166000 [Oryza sativa Japonica Group] g... 62 6e-08
gb|EEE52825.1| hypothetical protein OsJ_35341 [Oryza sativa Japo... 62 6e-08
gb|EEC68918.1| hypothetical protein OsI_37599 [Oryza sativa Indi... 62 6e-08
ref|XP_006339886.1| PREDICTED: nuclear pore complex protein Nup9... 62 8e-08
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|... 62 8e-08
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9... 62 1e-07
ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup9... 62 1e-07
ref|XP_004233600.1| PREDICTED: uncharacterized protein LOC101266... 62 1e-07
tpg|DAA41628.1| TPA: hypothetical protein ZEAMMB73_986140 [Zea m... 62 1e-07
ref|NP_001145910.1| uncharacterized protein LOC100279429 [Zea ma... 62 1e-07
ref|XP_006664369.1| PREDICTED: uncharacterized protein DDB_G0274... 61 1e-07
ref|XP_003565591.1| PREDICTED: uncharacterized protein LOC100833... 61 2e-07
gb|AAT08673.1| nucleoporin [Hyacinthus orientalis] 61 2e-07
gb|EXC28321.1| Nuclear pore complex protein [Morus notabilis] 60 2e-07
ref|XP_006392256.1| hypothetical protein EUTSA_v10023238mg [Eutr... 60 3e-07
gb|EMJ11603.1| hypothetical protein PRUPE_ppa000784mg [Prunus pe... 60 3e-07
ref|XP_002446695.1| hypothetical protein SORBIDRAFT_06g020700 [S... 60 3e-07
>dbj|BAO49735.1| nuclear pore complex protein Nup98b [Nicotiana benthamiana]
Length = 756
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V+KYR ML+KK EQGAEFVSYDPV G WKFRV HF
Sbjct: 721 VNKYRDMLVKKTTEQGAEFVSYDPVEGHWKFRVSHF 756
>dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana benthamiana]
Length = 1023
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
+DKY+ ML +K +QGAEFVSYDPV GEWKFRV HF
Sbjct: 957 IDKYKDMLKRKAGDQGAEFVSYDPVKGEWKFRVQHF 992
>gb|ABA95896.1| Nucleoporin autopeptidase family protein, expressed [Oryza sativa
Japonica Group]
Length = 805
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKY++ML+KK EQGAEF+S+D V GEWKFRV HF
Sbjct: 757 VDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHF 792
>ref|NP_001066246.2| Os12g0166000 [Oryza sativa Japonica Group]
gi|255670083|dbj|BAF29265.2| Os12g0166000, partial
[Oryza sativa Japonica Group]
Length = 207
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKY++ML+KK EQGAEF+S+D V GEWKFRV HF
Sbjct: 159 VDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHF 194
>gb|EEE52825.1| hypothetical protein OsJ_35341 [Oryza sativa Japonica Group]
Length = 903
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKY++ML+KK EQGAEF+S+D V GEWKFRV HF
Sbjct: 855 VDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHF 890
>gb|EEC68918.1| hypothetical protein OsI_37599 [Oryza sativa Indica Group]
Length = 944
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKY++ML+KK EQGAEF+S+D V GEWKFRV HF
Sbjct: 896 VDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHF 931
>ref|XP_006339886.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 887
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V+KY+ MLIKK EQ AEFVSYDPV G+WKFRV HF
Sbjct: 852 VNKYKDMLIKKAVEQDAEFVSYDPVEGQWKFRVSHF 887
>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
transporter, putative [Ricinus communis]
Length = 957
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
++KY++ML +K EQGAEFVSYDPV GEWKFRV HF
Sbjct: 895 IEKYKEMLKRKAEEQGAEFVSYDPVKGEWKFRVNHF 930
