BLASTX nr result

ID: Rauwolfia21_contig00041059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00041059
         (389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80...    68   1e-09
emb|CBI36284.3| unnamed protein product [Vitis vinifera]               64   2e-08
gb|AHG12641.1| polygalacturonase [Nicotiana tabacum]                   63   4e-08
ref|XP_004241700.1| PREDICTED: probable polygalacturonase At1g80...    62   8e-08
ref|XP_006356262.1| PREDICTED: probable polygalacturonase At1g80...    61   2e-07
ref|XP_006465356.1| PREDICTED: probable polygalacturonase At1g80...    59   9e-07
ref|NP_001275837.1| polygalacturonase precursor [Citrus sinensis...    59   9e-07
ref|XP_006427234.1| hypothetical protein CICLE_v10027523mg [Citr...    57   3e-06
ref|XP_004486687.1| PREDICTED: probable polygalacturonase At1g80...    56   4e-06
ref|XP_004486686.1| PREDICTED: probable polygalacturonase At1g80...    56   4e-06
ref|XP_006364199.1| PREDICTED: probable polygalacturonase At1g80...    55   7e-06

>ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 452

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -3

Query: 252 SFFWSFLPHSTFSFVSS----FIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSN 85
           SFF+   P S+ S  S      I ++ ++L L + N  GF PLIQLPHS +   R     
Sbjct: 2   SFFFFLRPSSSSSSSSPQSLCLICTVFIFLVLFLINVEGFEPLIQLPHSPAARPRL---- 57

Query: 84  STTVLYIDDFGAKGDGIADDTQIFRYVW 1
            T +LY++ FGAKGDG+ DDT  FR  W
Sbjct: 58  ETKILYVNQFGAKGDGVQDDTDAFRNAW 85


>emb|CBI36284.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -3

Query: 198 IYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFGAKGDGIADDTQ 19
           I ++ ++L L + N  GF PLIQLPHS +   R      T +LY++ FGAKGDG+ DDT 
Sbjct: 13  ICTVFIFLVLFLINVEGFEPLIQLPHSPAARPRL----ETKILYVNQFGAKGDGVQDDTD 68

Query: 18  IFRYVW 1
            FR  W
Sbjct: 69  AFRNAW 74


>gb|AHG12641.1| polygalacturonase [Nicotiana tabacum]
          Length = 455

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/85 (43%), Positives = 50/85 (58%)
 Frame = -3

Query: 255 SSFFWSFLPHSTFSFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTT 76
           S F +S+   ++ +F +S +Y +  Y  L   N NGF  +IQLP  TS S RNT+  S T
Sbjct: 10  SCFNFSYYYSTSVAFFAS-LYGI--YFVLISANVNGFDSVIQLP--TSASLRNTTRKSET 64

Query: 75  VLYIDDFGAKGDGIADDTQIFRYVW 1
           +  + DFGA GDGI DDT  F+  W
Sbjct: 65  LFDVSDFGAVGDGITDDTNSFKDAW 89


>ref|XP_004241700.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           lycopersicum]
          Length = 437

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = -3

Query: 216 SFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFGAKGDG 37
           S  +S +Y+ I + FL   N N F   IQ P     +  ++   S ++LY+++FGAKGDG
Sbjct: 7   SIFASLLYNTI-FSFLLFVNVNSFDSFIQFP-----TLEDSRGKSVSLLYVNEFGAKGDG 60

Query: 36  IADDTQIFRYVW 1
           I DDT+IF+YVW
Sbjct: 61  ITDDTKIFQYVW 72


>ref|XP_006356262.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           tuberosum]
          Length = 437

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = -3

Query: 216 SFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFGAKGDG 37
           S  +S +YS I++ FL   N N F   IQ P     + +++   S ++LY+++FGAKGDG
Sbjct: 7   SIFASLLYS-IMFSFLLFVNVNSFDSFIQFP-----TLKDSRDKSLSLLYVNEFGAKGDG 60

Query: 36  IADDTQIFRYVW 1
           I DDT+IF+ VW
Sbjct: 61  ITDDTKIFQDVW 72


>ref|XP_006465356.1| PREDICTED: probable polygalacturonase At1g80170 isoform X2 [Citrus
           sinensis]
          Length = 445

