BLASTX nr result
ID: Rauwolfia21_contig00038759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00038759
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 95 8e-18
gb|EMJ15706.1| hypothetical protein PRUPE_ppa016694mg, partial [... 89 8e-16
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 88 1e-15
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 87 2e-15
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 86 7e-15
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 84 1e-14
ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295... 84 2e-14
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 84 2e-14
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 82 6e-14
gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus pe... 82 6e-14
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 82 1e-13
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe... 82 1e-13
ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein A... 81 2e-13
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 81 2e-13
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 80 2e-13
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 80 3e-13
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 80 4e-13
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 79 5e-13
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 79 5e-13
gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [... 79 6e-13
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/97 (45%), Positives = 66/97 (68%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+ F + +++ KL GWK + LSQAGR LIKAV A+ Y MQCF++P SI + ++
Sbjct: 770 KKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEK 829
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ R+FFWG +E+ ++ AW+K+++PKK GGLG R
Sbjct: 830 MCRNFFWGQKEEERRVAWV-AWEKLFLPKKEGGLGIR 865
>gb|EMJ15706.1| hypothetical protein PRUPE_ppa016694mg, partial [Prunus persica]
Length = 564
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/97 (41%), Positives = 65/97 (67%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K +A +V ++I K++GWK+ LSQ GR LIK+V A+ +PM CF+LP+++ N ++S
Sbjct: 197 KVDALADVRDRINQKIAGWKLNMLSQVGREVLIKSVATAVPAFPMSCFLLPTTLCNTINS 256
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
F+WG + D G +++ ++W K+ PK GG+GFR
Sbjct: 257 DLGRFWWGHDGDHG-KIHWHSWKKLCTPKAVGGMGFR 292
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/98 (43%), Positives = 64/98 (65%)
Frame = +1
Query: 4 REAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDSL 183
++ F E++E++ S++SGW+ ++LS AGR TL KAV +M ++ M +LP SI N++D L
Sbjct: 10 KDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQL 69
Query: 184 TRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFRRA 297
+R F WG + Q +L W K+ PKK GGLG R A
Sbjct: 70 SRTFLWGSTAEKKKQ-HLVKWSKVCSPKKEGGLGVRAA 106
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/95 (43%), Positives = 65/95 (68%)
Frame = +1
Query: 7 EAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDSLT 186
EA V ++I SK++GWK++ LSQAGR LIK+V A+ YPM CF+L ++I N +++
Sbjct: 322 EALTYVRDRINSKIAGWKLKLLSQAGREVLIKSVAAAIPAYPMSCFLLLATICNSINADL 381
Query: 187 RDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
F+WG + + G +++ ++W K+ PK GG+GFR
Sbjct: 382 ARFWWGHDGNQG-KIHWHSWKKLCRPKAEGGMGFR 415
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/96 (44%), Positives = 65/96 (67%)
Frame = +1
Query: 4 REAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDSL 183
++ F EV+E++ S+LSGWK RSLS AGR TL KAV ++ I+ M +LP+S+ ++D +
Sbjct: 560 KDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKV 619
Query: 184 TRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+R+F WG + Q +L +W K+ PK +GGLG R
Sbjct: 620 SRNFLWGSTVEKRKQ-HLLSWKKVCRPKAAGGLGLR 654
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/97 (43%), Positives = 60/97 (61%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
KR+ F +++KIR K W R LSQAG+ ++KAV +M +Y M CF LPS++ K+ S
Sbjct: 656 KRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQS 715
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
L F+W + D ++ AW K+ PK +GGLGFR
Sbjct: 716 LLTRFWWDTKPDVRKTSWV-AWSKLTNPKNAGGLGFR 751
>ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295867 [Fragaria vesca
subsp. vesca]
Length = 265
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/97 (41%), Positives = 64/97 (65%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+EA + ++++ KL GWK +SLS AG+ LIK+V A+ +PM CF LP SI ++++S
Sbjct: 106 KKEALDYLFDRLKQKLDGWKQKSLSLAGKEILIKSVDLAIPAFPMSCFKLPMSICDEINS 165
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ +F+WG+ E G +++ +WD I PK G +G R
Sbjct: 166 VMGNFWWGYTE-KGNKIHWRSWDYISKPKLEGRMGIR 201
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/97 (41%), Positives = 61/97 (62%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K++A + + I K+ GWK +LSQAG+ LIKAV A+ YPM CF PS++ +++
Sbjct: 1370 KKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNG 1429
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ DF+WG + G ++ +WD + PKK GG+GFR
Sbjct: 1430 ILADFWWGNVDTRG--IHWKSWDFLARPKKDGGMGFR 1464
