BLASTX nr result

ID: Rauwolfia21_contig00037537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00037537
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   1e-07
ref|XP_006351939.1| PREDICTED: uncharacterized protein LOC102581...    57   3e-06
gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [...    56   4e-06
gb|EOY18805.1| Ribonuclease H-like protein [Theobroma cacao]           55   1e-05

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
 Frame = -1

Query: 262  WSTVFTFSCWHLWLQKNDSTFRSNRARPLTAQRILSLTVEFSFANVSFVKKGISRT---- 95
            W  VF  SCW LW  +ND  F  N + P+         V F FA V  +K+ + R     
Sbjct: 1143 WLRVFAVSCWWLWRWRNDRCFNRNPSIPIDQ-------VSFIFARVKEIKEAMDRNDTNK 1195

Query: 94   ---------LYIKWNPPSPNSLKLNTDGSAIGNPGLGGVG 2
                     + ++W  P    +KLNTDG++ GNPG  G G
Sbjct: 1196 SQHSGRRKEILVRWQCPKEGWVKLNTDGASKGNPGPAGGG 1235


>ref|XP_006351939.1| PREDICTED: uncharacterized protein LOC102581206 [Solanum tuberosum]
          Length = 307

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
 Frame = -1

Query: 262 WSTVFTFSCWHLWLQKNDSTFRSNRARPLTAQRILSLTVEFSFANVSFVKKGISR--TLY 89
           W   F F+ WH+WL +N++ F ++ + P++   +++ T+E++F    F+    S   T++
Sbjct: 80  WEIYFPFAIWHIWLNRNNNIFHNSNS-PISIPTVIARTLEYAFTG-KFLSSTPSDKITIH 137

Query: 88  IKWNPPSPNSLKLNTDG-----SAIGNPGLGGV 5
            +W PP     KLN DG     S +G  GLGGV
Sbjct: 138 ARWKPPPHGLYKLNFDGFFSAPSLVG--GLGGV 168


>gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [Prunus persica]
          Length = 295

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = -1

Query: 268 VPWSTVFTFSCWHLWLQKNDSTFRSNRARPLTAQRILSLTVEFSFANVSFVKKGISRT-L 92
           +PW  +F F CW++W  +ND  F++    P   + ++    +  F  +     G ++  +
Sbjct: 64  IPWRILFVFICWYIWKWRNDFIFKNETDLPFNPRDLIFTATKDWFQAIFCTSSGANKVQV 123

Query: 91  YIKWNPPSPNSLKLNTDGSAIGNPG---LGGV 5
            + W PP    +KLN DGS  G+ G    GGV
Sbjct: 124 LLAWVPPEIGVVKLNIDGSCRGSTGAIDAGGV 155


>gb|EOY18805.1| Ribonuclease H-like protein [Theobroma cacao]
          Length = 239

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
 Frame = -1

Query: 265 PWSTVFTFSCWHLWLQKNDSTFRSNRARPLTAQRILSLTVEFSFANVSF--------VKK 110
           PWS VF  +CWHLW  +N   F    A  +T +  LSL    + A  +         V++
Sbjct: 51  PWSVVFGLACWHLWKWRNSVVF---NAISITTRNCLSLVRSMATATTTALADFDGVQVER 107

Query: 109 GISRTLYIKWNPPSPNSLKLNTDGS---AIGNPGLGGV 5
           G    + I+W  P    L LNTDG+   +     +GGV
Sbjct: 108 GTKEKILIRWRAPQAGWLSLNTDGAYKKSTDEAAVGGV 145