BLASTX nr result

ID: Rauwolfia21_contig00037907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00037907
         (246 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348601.1| PREDICTED: putative late blight resistance p...    57   3e-06
ref|XP_004236955.1| PREDICTED: putative late blight resistance p...    57   3e-06
gb|AAT40487.1| putative disease resistance protein [Solanum demi...    56   4e-06

>ref|XP_006348601.1| PREDICTED: putative late blight resistance protein homolog
            R1B-16-like [Solanum tuberosum]
          Length = 1733

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
 Frame = +1

Query: 1    NLQKLKC----RFNRSCNPLRNCNHF-NVYLLNRLESLNVIFIAGPLN-PCTLSFPSSIR 162
            NL+KL C     F+ S      C  F  +  L+ LES+ ++  + P   P   +FPS ++
Sbjct: 1532 NLRKLSCIFLETFSYSEKLKGRCVLFPRLEFLSHLESVKLVSNSYPSKLPHEFNFPSKLK 1591

Query: 163  KLKLECSHLPWNEISVIGRLPNLEVLKL 246
            +L L    LPW+EIS+IG LPNLE+LKL
Sbjct: 1592 ELTLSKFRLPWSEISIIGELPNLEILKL 1619


>ref|XP_004236955.1| PREDICTED: putative late blight resistance protein homolog
            R1A-10-like [Solanum lycopersicum]
          Length = 1193

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1    NLQKLKCRFNRSCNPLRNCNHFNVY-LLNRLESLNVIFIA-GPLNPCTLSFPSSIRKLKL 174
            NL+KL+C F       +N N F V   L++LE+L V+F+    + P  L+FP +++KL L
Sbjct: 1007 NLRKLRCVFTDLGRWGKNENRFPVLDSLSQLETLKVVFVGISEVGPSRLNFPENLKKLTL 1066

Query: 175  ECSHLPWNEISVIGRLPNLEVLKL 246
                LP  EIS I +L NLEVLKL
Sbjct: 1067 CKFPLPPEEISTIAKLVNLEVLKL 1090


>gb|AAT40487.1| putative disease resistance protein [Solanum demissum]
          Length = 2607

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1    NLQKLKCRFNRSCNPLRNCNHF-NVYLLNRLESLNVIFIAGPLNPCT-LSFPSSIRKLKL 174
            NL KLKC    S    R C     +  L+RLESLN+     P+      +FPS +R+L L
Sbjct: 2327 NLTKLKCIVGCSRKWRRECVLIPRLDFLSRLESLNLFSNNCPVECLRGFNFPSELRELTL 2386

Query: 175  ECSHLPWNEISVIGRLPNLEVLKL 246
                LPW+EIS++G L NLEVLKL
Sbjct: 2387 SNFCLPWSEISIVGTLCNLEVLKL 2410


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