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/97 (40%), Positives = 62/97 (63%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+EA +V++++ KL GWK RSLS AG+ LIK+V A+ YPM CF P + + ++S
Sbjct: 200 KKEAVGYIVDRVQRKLVGWKQRSLSWAGKEILIKSVATAIPAYPMACFKFPKGVCDTINS 259
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+F+WG +G +++ +W+ + K+ GGLGFR
Sbjct: 260 ALSNFWWG-STSTGNRIHWKSWELLGKTKEEGGLGFR 295
>gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus persica]
Length = 681
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/97 (40%), Positives = 59/97 (60%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K A + E+I K+ GWK+ +LS AG+ L+KAVT A+ +PM CF P N+++S
Sbjct: 142 KNAALGYIKERILKKMDGWKLNTLSLAGKEVLLKAVTTAVPAFPMACFRFPEGTCNQINS 201
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
F+WG E++ ++ +W K+ + KK GGLGFR
Sbjct: 202 ALASFWWGNNEENA-GIHWKSWKKLCLAKKVGGLGFR 237
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/97 (37%), Positives = 63/97 (64%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
+R+ F + E+I K+ GWK + LS AG+ L+K V A+ IY M CF++P + +++
Sbjct: 574 RRQCFNSLKERIWKKIQGWKAKLLSVAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQQ 633
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ ++WG E+D +++ +W+K+ +PK+ GGLGFR
Sbjct: 634 VMARYWWG-EQDGQRKIHWLSWNKLCLPKQEGGLGFR 669
>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/97 (37%), Positives = 63/97 (64%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
+R+ F + E+I K+ GWK + LS AG+ L+K V A+ IY M CF++P + +++
Sbjct: 356 RRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQQ 415
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ ++WG E+D +++ +W+K+ +PK+ GGLGFR
Sbjct: 416 VMAHYWWG-EQDGQRKIHWLSWNKLCLPKQEGGLGFR 451
>ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 527
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/97 (38%), Positives = 61/97 (62%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+ + + K+ K+ WK+ +LS AGR TLIKAV A+ +PM CF P ++ N++D+
Sbjct: 166 KKASLSFIKSKLADKIQNWKLCTLSMAGRETLIKAVAQAVPTFPMHCFKFPITLCNELDA 225
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ +F+WG +D +++ +WD + PK GG+GFR
Sbjct: 226 MMANFWWGQHKDEH-KIHWKSWDFLGQPKDRGGMGFR 261
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/97 (41%), Positives = 62/97 (63%)
Frame = +1
Query: 4 REAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDSL 183
R F ++ KI++KLSGWK + LS AGR TL K V ++ Y MQ +P +I ++++ +
Sbjct: 192 RGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKI 251
Query: 184 TRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFRR 294
R F WG + + G + +L +WD +PK +GGLGF+R
Sbjct: 252 QRGFVWG-DSNQGRKAHLVSWDVCCLPKMNGGLGFKR 287
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/97 (37%), Positives = 62/97 (63%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
+R+ F + E+I K+ GWK + LS AG+ L+K V A+ IY M CF++P + N++
Sbjct: 1124 RRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCNEIQQ 1183
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ ++W E+D +++ +W+K+ +PK+ GGLGFR
Sbjct: 1184 VMARYWW-VEQDGQRKIHWLSWNKLCLPKQEGGLGFR 1219
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/97 (39%), Positives = 59/97 (60%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
KR+ F +V++IR + W +R LS AG+ L+KAV +M Y M CF LP+S+ ++ S
Sbjct: 702 KRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQS 761
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ F+W + D ++ +WDK+ +P GGLGFR
Sbjct: 762 VLTRFWWDSKPDKRKMAWV-SWDKLTLPINEGGLGFR 797
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/97 (36%), Positives = 62/97 (63%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
+R+ F + E+I K+ GWK + LS AG+ L+K V + IY M CF++P + +++
Sbjct: 1010 RRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQVVPIYMMNCFLIPKCLCDEIQQ 1069
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ ++WG E+D +++ +W+K+ +PK+ GGLGFR
Sbjct: 1070 VMARYWWG-EQDGQRKIHWLSWNKLCLPKQEGGLGFR 1105
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K++A + E+I KL GWK ++LS AG+ TLIK+V + +PM CF+LP + N+++S
Sbjct: 414 KKDALSYITERINRKLDGWKEKNLSWAGKETLIKSVAMVIPSFPMSCFLLPKYLGNQINS 473
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+F+WG E +++ W+ + K GGLGF+
Sbjct: 474 AISNFWWGKSESIN-KIHWICWESLGRAKAVGGLGFK 509
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+ A V E+++ K+ GWK SLS AG+ LIKA+ A+ +PMQCF + ++++S
Sbjct: 342 KKAAMNYVKERVKDKILGWKQSSLSLAGKEVLIKAIATAIPTFPMQCFKFTKGLCDEINS 401
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
F+WG + +S +++ +W + +PK GGLGFR
Sbjct: 402 EMAKFWWG-KPNSDTKIHWKSWSALCLPKSDGGLGFR 437
>gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/97 (41%), Positives = 59/97 (60%)
Frame = +1
Query: 1 KREAFLEVVEKIRSKLSGWKMRSLSQAGRATLIKAVT*AMLIYPMQCFMLPSSISNKVDS 180
K+EA + V ++I K+ GW LSQAGR LIK+V A+ YPM F P+++ ++DS
Sbjct: 343 KKEALVYVKDRILRKVHGWNQHCLSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDS 402
Query: 181 LTRDFFWGFEEDSG*QLYLNAWDKIYIPKKSGGLGFR 291
+ F+WG D+ ++N WD + PK GG+GFR
Sbjct: 403 VLAGFWWGQIGDNRKLHWIN-WDTLGQPKHEGGMGFR 438