BLASTX nr result

ID: Rauwolfia21_contig00039493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00039493
         (284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_003038304.1| hypothetical protein [Streptococcus anginosu...    89   8e-16
ref|WP_003815164.1| conserved hypothetical protein [Bifidobacter...    73   4e-11
ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium ef...    70   3e-10
ref|WP_020878809.1| hypothetical protein [Desulfococcus multivor...    63   4e-08
ref|WP_003818641.1| hypothetical protein [Bifidobacterium bifidu...    59   7e-07
gb|ADI17626.1| hypothetical protein [uncultured delta proteobact...    57   3e-06
ref|YP_005415587.1| hypothetical protein RSPPHO_03278, partial [...    56   4e-06
ref|YP_005415584.1| hypothetical protein RSPPHO_03275, partial [...    56   4e-06
ref|YP_005415572.1| hypothetical protein RSPPHO_03263, partial [...    56   4e-06
gb|ADI17937.1| hypothetical protein [uncultured Desulfobacterale...    56   6e-06

>ref|WP_003038304.1| hypothetical protein [Streptococcus anginosus]
           gi|383341230|gb|EID19495.1| hypothetical protein
           HMPREF1043_0707 [Streptococcus anginosus subsp. whileyi
           CCUG 39159]
          Length = 191

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = -3

Query: 282 LVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLG 103
           L+NSRFPL SA    +  H       PL+PKLRGHFAEFL+HDSLDRL ILYL+T VGLG
Sbjct: 3   LINSRFPLVSAAPIPSHQHVVLKVGAPLLPKLRGHFAEFLNHDSLDRLSILYLTTCVGLG 62

Query: 102 YGRTRHLAHEAFLDSTGS 49
           YG+    A +AFL S GS
Sbjct: 63  YGQFEPHA-DAFLGSIGS 79


>ref|WP_003815164.1| conserved hypothetical protein [Bifidobacterium bifidum]
           gi|313133678|gb|EFR51295.1| hypothetical protein
           BBNG_01843 [Bifidobacterium bifidum NCIMB 41171]
          Length = 61

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 39/65 (60%), Positives = 45/65 (69%)
 Frame = -3

Query: 282 LVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLG 103
           +VNSR+PL  A    ++P G     V L+PK R  FAEFL  DSLDR GILYL+TSVGLG
Sbjct: 1   MVNSRYPLACATPRRSSPQG-----VSLMPKAREQFAEFLDQDSLDRFGILYLTTSVGLG 55

Query: 102 YGRTR 88
           YGR R
Sbjct: 56  YGRQR 60


>ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium efficiens YS-314]
           gi|499388034|ref|WP_011075501.1| hypothetical protein
           [Corynebacterium efficiens] gi|23493383|dbj|BAC18353.1|
           conserved hypothetical protein [Corynebacterium
           efficiens YS-314]
          Length = 261

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
 Frame = -3

Query: 267 FPLDSAPLTATTPHGC-----TTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLG 103
           F   S P     PH       +  Q PL+PKLRGHFAEFL+H S +RL ILYL+T VGLG
Sbjct: 75  FSKQSLPSILCDPHQLQKQIPSPVQAPLLPKLRGHFAEFLNHSSPERLSILYLTTCVGLG 134

Query: 102 YGRTRHLA 79
           YG   H+A
Sbjct: 135 YGPNMHIA 142


>ref|WP_020878809.1| hypothetical protein [Desulfococcus multivorans]
           gi|523460467|gb|EPR32483.1| hypothetical protein
           dsmv_3640 [Desulfococcus multivorans DSM 2059]
          Length = 152

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/81 (49%), Positives = 49/81 (60%)
 Frame = -3

Query: 282 LVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLG 103
           LVNSR+   SA    +T      A   L+PKLR HFAEFL+  SL RLGIL   T VGL 
Sbjct: 3   LVNSRYRHFSAAAFCSTCKTLHIAAAHLLPKLRCHFAEFLNQGSLKRLGILSPPTCVGLR 62

