BLASTX nr result
ID: Rauwolfia21_contig00039011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00039011
(349 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661... 97 2e-18
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 79 5e-13
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t... 79 5e-13
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 79 5e-13
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 79 5e-13
gb|AAT40486.1| putative polyprotein [Solanum demissum] 77 2e-12
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 76 5e-12
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 76 5e-12
emb|CAN60885.1| hypothetical protein VITISV_008815 [Vitis vinifera] 74 2e-11
gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlise... 74 3e-11
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 72 6e-11
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 71 1e-10
gb|AAT71979.1| At5g39185 [Arabidopsis thaliana] 71 1e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 71 2e-10
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 71 2e-10
gb|AAF79663.1|AC022314_4 F9C16.10 [Arabidopsis thaliana] 70 4e-10
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 69 5e-10
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 69 8e-10
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 67 2e-09
ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, part... 64 2e-08
>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
Length = 516
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 8/96 (8%)
Frame = +2
Query: 77 NGQSSKDVSGL--------YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLA 232
N +S+KD SG Y L S DN G +IT VQL+ E YD+W A R +L A++K
Sbjct: 12 NDESNKDESGSHLKKQISPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFR 71
Query: 233 FIDGTAMPPPDDSPGIDDWWTMNSIIVSWIFILLNP 340
F+DG+ P D +P IDDWWT+NS+IVSWIF + P
Sbjct: 72 FVDGSIKKPDDAAPEIDDWWTVNSMIVSWIFNTIEP 107
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 79.3 bits (194), Expect = 5e-13
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L + DNSG +I+H L+ Y++W F+TAL ++KK F+DGT P D SP ++DW
Sbjct: 21 YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80
Query: 290 WTMNSIIVSWI 322
T+N+++VSW+
Sbjct: 81 LTINALLVSWM 91
>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 370
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 86 SSKDVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPD 265
+S V YTL + DN G LIT V L + Y++W AL AK+K FIDGT P
Sbjct: 22 ASSVVQSPYTLSNSDNPGTLITSVVLNGDNYNEWSEEMLNALQAKRKTGFIDGTIQKPAS 81
Query: 266 DSPGIDDWWTMNSIIVSWIFILLNP 340
DSP ++W T+NS+IV WI + + P
Sbjct: 82 DSPDFENWKTVNSMIVGWIRVSIEP 106
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 79.3 bits (194), Expect = 5e-13
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L + DNSG +I+H L+ Y++W F+TAL ++KK F+DGT P D SP ++DW
Sbjct: 21 YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80
Query: 290 WTMNSIIVSWI 322
T+N+++VSW+
Sbjct: 81 LTINALLVSWM 91
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 79.3 bits (194), Expect = 5e-13
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L + DNSG +I+H L+ Y++W F+TAL ++KK F+DGT P D SP ++DW
Sbjct: 21 YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80
Query: 290 WTMNSIIVSWI 322
T+N+++VSW+
Sbjct: 81 LTINALLVSWM 91
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +2
Query: 95 DVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSP 274
D + Y L+S D++G+ IT V L+ Y++W A R A AKKKL FIDG P ++
Sbjct: 3 DPTSPYFLLSADHTGICITPVVLKGYNYEEWAKAMRNAFRAKKKLGFIDGLITQPKEEGF 62
Query: 275 GIDDWWTMNSIIVSWIFILLNPT 343
+DDW+ +NS+++ W+F ++P+
Sbjct: 63 ELDDWYAVNSMLIVWVFNTIDPS 85
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L S +N +IT VQL+ + YD+W A T L A+K F+DG+ +DS ++DW
Sbjct: 5 YALTSNNNPANIITQVQLKCDNYDEWARAVHTILLAEKIYGFVDGSIKQLDNDSSKLEDW 64
Query: 290 WTMNSIIVSWIFILLNP 340
WT+NS++VSW+F + P
Sbjct: 65 WTVNSMLVSWLFNTIEP 81
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +2
Query: 83 QSSKDVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPP 262
+ + +S Y+L S DNSG +IT VQL+ E YD+W A TAL AKKK F DG P
