BLASTX nr result

ID: Rauwolfia21_contig00037768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00037768
         (818 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   103   6e-20
ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   100   5e-19
emb|CBI33881.3| unnamed protein product [Vitis vinifera]               85   4e-14
gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus n...    67   1e-08
gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus pe...    65   4e-08

>ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Solanum
           tuberosum]
          Length = 712

 Score =  103 bits (258), Expect = 6e-20
 Identities = 56/107 (52%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
 Frame = +3

Query: 297 EIYREDPPESTFCIPRGHLRSVENVSCKRQLNKDLD-NFEMKQACKFIKKNIGGSRGEKL 473
           EIYREDPP++ + IP GHLR+V  VSCK+QL KDL+ + E KQAC  IKKN+ GSR ++L
Sbjct: 601 EIYREDPPDNDYHIPHGHLRTVGQVSCKKQLQKDLEQDMERKQACSLIKKNMPGSRAQQL 660

Query: 474 MQAMRGPLSEGSTNKKR-----SRNMEDRNTGARRRVSTPFVANTLR 599
           + AM+G  SEGS NK+R     S   +D N  +RRR S   + +T+R
Sbjct: 661 LAAMQGSRSEGSANKRRRGMEVSPTRDDSNPTSRRRSS---IGSTMR 704


>ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Solanum
           lycopersicum]
          Length = 714

 Score =  100 bits (250), Expect = 5e-19
 Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
 Frame = +3

Query: 297 EIYREDPPESTFCIPRGHLRSVENVSCKRQLNKD--LDNFEMKQACKFIKKNIGGSRGEK 470
           EIYREDPP++ + IPRGHLR V  VSCK+QL KD    + E KQAC  IKKN+ GSRG++
Sbjct: 602 EIYREDPPDNDYHIPRGHLRMVGQVSCKKQLQKDDVEQDMERKQACFLIKKNMPGSRGQQ 661

Query: 471 LMQAMRGPLSEGSTNKKRSR-----NMEDRNTGARRRVSTPFVANTLR 599
           L+ AM+G  SEGS  K+R R       +D N+ +RRR S   + +T+R
Sbjct: 662 LLAAMQGLRSEGSAKKRRRRMEVSPTRDDSNSTSRRRSS---IGSTMR 706


>emb|CBI33881.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
 Frame = +3

Query: 297 EIYREDPPESTFCIPRGHLRSVENVSCKRQLNKDLDNFEMKQACKFIKKNIGGSRGEKLM 476
           +IY E+PPE ++ IPRGHLR    V+CK+ LNK L++   ++ACK + KN+  SR  +LM
Sbjct: 415 DIYAEEPPEVSYNIPRGHLRQKNQVACKKPLNKALEDSRKREACK-LCKNMPASRSMRLM 473

Query: 477 QAMRGPLSEGSTNKKRS-RNME-----DRNTGARRR 566
            AM+G  SEGS  KK+S R ME     + NT ARR+
Sbjct: 474 AAMKGSQSEGSLGKKKSKRRMESSANGESNTRARRK 509


>gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus notabilis]
          Length = 667

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = +3

Query: 297 EIYREDPPESTFCIPRGHLRSVENVSCKRQLNKDLDNFEMKQACKFIKKNIGGSRGEKLM 476
           +++  + P  ++ IPR HL+S +  +CKR LNK  D+ E K+A +++ +++  SRG +L+
Sbjct: 560 DVFSFETPGPSYQIPRNHLKSEDQPTCKRLLNKRPDDSETKEAVRYLTRSMPSSRGSRLL 619

Query: 477 QAMRGPLSEGSTNKKRSRNMEDRNTG 554
            AM  P SEG+  KKR      +  G
Sbjct: 620 DAMFRPQSEGAARKKRKFEFPCKGAG 645


>gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus persica]
          Length = 572

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 22/95 (23%)
 Frame = +3

Query: 312 DPPESTFCIPRGHLRSVENVSCKRQL---------------------NKDLDNFEMKQAC 428
           + PE  +C+PR H +SV+NV+CKR L                     N D+D+ +  +A 
Sbjct: 451 ESPEPIYCLPRDHSKSVDNVACKRSLNNIIRSDHLKSADNALCKRPSNNDVDDSKRIEAF 510

Query: 429 KFI-KKNIGGSRGEKLMQAMRGPLSEGSTNKKRSR 530
           +++ KK++   RG +L+ AM GP SEGS+NK+R R
Sbjct: 511 RYLSKKSLTRDRGSQLLAAMVGPQSEGSSNKRRKR 545


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