Query: 102 YGRTRHLAHEAFLDSTGSLTV 40
           Y    H++ EAFL S GS+++
Sbjct: 63  YDHL-HISIEAFLGSLGSISL 82


>ref|WP_003818641.1| hypothetical protein [Bifidobacterium bifidum]
           gi|407076843|gb|EKE49756.1| hypothetical protein
           B216_09698 [Bifidobacterium bifidum LMG 13195]
          Length = 38

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 198 IPKLRGHFAEFLHHDSLDRLGILYLSTSVGLGYGRTR 88
           +PK R  FAEFL  DSLDR GILYL+TSVGLGYGR R
Sbjct: 1   MPKAREQFAEFLDQDSLDRFGILYLTTSVGLGYGRQR 37


>gb|ADI17626.1| hypothetical protein [uncultured delta proteobacterium
           HF0130_19C20]
          Length = 91

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = -3

Query: 210 QVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLGYGRTRHLAHEAFLDSTGS 49
           Q  L+PKLR  FAEFL+  SL RLGILY  T VGLGYG +  L  EAFLDS  S
Sbjct: 13  QALLLPKLRSQFAEFLNMISLKRLGILYPPTCVGLGYG-SPVLCLEAFLDSVES 65


>ref|YP_005415587.1| hypothetical protein RSPPHO_03278, partial [Rhodospirillum
           photometricum DSM 122] gi|504226156|ref|WP_014413258.1|
           hypothetical protein, partial [Rhodospirillum
           photometricum] gi|378401501|emb|CCG06617.1| Putative
           uncharacterized protein, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 114

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/55 (60%), Positives = 36/55 (65%)
 Frame = -1

Query: 263 PWTLRPSPPPHRTGARQLRSPLSQSYGGILPSSFTTIHSIASVYSTYPPVSV*GT 99
           P    PSP   +T     R+P S+SYGGILPSSF TI S A VYST PPVSV GT
Sbjct: 29  PLVCAPSPWLPKT-----RAPFSRSYGGILPSSFNTILSSALVYSTSPPVSVWGT 78


>ref|YP_005415584.1| hypothetical protein RSPPHO_03275, partial [Rhodospirillum
           photometricum DSM 122] gi|504226153|ref|WP_014413255.1|
           hypothetical protein, partial [Rhodospirillum
           photometricum] gi|378401498|emb|CCG06614.1| Putative
           uncharacterized protein, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 114

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/55 (60%), Positives = 36/55 (65%)
 Frame = -1

Query: 263 PWTLRPSPPPHRTGARQLRSPLSQSYGGILPSSFTTIHSIASVYSTYPPVSV*GT 99
           P    PSP   +T     R+P S+SYGGILPSSF TI S A VYST PPVSV GT
Sbjct: 29  PLVCAPSPWLPKT-----RAPFSRSYGGILPSSFNTILSSALVYSTSPPVSVWGT 78


>ref|YP_005415572.1| hypothetical protein RSPPHO_03263, partial [Rhodospirillum
           photometricum DSM 122] gi|504226141|ref|WP_014413243.1|
           hypothetical protein, partial [Rhodospirillum
           photometricum] gi|378401486|emb|CCG06602.1| Putative
           uncharacterized protein, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 114

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/55 (60%), Positives = 36/55 (65%)
 Frame = -1

Query: 263 PWTLRPSPPPHRTGARQLRSPLSQSYGGILPSSFTTIHSIASVYSTYPPVSV*GT 99
           P    PSP   +T     R+P S+SYGGILPSSF TI S A VYST PPVSV GT
Sbjct: 29  PLVCAPSPWLPKT-----RAPFSRSYGGILPSSFNTILSSALVYSTSPPVSVWGT 78


>gb|ADI17937.1| hypothetical protein [uncultured Desulfobacterales bacterium
           HF0200_07G10]
          Length = 70

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/51 (62%), Positives = 35/51 (68%)
 Frame = -3

Query: 201 LIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLGYGRTRHLAHEAFLDSTGS 49
           LIPKLR  FAEFL+  SL RL ILY ST VGL YGR  + + E FL S GS
Sbjct: 5   LIPKLRSQFAEFLNQSSLKRLSILYSSTCVGLEYGRP-NSSLEVFLGSMGS 54


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