BLASTX nr result

ID: Rauwolfia21_contig00041322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00041322
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...    68   1e-09
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...    63   5e-08
gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao]               57   3e-06

>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 541  SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362
            SQI+ANK T+S+LPDKGERI KQIA+L LELD ++  K  E +    DD++G  + VLN+
Sbjct: 984  SQILANKATVSKLPDKGERIQKQIAELNLELDKMRMTKRIETEVIDLDDVTGKLENVLNL 1043


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
            gi|223544553|gb|EEF46070.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1109

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = -1

Query: 541  SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362
            SQ++ N  T+SRLPD+G ++ KQI+DL LELD I   K+T+ +    DD++G  QR LN+
Sbjct: 1050 SQLLGNMATVSRLPDRGAKLQKQISDLNLELDKINMEKSTKEEVIDLDDLTGELQRALNV 1109


>gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao]
          Length = 1060

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/60 (51%), Positives = 42/60 (70%)
 Frame = -1

Query: 541  SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362
            SQI +NK T+SRLPDKG +I KQIA+L  EL  ++  K  +++    DDI+G  QRVLN+
Sbjct: 1002 SQIFSNKVTVSRLPDKGAKIEKQIAELNEELHKMKMAKEAKDEVG-VDDITGELQRVLNV 1060


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