BLASTX nr result

ID: Rauwolfia21_contig00038678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00038678
         (996 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243936.1| PREDICTED: DNA repair protein RAD7-like [Sol...    60   1e-06
ref|XP_006342372.1| PREDICTED: uncharacterized protein LOC102604...    60   1e-06
ref|XP_006342371.1| PREDICTED: uncharacterized protein LOC102604...    60   1e-06

>ref|XP_004243936.1| PREDICTED: DNA repair protein RAD7-like [Solanum lycopersicum]
          Length = 902

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 60/221 (27%), Positives = 95/221 (42%)
 Frame = +3

Query: 93  STDNGVSSDGLNLGTPESENQREIENWDLHFGAKEVSLADGIDLETGVLEDMNMVGVVAG 272
           ++ N +S  G  L         EI+N D     K     +  DL+ G   D +M GV+  
Sbjct: 71  ASKNALSDVGEILSNEGKSKDFEIDNGDTGKSLKSDFRVESADLDEG---DQDM-GVLDS 126

Query: 273 VEETRLEANEPACSADLRTSEWSNDRDAGNRKGQGKRKSGIQILLGAEHAWQGECEKRFL 452
                +  NE   S D      S  R    ++G+G + + +++        QGE   +FL
Sbjct: 127 EAVDEIGMNE---SDDFGNLVCSEGRIECVKEGKGDKSTSMEV--------QGEGYTKFL 175

Query: 453 NLRSGKRIAKIGVEGADGGSYKEVESNTKVDLDCCKQNRRILKDLGVNVGKSSRPEADAK 632
           +LRSGK+I+K  VE   GG+  +  S+ + D D    + ++ + +  + G     +    
Sbjct: 176 SLRSGKKISKRAVEERSGGAVGDAGSDYQNDCDEKLSHGKLSEGMSNSCGSDGSSDKLQT 235

Query: 633 EVENGGPVSNIKFNREEKGKSKVLENSVTRAVGMVKLEVEV 755
                  V   +F+REEK K  V E  +   V  VKLE EV
Sbjct: 236 SSVEPSSVKRRRFSREEKSKGIVSEQGLP-VVHSVKLESEV 275


>ref|XP_006342372.1| PREDICTED: uncharacterized protein LOC102604140 isoform X2 [Solanum
           tuberosum]
          Length = 1047

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 59/221 (26%), Positives = 93/221 (42%)
 Frame = +3

Query: 93  STDNGVSSDGLNLGTPESENQREIENWDLHFGAKEVSLADGIDLETGVLEDMNMVGVVAG 272
           ++ NG+S  G  L         EI+N D     K     +  DL+ G  +    +GV+  
Sbjct: 71  ASKNGLSDVGEILNNEGKSKDFEIDNGDTGNSLKSDVGVESADLDEGDQD----LGVLDS 126

Query: 273 VEETRLEANEPACSADLRTSEWSNDRDAGNRKGQGKRKSGIQILLGAEHAWQGECEKRFL 452
                +  NE   S D+     S  R    ++G+G + + +++        QGE   +FL
Sbjct: 127 EAVDEIGMNE---SDDIGNLVCSEGRIECVKEGKGDKNTSMEV--------QGEGNTKFL 175

Query: 453 NLRSGKRIAKIGVEGADGGSYKEVESNTKVDLDCCKQNRRILKDLGVNVGKSSRPEADAK 632
           +LRSGK+I+K  VE   GG+  +  S  + D D    + ++ + +  + G          
Sbjct: 176 SLRSGKKISKRAVEECSGGAVGDAGSVNQNDCDEKLSHGKLSEGMSNSCGSDGSSNKLQT 235

Query: 633 EVENGGPVSNIKFNREEKGKSKVLENSVTRAVGMVKLEVEV 755
                  V   KF+REEK K  V E  +   V  V LE EV
Sbjct: 236 SSVEPSSVKRRKFSREEKSKGIVSEQCLP-VVHSVNLESEV 275


>ref|XP_006342371.1| PREDICTED: uncharacterized protein LOC102604140 isoform X1 [Solanum
           tuberosum]
          Length = 1058

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 59/221 (26%), Positives = 93/221 (42%)
 Frame = +3

Query: 93  STDNGVSSDGLNLGTPESENQREIENWDLHFGAKEVSLADGIDLETGVLEDMNMVGVVAG 272
           ++ NG+S  G  L         EI+N D     K     +  DL+ G  +    +GV+  
Sbjct: 71  ASKNGLSDVGEILNNEGKSKDFEIDNGDTGNSLKSDVGVESADLDEGDQD----LGVLDS 126

Query: 273 VEETRLEANEPACSADLRTSEWSNDRDAGNRKGQGKRKSGIQILLGAEHAWQGECEKRFL 452
                +  NE   S D+     S  R    ++G+G + + +++        QGE   +FL
Sbjct: 127 EAVDEIGMNE---SDDIGNLVCSEGRIECVKEGKGDKNTSMEV--------QGEGNTKFL 175

Query: 453 NLRSGKRIAKIGVEGADGGSYKEVESNTKVDLDCCKQNRRILKDLGVNVGKSSRPEADAK 632
           +LRSGK+I+K  VE   GG+  +  S  + D D    + ++ + +  + G          
Sbjct: 176 SLRSGKKISKRAVEECSGGAVGDAGSVNQNDCDEKLSHGKLSEGMSNSCGSDGSSNKLQT 235

Query: 633 EVENGGPVSNIKFNREEKGKSKVLENSVTRAVGMVKLEVEV 755
                  V   KF+REEK K  V E  +   V  V LE EV
Sbjct: 236 SSVEPSSVKRRKFSREEKSKGIVSEQCLP-VVHSVNLESEV 275


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