BLASTX nr result
ID: Rauwolfia21_contig00041322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00041322 (541 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-... 68 1e-09 ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu... 63 5e-08 gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao] 57 3e-06 >ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera] gi|296088517|emb|CBI37508.3| unnamed protein product [Vitis vinifera] Length = 1043 Score = 68.2 bits (165), Expect = 1e-09 Identities = 33/60 (55%), Positives = 44/60 (73%) Frame = -1 Query: 541 SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362 SQI+ANK T+S+LPDKGERI KQIA+L LELD ++ K E + DD++G + VLN+ Sbjct: 984 SQILANKATVSKLPDKGERIQKQIAELNLELDKMRMTKRIETEVIDLDDVTGKLENVLNL 1043 >ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis] gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis] Length = 1109 Score = 62.8 bits (151), Expect = 5e-08 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = -1 Query: 541 SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362 SQ++ N T+SRLPD+G ++ KQI+DL LELD I K+T+ + DD++G QR LN+ Sbjct: 1050 SQLLGNMATVSRLPDRGAKLQKQISDLNLELDKINMEKSTKEEVIDLDDLTGELQRALNV 1109 >gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao] Length = 1060 Score = 57.0 bits (136), Expect = 3e-06 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = -1 Query: 541 SQIVANKDTMSRLPDKGERIYKQIADLKLELDSIQEGKTTENKTNQFDDISGVFQRVLNM 362 SQI +NK T+SRLPDKG +I KQIA+L EL ++ K +++ DDI+G QRVLN+ Sbjct: 1002 SQIFSNKVTVSRLPDKGAKIEKQIAELNEELHKMKMAKEAKDEVG-VDDITGELQRVLNV 1060