>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Solanum tuberosum]
Length = 993
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
++KY++ML +K +QGAEFVSYDPV GEWKFRV HF
Sbjct: 939 IEKYKEMLKRKAGDQGAEFVSYDPVKGEWKFRVQHF 974
>ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Solanum tuberosum] gi|565389417|ref|XP_006360452.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Solanum tuberosum]
Length = 994
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
++KY++ML +K +QGAEFVSYDPV GEWKFRV HF
Sbjct: 940 IEKYKEMLKRKAGDQGAEFVSYDPVKGEWKFRVQHF 975
>ref|XP_004233600.1| PREDICTED: uncharacterized protein LOC101266481 [Solanum
lycopersicum]
Length = 946
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V+KY+ MLIKK EQ AEFVSYDPV G+WKFRV HF
Sbjct: 911 VNKYKDMLIKKAVEQHAEFVSYDPVEGQWKFRVSHF 946
>tpg|DAA41628.1| TPA: hypothetical protein ZEAMMB73_986140 [Zea mays]
Length = 926
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V++YR+ML+KK EQGAEFVS+D V GEWKFRV HF
Sbjct: 885 VERYREMLVKKAEEQGAEFVSFDAVKGEWKFRVKHF 920
>ref|NP_001145910.1| uncharacterized protein LOC100279429 [Zea mays]
gi|219884925|gb|ACL52837.1| unknown [Zea mays]
Length = 714
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V++YR+ML+KK EQGAEFVS+D V GEWKFRV HF
Sbjct: 673 VERYREMLVKKAEEQGAEFVSFDAVKGEWKFRVKHF 708
>ref|XP_006664369.1| PREDICTED: uncharacterized protein DDB_G0274915-like [Oryza
brachyantha]
Length = 976
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKY++ML+KK EQGAEF+S+D GEWKFRV HF
Sbjct: 928 VDKYKEMLVKKAEEQGAEFISFDAAKGEWKFRVKHF 963
>ref|XP_003565591.1| PREDICTED: uncharacterized protein LOC100833671 [Brachypodium
distachyon]
Length = 818
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
VDKYR ML+KK EQGAEF+S+D GEWKFRV HF
Sbjct: 767 VDKYRDMLVKKAEEQGAEFISFDASKGEWKFRVKHF 802
>gb|AAT08673.1| nucleoporin [Hyacinthus orientalis]
Length = 161
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V+KY++MLIKK EQGAEFVSYD GEWKFRV HF
Sbjct: 103 VEKYKEMLIKKAEEQGAEFVSYDADKGEWKFRVKHF 138
>gb|EXC28321.1| Nuclear pore complex protein [Morus notabilis]
Length = 1018
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF*STQPKMRLNSE 144
++KY+ ML +K +QGAEFVSYDPV GEWKFRV HF ++ K+R E
Sbjct: 963 IEKYKDMLKRKAEDQGAEFVSYDPVKGEWKFRVNHF--SEYKLREEDE 1008
>ref|XP_006392256.1| hypothetical protein EUTSA_v10023238mg [Eutrema salsugineum]
gi|557088762|gb|ESQ29542.1| hypothetical protein
EUTSA_v10023238mg [Eutrema salsugineum]
Length = 963
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF*STQP 123
VDKY++ML +K EQGA+FVS+D V GEWKFRV HF S +P
Sbjct: 917 VDKYKEMLKRKAEEQGAKFVSFDAVNGEWKFRVEHFSSYKP 957
>gb|EMJ11603.1| hypothetical protein PRUPE_ppa000784mg [Prunus persica]
Length = 1004
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 4 DKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
+KY+QML KK +QGAEFVSYDP+ GEWKF+V HF
Sbjct: 951 EKYKQMLKKKAEDQGAEFVSYDPLKGEWKFKVSHF 985
>ref|XP_002446695.1| hypothetical protein SORBIDRAFT_06g020700 [Sorghum bicolor]
gi|241937878|gb|EES11023.1| hypothetical protein
SORBIDRAFT_06g020700 [Sorghum bicolor]
Length = 943
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 VDKYRQMLIKKGAEQGAEFVSYDPVAGEWKFRVPHF 108
V++YR+ML+KK EQGAEFVS+D GEWKFRV HF
Sbjct: 902 VERYREMLVKKAEEQGAEFVSFDAAKGEWKFRVKHF 937