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = -3

Query: 237 FLPHSTFSFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDD 58
           F   STF  V   +  +++ L  ++ +T GF  L++LPHS S     T S S  V+++ D
Sbjct: 6   FCSFSTFFIV---LIHVLVCLSASLVSTEGFDSLLELPHSGSN---RTRSKSKRVIFVGD 59

Query: 57  FGAKGDGIADDTQIFRYVW 1
           FGAKGDG  DDT+ F   W
Sbjct: 60  FGAKGDGFNDDTEAFANAW 78


>ref|NP_001275837.1| polygalacturonase precursor [Citrus sinensis]
           gi|122894108|gb|ABM67700.1| polygalacturonase [Citrus
           sinensis]
          Length = 445

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = -3

Query: 237 FLPHSTFSFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDD 58
           F   STF  V   +  +++ L  ++ +T GF  L++LPHS S     T S S  V+++ D
Sbjct: 6   FCSFSTFFIV---LIHVLVCLSASLVSTEGFDSLLELPHSGSNG---TRSKSKRVIFVGD 59

Query: 57  FGAKGDGIADDTQIFRYVW 1
           FGAKGDG  DDT+ F   W
Sbjct: 60  FGAKGDGFNDDTEAFANAW 78


>ref|XP_006427234.1| hypothetical protein CICLE_v10027523mg [Citrus clementina]
           gi|557529224|gb|ESR40474.1| hypothetical protein
           CICLE_v10027523mg [Citrus clementina]
          Length = 427

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = -3

Query: 174 FLNIRNTNGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFGAKGDGIADDTQIFRYVW 1
           F ++ +T GF  L++LPHS S     T S S  V+++ DFGAKGDG  DDT+ F   W
Sbjct: 6   FSSLVSTEGFDSLLELPHSGSNG---TRSKSKRVIFVGDFGAKGDGFNDDTEAFANAW 60


>ref|XP_004486687.1| PREDICTED: probable polygalacturonase At1g80170-like isoform X2
           [Cicer arietinum]
          Length = 443

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = -3

Query: 213 FVSSFIYSLILYLFLNIRNT------NGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFG 52
           + SS I ++I+++ +N+  T       GF PLI+LPHS  GS R T S    V  I DFG
Sbjct: 4   YFSSSIITIIIFIHINLFLTPFHTQAQGFDPLIRLPHS--GSTR-TRSKFRRVFPITDFG 60

Query: 51  AKGDGIADDTQIFRYVW 1
           AKGDG  +DT+ F  VW
Sbjct: 61  AKGDGFHNDTKAFLEVW 77


>ref|XP_004486686.1| PREDICTED: probable polygalacturonase At1g80170-like isoform X1
           [Cicer arietinum]
          Length = 446

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = -3

Query: 213 FVSSFIYSLILYLFLNIRNT------NGFHPLIQLPHSTSGSFRNTSSNSTTVLYIDDFG 52
           + SS I ++I+++ +N+  T       GF PLI+LPHS  GS R T S    V  I DFG
Sbjct: 4   YFSSSIITIIIFIHINLFLTPFHTQAQGFDPLIRLPHS--GSTR-TRSKFRRVFPITDFG 60

Query: 51  AKGDGIADDTQIFRYVW 1
           AKGDG  +DT+ F  VW
Sbjct: 61  AKGDGFHNDTKAFLEVW 77


>ref|XP_006364199.1| PREDICTED: probable polygalacturonase At1g80170-like [Solanum
           tuberosum]
          Length = 452

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/90 (41%), Positives = 49/90 (54%)
 Frame = -3

Query: 270 MDGLESSFFWSFLPHSTFSFVSSFIYSLILYLFLNIRNTNGFHPLIQLPHSTSGSFRNTS 91
           M  + SSF  SF   S  + V+ F     LY  L   N +GF  L+QL  + S S R   
Sbjct: 1   MGKMASSFISSFNFSSYSTSVALFASLYSLYFLLISANVSGFESLLQLLPA-SASLR--- 56

Query: 90  SNSTTVLYIDDFGAKGDGIADDTQIFRYVW 1
           S S ++  ++DFGA GDGI DDT+ F+ VW
Sbjct: 57  SKSESLFQVNDFGAAGDGITDDTKSFKDVW 86


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