BLASTX nr result

ID: Rauwolfia21_contig00037945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00037945
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY21752.1| Integrase, catalytic region, Zinc finger, CCHC-ty...    44   2e-08
gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group]      49   4e-08
emb|CAN69019.1| hypothetical protein VITISV_006852 [Vitis vinifera]    42   9e-07
emb|CAN62159.1| hypothetical protein VITISV_041771 [Vitis vinifera]    47   3e-06

>gb|EOY21752.1| Integrase, catalytic region, Zinc finger, CCHC-type, Peptidase
           aspartic, catalytic, putative [Theobroma cacao]
          Length = 1037

 Score = 43.9 bits (102), Expect(2) = 2e-08
 Identities = 19/36 (52%), Positives = 30/36 (83%)
 Frame = -3

Query: 128 IESIKMLLAFENFKGFKLFQIDVESSFLNCFVKEDV 21
           +E+I++LLAF  F  FKLFQ++V+S+FLN  ++E+V
Sbjct: 428 VEAIRLLLAFACFMNFKLFQMNVKSAFLNGLIQEEV 463



 Score = 39.7 bits (91), Expect(2) = 2e-08
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -2

Query: 255 DNFWVIVVQKKLD*LERNKV*FLVPKPHDHPFIGIKCFL 139
           +  W++ +QK+LD   R++V  LVP+P +HP +  K FL
Sbjct: 350 EKIWIMAMQKELDQFTRSRVWSLVPRPSNHPIVCTKWFL 388


>gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 22/36 (61%), Positives = 32/36 (88%)
 Frame = -3

Query: 128  IESIKMLLAFENFKGFKLFQIDVESSFLNCFVKEDV 21
            IE+I++LLAF   KGFKL+Q+DV+S+FLN F++E+V
Sbjct: 996  IEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEV 1031



 Score = 33.5 bits (75), Expect(2) = 4e-08
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -2

Query: 264  ALCDNFWVIVVQKKLD*LERNKV*FLVPKPHDHPFIGIK 148
            AL D  W+  + +KL+  ERN V  LV  P  H  IG K
Sbjct: 934  ALTDESWINAMHEKLENFERNTVWTLVEPPSGHNIIGTK 972


>emb|CAN69019.1| hypothetical protein VITISV_006852 [Vitis vinifera]
          Length = 492

 Score = 42.4 bits (98), Expect(3) = 9e-07
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -3

Query: 122 SIKMLLAFENFKGFKLFQIDVESSFLNCFVKEDV 21
           +I+MLL F  FK F L+Q+DV+S+FLN F+ E+V
Sbjct: 231 AIRMLLVFACFKDFVLYQMDVKSAFLNDFINEEV 264



 Score = 34.7 bits (78), Expect(3) = 9e-07
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -2

Query: 264 ALCDNFWVIVVQKKLD*LERNKV*FLVPKPHDHPFIGIK 148
           AL D  W+I +Q++L+  ER++V  LVP+P +   IG +
Sbjct: 171 ALVDENWMIAMQEELNQFERSEVWELVPRPQNQSVIGTR 209



 Score = 20.4 bits (41), Expect(3) = 9e-07
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 371 PKEQIINDISQGVRT 327
           P+ QII + S GVRT
Sbjct: 132 PQYQIIGNPSSGVRT 146


>emb|CAN62159.1| hypothetical protein VITISV_041771 [Vitis vinifera]
          Length = 460

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 21/36 (58%), Positives = 29/36 (80%)
 Frame = -3

Query: 128 IESIKMLLAFENFKGFKLFQIDVESSFLNCFVKEDV 21
           +E+I+MLL F  FK F L+Q+DV+S+FLN F+ EDV
Sbjct: 339 LEAIRMLLVFACFKDFVLYQMDVKSAFLNGFINEDV 374



 Score = 30.0 bits (66), Expect(2) = 3e-06
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -2

Query: 264 ALCDNFWVIVVQKKLD*LERNKV*FLVPKPHD 169
           AL D  W+I +Q++L+  ER+++  LVP+P +
Sbjct: 281 ALVDENWMISMQEELNQFERSEIWELVPRPQN 312


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