Sbjct: 6 KEGEKLSNHYSLNSNDNSGNIITQVQLRGENYDEWARAMWTALRAKKKYGFXDGXIKQPV 65
Query: 263 DDSPGIDDWWTMNSI 307
+++ I++WWT+NS+
Sbjct: 66 ENAQEIENWWTINSM 80
>emb|CAN60885.1| hypothetical protein VITISV_008815 [Vitis vinifera]
Length = 111
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = +2
Query: 83 QSSKDVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPP 262
+ + +S Y+L S DN G +IT A RTAL AKKK F+DGT P
Sbjct: 6 KEGEKLSNPYSLNSNDNPGNIITQ-------------AMRTALRAKKKYGFVDGTIKQPI 52
Query: 263 DDSPGIDDWWTMNSIIVSWIFILLNP 340
+++P I+DWWT+NS++VSW+F + P
Sbjct: 53 ENAPEIEDWWTINSMLVSWVFNTIEP 78
>gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlisea aurea]
Length = 131
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +2
Query: 86 SSKDVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPD 265
S+ ++ + L+ GD+ GLL+T +QL+ E YD+W A R L AKKK F+DGT P
Sbjct: 10 SNNGLADCFNLLPGDHPGLLLTTIQLRGENYDEWAKAMRAGLRAKKKYGFVDGTITERPP 69
Query: 266 DSPGIDDWWTMNSIIVSWIFILLNP 340
+ +D W +NS++V+WI + P
Sbjct: 70 EI-SVDLWEQVNSMLVAWIINTVEP 93
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
YTL S DN G +I+ V+L + Y++W AL AK+K FI+GT PP + P ++W
Sbjct: 32 YTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENW 91
Query: 290 WTMNSIIVSWIFILLNP 340
+NS+IV WI + P
Sbjct: 92 TAVNSMIVGWIRTSIEP 108
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L SGDN G LI+ L+ YD+W R AL A+KK F DGT P + +P DDW
Sbjct: 24 YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDW 83
Query: 290 WTMNSIIVSWIFILLN 337
N+++VSW+ + ++
Sbjct: 84 IANNALVVSWMKLTIH 99
>gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]
Length = 348
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L SGDN G LI+ L+ YD+W R AL A+KK F DGT P + +P DDW
Sbjct: 24 YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDW 83
Query: 290 WTMNSIIVSWIFILLN 337
N+++VSW+ + ++
Sbjct: 84 IANNALVVSWMKLTIH 99
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
YTL S DN G +I+ V L + Y++W AL AK+K FI+G+ PP D+P ++W
Sbjct: 27 YTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENW 86
Query: 290 WTMNSIIVSWIFILLNP 340
+NS+IV WI + P
Sbjct: 87 QAVNSMIVGWIRASIEP 103
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
YTL S DN G +I+ V L + Y++W AL AK+K FI+G+ PP D+P ++W
Sbjct: 27 YTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENW 86
Query: 290 WTMNSIIVSWIFILLNP 340
+NS+IV WI + P
Sbjct: 87 QAVNSMIVGWIRASIEP 103
>gb|AAF79663.1|AC022314_4 F9C16.10 [Arabidopsis thaliana]
Length = 238
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L DN G LI+ L + YDKW + R AL A+KK F DG+ P DDS +DW
Sbjct: 155 YDLTHSDNPGTLISQPLLPRPNYDKWSINIRLALQAQKKFGFADGSIPKPDDDSEDYEDW 214
Query: 290 WTMNSIIVSWIFILLNPT 343
N+++VSWI + + T
Sbjct: 215 CANNALVVSWIKLTIVET 232
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L SGDN G LI+ L+ YD+W R AL A+KK F DG+ P + P +DW
Sbjct: 25 YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDW 84
Query: 290 WTMNSIIVSWIFILLNPT 343
N+++VSW+ + ++ T
Sbjct: 85 TANNALVVSWMKLTIDET 102
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y L S DN G +IT VQL+ AL AKKK F+DG+ P +DSP ++DW
Sbjct: 5 YALTSNDNPGNIITQVQLK-------------ALRAKKKYGFVDGSIKQPDNDSPELEDW 51
Query: 290 WTMNSIIVSW 319
WT+NS++VSW
Sbjct: 52 WTINSMLVSW 61
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +2
Query: 110 YTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFIDGTAMPPPDDSPGIDDW 289
Y + + DN G LI+ V L+++ Y +W +L AK+KL F+DGT +P P P + W
Sbjct: 14 YGITASDNPGALISSVILKEDNYSEWAEELMNSLQAKQKLGFLDGT-IPKPTTEPALSSW 72
Query: 290 WTMNSIIVSWIFILLNPT 343
NS+I+ WI ++PT
Sbjct: 73 KAANSMIIGWIRTSIDPT 90
>ref|XP_006415896.1| hypothetical protein EUTSA_v10009346mg, partial [Eutrema
salsugineum] gi|557093667|gb|ESQ34249.1| hypothetical
protein EUTSA_v10009346mg, partial [Eutrema salsugineum]
Length = 272
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +2
Query: 62 IRAMSNGQSSKDVSGLYTLMSGDNSGLLITHVQLQQETYDKWVMAFRTALHAKKKLAFID 241
+ + S G ++ + Y L DN+G ++T + L Y++W +L K+K+ F+D
Sbjct: 12 VTSASEGAETRALVSPYYLHLSDNTGQVLTPILLNGSNYERWAKLMLNSLRTKRKIGFVD 71
Query: 242 GTAMPPPDDSPGIDDWWTMNSIIVSWIF 325
GT P D+S + W +NS+I+ WI+
Sbjct: 72 GTLKRPSDNSDEAEKWDMVNSMIIGWIY 99