BLASTX nr result

ID: Rauwolfia21_contig00041250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00041250
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   145   3e-40
gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba]      145   3e-40
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    99   4e-19
ref|XP_006851262.1| hypothetical protein AMTR_s00172p00028840 [A...    61   2e-07

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  145 bits (366), Expect(2) = 3e-40
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -1

Query: 290  VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRVTHPFATL 111
            VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPR+THPFATL
Sbjct: 998  VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPFATL 1057

Query: 110  FSTLLTSWARQAT 72
            FST+ TSWARQAT
Sbjct: 1058 FSTVPTSWARQAT 1070



 Score = 45.4 bits (106), Expect(2) = 3e-40
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -3

Query: 66   LGASFPSA*LPENNVRLACVKH 1
            LGASFPSA LPENNVRLACVKH
Sbjct: 1073 LGASFPSAQLPENNVRLACVKH 1094


>gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 187

 Score =  145 bits (366), Expect(2) = 3e-40
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -1

Query: 290 VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRVTHPFATL 111
           VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPR+THPFATL
Sbjct: 69  VPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPFATL 128

Query: 110 FSTLLTSWARQAT 72
           FST+ TSWARQAT
Sbjct: 129 FSTVPTSWARQAT 141



 Score = 45.4 bits (106), Expect(2) = 3e-40
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -3

Query: 66  LGASFPSA*LPENNVRLACVKH 1
           LGASFPSA LPENNVRLACVKH
Sbjct: 144 LGASFPSAQLPENNVRLACVKH 165


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 55/85 (64%), Positives = 56/85 (65%)
 Frame = +1

Query: 34  GELGRRKRGS*LKVACLAQEVRRVENKVANGCVTRGNLPNSSGQILKKAKKRCXXXXXXX 213
           G     K    +KVACLAQEV  VENKVANGCV RGNLPNSSGQILKKAKK         
Sbjct: 106 GSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK--------- 156

Query: 214 XXXXXXXXTKPMMLSWSFRMISHTG 288
                   TKPMMLSWSFRMISHTG
Sbjct: 157 -------LTKPMMLSWSFRMISHTG 174


>ref|XP_006851262.1| hypothetical protein AMTR_s00172p00028840 [Amborella trichopoda]
           gi|548854949|gb|ERN12843.1| hypothetical protein
           AMTR_s00172p00028840 [Amborella trichopoda]
          Length = 82

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = +1

Query: 91  EVRRVENKVANGCVTRGNLPNSSGQILKKAKKRC 192
           EV  VEN+VANGCVT GNLPNSSGQILKKAKK C
Sbjct: 41  EVGTVENQVANGCVTSGNLPNSSGQILKKAKKPC 74